RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 IGHV3-43DP0DP04 118 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 TAS2R46P59540 309 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 PAX5Q02548 391 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 GNMTQ14749 295 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 CDK10Q15131 360 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 HMGN3Q15651 99 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 TMEM155Q4W5P6 130 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 VAX1Q5SQQ9 334 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 MED30Q96HR3 178 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 PIMREGQ9BSJ6 248 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 BEX2Q9BXY8 128 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 FAM234AQ9H0X4 552 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 BEX1Q9HBH7 125 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 BARX1Q9HBU1 254 aaPredicted RBP8.88□□□□□ -0.99
TDP1-211ENST00000555178 NUDT15Q9NV35 164 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 CREBBPQ92793 2442 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 FAM172BPA6NC97 362 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 C15orf65H3BRN8 121 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 HBZP02008 142 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 CCL3L1P16619 93 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 FAUP35544 74 aaKnown RBP8.88□□□□□ -0.99
TDP1-211ENST00000555178 BAMBIQ13145 260 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 KCNJ8Q15842 424 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 LRRC10Q5BKY1 277 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 WDR25Q64LD2 544 aaPredicted RBP8.88□□□□□ -0.99
TDP1-211ENST00000555178 Q6ZS49 121 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 LRRC75A-AS1Q8N1F1 130 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 MUC20Q8N307 709 aaPredicted RBP8.88□□□□□ -0.99
TDP1-211ENST00000555178 OR5D13Q8NGL4 314 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 NINJ1Q92982 152 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 C7orf50Q9BRJ6 194 aaKnown RBP8.88□□□□□ -0.99
TDP1-211ENST00000555178 MMP26Q9NRE1 261 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 NECAP2Q9NVZ3 263 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 SLC23A1Q9UHI7 598 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 A0A0B4J293 547 aa8.87□□□□□ -0.99
TDP1-211ENST00000555178 OR5H14A6NHG9 310 aa8.87□□□□□ -0.99
TDP1-211ENST00000555178 MMP23AO75900 390 aa8.87□□□□□ -0.99
TDP1-211ENST00000555178 FSTL3O95633 263 aa8.87□□□□□ -0.99
TDP1-211ENST00000555178 IGHV3-7P01780 117 aa8.87□□□□□ -0.99
TDP1-211ENST00000555178 TCRBP04435 133 aa8.87□□□□□ -0.99
TDP1-211ENST00000555178 IFNA6P05013 189 aa8.87□□□□□ -0.99
TDP1-211ENST00000555178 NPY4RP50391 375 aa8.87□□□□□ -0.99
TDP1-211ENST00000555178 TSPAN5P62079 268 aa8.87□□□□□ -0.99
TDP1-211ENST00000555178 RPL31P62899 125 aaKnown RBP8.87□□□□□ -0.99
TDP1-211ENST00000555178 LCN2P80188 198 aa8.87□□□□□ -0.99
TDP1-211ENST00000555178 MEF2DQ14814 521 aa8.87□□□□□ -0.99
TDP1-211ENST00000555178 AADACL3Q5VUY0 350 aa8.87□□□□□ -0.99
TDP1-211ENST00000555178 ZNF660Q6AZW8 331 aaPredicted RBP8.87□□□□□ -0.99
TDP1-211ENST00000555178 MOB1BQ7L9L4 216 aa8.87□□□□□ -0.99
TDP1-211ENST00000555178 LDLRAD3Q86YD5 345 aa8.87□□□□□ -0.99
TDP1-211ENST00000555178 ARL11Q969Q4 196 aa8.87□□□□□ -0.99
TDP1-211ENST00000555178 GINS4Q9BRT9 223 aa8.87□□□□□ -0.99
TDP1-211ENST00000555178 ZNF2Q9BSG1 426 aaPredicted RBP8.87□□□□□ -0.99
TDP1-211ENST00000555178 C20orf85Q9H1P6 137 aa8.87□□□□□ -0.99
TDP1-211ENST00000555178 DPAGT1Q9H3H5 408 aa8.87□□□□□ -0.99
TDP1-211ENST00000555178 PCDHB10Q9UN67 800 aa8.87□□□□□ -0.99
TDP1-211ENST00000555178 HIVEP1P15822 2718 aa8.87□□□□□ -0.99
TDP1-211ENST00000555178 KIR2DS1A0A191URI9 304 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 NAP1L6A6NFF2 107 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 H7C1Q1 480 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 ARPC1BO15143 372 aaKnown RBP8.86□□□□□ -0.99
TDP1-211ENST00000555178 NDUFA2O43678 99 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 PI3P19957 117 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 TBPP20226 339 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 ERP29P30040 261 aaKnown RBP8.86□□□□□ -0.99
TDP1-211ENST00000555178 FCGR2CP31995 323 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 KIR2DS4P43632 304 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 FXYD4P59646 89 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 KIR2DS1Q14954 304 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 SRSF7Q16629 238 aaKnown RBP eCLIP8.86□□□□□ -0.99
TDP1-211ENST00000555178 C17orf58Q2M2W7 97 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 ACTBL2Q562R1 376 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 BTN2A1Q7KYR7 527 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 FAM185AQ8N0U4 392 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 SPICQ8N5J4 248 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 DUSP18Q8NEJ0 188 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 OR8B3Q8NGG8 313 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 OR52L2PQ8NGH6 319 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 OR10V1Q8NGI7 309 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 NEIL1Q96FI4 390 aaPredicted RBP8.86□□□□□ -0.99
TDP1-211ENST00000555178 OR8B2Q96RD0 313 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 VSIG4Q9Y279 399 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 MXRA5Q9NR99 2828 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 DISC1C4P0D8 188 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 AADACP22760 399 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 PRAMEF5Q5TYX0 476 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 TMEM200BQ69YZ2 307 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 LHFPL1Q86WI0 220 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 TMEM17Q86X19 198 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 OR4A4PQ8NGN8 299 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 MARCH1Q8TCQ1 289 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 LEAP2Q969E1 77 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 CABLES2Q9BTV7 478 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 FXYD6Q9H0Q3 95 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 CALYQ9NYX4 217 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 CLN8Q9UBY8 286 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 MIOXQ9UGB7 285 aa8.86□□□□□ -0.99
TDP1-211ENST00000555178 TRBV6-7A0A0A0MS04 114 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 IGKV1D-13A0A0B4J2D9 117 aa8.85□□□□□ -0.99
TDP1-211ENST00000555178 NDUFB6O95139 128 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms