RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 TOX4O94842 621 aa8.99□□□□□ -0.97
SHMT2-218ENST00000555213 NAPSAO96009 420 aa8.99□□□□□ -0.97
SHMT2-218ENST00000555213 ERP29P30040 261 aaKnown RBP8.99□□□□□ -0.97
SHMT2-218ENST00000555213 CCR6P51684 374 aa8.99□□□□□ -0.97
SHMT2-218ENST00000555213 GNG2P59768 71 aa8.99□□□□□ -0.97
SHMT2-218ENST00000555213 ARL6IP1Q15041 203 aa8.99□□□□□ -0.97
SHMT2-218ENST00000555213 TRIM16LQ309B1 348 aa8.99□□□□□ -0.97
SHMT2-218ENST00000555213 KRBOX4Q5JUW0 171 aa8.99□□□□□ -0.97
SHMT2-218ENST00000555213 FAAP20Q6NZ36 180 aa8.99□□□□□ -0.97
SHMT2-218ENST00000555213 BPIFB2Q8N4F0 458 aa8.99□□□□□ -0.97
SHMT2-218ENST00000555213 LY6G5BQ8NDX9 201 aa8.99□□□□□ -0.97
SHMT2-218ENST00000555213 OR4C16Q8NGL9 310 aa8.99□□□□□ -0.97
SHMT2-218ENST00000555213 NANPQ8TBE9 248 aa8.99□□□□□ -0.97
SHMT2-218ENST00000555213 MAFIPQ8WZ33 124 aa8.99□□□□□ -0.97
SHMT2-218ENST00000555213 DACT3Q96B18 629 aaPredicted RBP8.99□□□□□ -0.97
SHMT2-218ENST00000555213 C7orf50Q9BRJ6 194 aaKnown RBP8.99□□□□□ -0.97
SHMT2-218ENST00000555213 TMPRSS13Q9BYE2 586 aa8.99□□□□□ -0.97
SHMT2-218ENST00000555213 C19orf12Q9NSK7 152 aa8.99□□□□□ -0.97
SHMT2-218ENST00000555213 TAS2R8Q9NYW2 309 aa8.99□□□□□ -0.97
SHMT2-218ENST00000555213 TRGV10A0A0A0MS01 117 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 TMEM30CPA0ZSE6 113 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 ODAMA1E959 279 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 MCRIP1C9JLW8 97 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 M0R1W7 72 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 CSF1P09603 554 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 SRD5A1P18405 259 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 HLA-DMAP28067 261 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 RCVRNP35243 200 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 PAX8Q06710 450 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 ARFRP1Q13795 201 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 STEAP1BQ6NZ63 245 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 MZT2BQ6NZ67 158 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 ZNF880Q6PDB4 577 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 PLPPR1Q8TBJ4 325 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 DEDD2Q8WXF8 326 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 MRGPRFQ96AM1 343 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 SLC6A7Q99884 636 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 MARVELD1Q9BSK0 173 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 PCGF1Q9BSM1 259 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 ST6GALNAC5Q9BVH7 336 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 GAL3ST2Q9H3Q3 398 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 METTL8Q9H825 291 aaKnown RBP8.98□□□□□ -0.97
SHMT2-218ENST00000555213 ING3Q9NXR8 418 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 OR6C3Q9NZP0 311 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 LINC00312Q9Y6C7 94 aa8.98□□□□□ -0.97
SHMT2-218ENST00000555213 MEIKINA0A087WXM9 373 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 TRBV6-6A0A0A6YYG2 114 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 A0A0B4J293 547 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 FAM240BA0A1B0GVZ2 78 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 NAP1L6A6NFF2 107 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 M0QYG6 137 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 RBP4P02753 201 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 TCRBP04435 133 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 FCGR3AP08637 254 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 AKAIN1P0CW23 69 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 DTYMKP23919 212 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 CBX5P45973 191 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 INPP1P49441 399 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 TAS2R19P59542 299 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 ACTBP60709 375 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 ARF6P62330 175 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 ACTG1P63261 375 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 PAX5Q02548 391 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 AESQ08117 197 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 SRSF7Q16629 238 aaKnown RBP eCLIP8.97□□□□□ -0.97
SHMT2-218ENST00000555213 NCR3LG1Q68D85 454 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 TMEM200BQ69YZ2 307 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 Q6ZS49 121 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 C1orf122Q6ZSJ8 110 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 OR56B4Q8NH76 319 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 MRPL30Q8TCC3 161 aaKnown RBP8.97□□□□□ -0.97
SHMT2-218ENST00000555213 UPRTQ96BW1 309 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 ZNF714Q96N38 554 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 CMSS1Q9BQ75 279 aaKnown RBP8.97□□□□□ -0.97
SHMT2-218ENST00000555213 Q9N2K0 584 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 ETAA1Q9NY74 926 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 OPN4Q9UHM6 478 aa8.97□□□□□ -0.97
SHMT2-218ENST00000555213 UBE2J1Q9Y385 318 aaPredicted RBP8.97□□□□□ -0.97
SHMT2-218ENST00000555213 SONP18583 2426 aaKnown RBP8.97□□□□□ -0.97
SHMT2-218ENST00000555213 ZANQ9Y493 2812 aa8.96□□□□□ -0.97
SHMT2-218ENST00000555213 NSD1Q96L73 2696 aaPredicted RBP8.96□□□□□ -0.97
SHMT2-218ENST00000555213 TRAV40A0A0B4J280 105 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 ZNF736B4DX44 427 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-218ENST00000555213 CRLF1O75462 422 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 RAB3DO95716 219 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 PMP2P02689 132 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 ZNF728P0DKX0 622 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 GLP1RP43220 463 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 GLIPR1P48060 266 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 AP3S2P59780 193 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 ERVFRD-1P60508 538 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 ZNF273Q14593 569 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 GPR157Q5UAW9 335 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 ZNF660Q6AZW8 331 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-218ENST00000555213 SLC35E4Q6ICL7 350 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 ZNF497Q6ZNH5 498 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 IL17RELQ6ZVW7 336 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 OVCH2Q7RTZ1 564 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 VMO1Q7Z5L0 202 aa8.96□□□□□ -0.98
SHMT2-218ENST00000555213 TPRX1Q8N7U7 411 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms