RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 CST2P09228 141 aa3.48□□□□□ -1.85
VRK1-203ENST00000555067 OR4A8P0C604 315 aa3.48□□□□□ -1.85
VRK1-203ENST00000555067 SCGB1C2P0DMR2 95 aa3.48□□□□□ -1.85
VRK1-203ENST00000555067 IGHV1-8P0DP01 117 aa3.48□□□□□ -1.85
VRK1-203ENST00000555067 CDK9P50750 372 aaKnown RBP3.48□□□□□ -1.85
VRK1-203ENST00000555067 CCR6P51684 374 aa3.48□□□□□ -1.85
VRK1-203ENST00000555067 RAB2AP61019 212 aa3.48□□□□□ -1.85
VRK1-203ENST00000555067 EMX1Q04741 257 aaPredicted RBP3.48□□□□□ -1.85
VRK1-203ENST00000555067 KRR1Q13601 381 aaKnown RBP3.48□□□□□ -1.85
VRK1-203ENST00000555067 PTGES3Q15185 160 aaKnown RBP3.48□□□□□ -1.85
VRK1-203ENST00000555067 ACSBG2Q5FVE4 666 aa3.48□□□□□ -1.85
VRK1-203ENST00000555067 HIST2H3PS2Q5TEC6 136 aa3.48□□□□□ -1.85
VRK1-203ENST00000555067 MARCH3Q86UD3 253 aa3.48□□□□□ -1.85
VRK1-203ENST00000555067 PCP2Q8IVA1 136 aa3.48□□□□□ -1.85
VRK1-203ENST00000555067 SLC25A29Q8N8R3 303 aa3.48□□□□□ -1.85
VRK1-203ENST00000555067 Q8N9W7 124 aa3.48□□□□□ -1.85
VRK1-203ENST00000555067 ZNF555Q8NEP9 628 aa3.48□□□□□ -1.85
VRK1-203ENST00000555067 OR4K5Q8NGD3 323 aa3.48□□□□□ -1.85
VRK1-203ENST00000555067 TEX47Q8TBZ9 253 aa3.48□□□□□ -1.85
VRK1-203ENST00000555067 SCGB1C1Q8TD33 95 aa3.48□□□□□ -1.85
VRK1-203ENST00000555067 Q8WTZ3 238 aa3.48□□□□□ -1.85
VRK1-203ENST00000555067 TMEM109Q9BVC6 243 aa3.48□□□□□ -1.85
VRK1-203ENST00000555067 ZSCAN16Q9H4T2 348 aaPredicted RBP3.48□□□□□ -1.85
VRK1-203ENST00000555067 RPP21Q9H633 154 aaKnown RBP3.48□□□□□ -1.85
VRK1-203ENST00000555067 C11orf49Q9H6J7 331 aa3.48□□□□□ -1.85
VRK1-203ENST00000555067 PDFQ9HBH1 243 aa3.48□□□□□ -1.85
VRK1-203ENST00000555067 SND1-IT1Q9HBX3 110 aa3.48□□□□□ -1.85
VRK1-203ENST00000555067 UBQLN4Q9NRR5 601 aa3.48□□□□□ -1.85
VRK1-203ENST00000555067 C14orf166Q9Y224 244 aaKnown RBP3.48□□□□□ -1.85
VRK1-203ENST00000555067 IGKV1-6A0A0C4DH72 117 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 IGHV3-64DA0A0J9YX35 117 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 C2orf74A8MZ97 194 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 C11orf94C9JXX5 98 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 D6RAR5 112 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 ISLRO14498 428 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 SEC11BP0C7V7 166 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 CD36P16671 472 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 DAD1P61803 113 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 RPL19P84098 196 aaKnown RBP3.47□□□□□ -1.85
VRK1-203ENST00000555067 EDDM3AQ14507 147 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 TMEM97Q5BJF2 176 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 RNASE13Q5GAN3 156 aaKnown RBP3.47□□□□□ -1.85
VRK1-203ENST00000555067 FAM78AQ5JUQ0 283 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 FA2HQ7L5A8 372 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 PDPNQ86YL7 162 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 NATD1Q8N6N6 113 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 LINC01555Q8NAE3 123 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 OR2V1Q8NHB1 315 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 SLC35B4Q969S0 331 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 PHYHIPLQ96FC7 376 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 DERL3Q96Q80 235 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 MED18Q9BUE0 208 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 GNB1LQ9BYB4 327 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 TSGA10Q9BZW7 698 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 TRABDQ9H4I3 376 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 VPREB3Q9UKI3 123 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 CACNG2Q9Y698 323 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 GTF3C1Q12789 2109 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 ROCK1Q13464 1354 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 ARHGAP23Q9P227 1491 aa3.47□□□□□ -1.85
VRK1-203ENST00000555067 A0A087WUJ7 227 aa3.46□□□□□ -1.86
VRK1-203ENST00000555067 ZNF878C9JN71 531 aa3.46□□□□□ -1.86
VRK1-203ENST00000555067 TMEM250H0YL14 139 aa3.46□□□□□ -1.86
VRK1-203ENST00000555067 PLIN3O60664 434 aa3.46□□□□□ -1.86
VRK1-203ENST00000555067 APCSP02743 223 aa3.46□□□□□ -1.86
VRK1-203ENST00000555067 CRYBA1P05813 215 aa3.46□□□□□ -1.86
VRK1-203ENST00000555067 ZNF688P0C7X2 276 aa3.46□□□□□ -1.86
VRK1-203ENST00000555067 ELK4P28324 431 aa3.46□□□□□ -1.86
VRK1-203ENST00000555067 CMC4P56277 68 aaPredicted RBP3.46□□□□□ -1.86
VRK1-203ENST00000555067 TRMT12Q53H54 448 aaKnown RBP3.46□□□□□ -1.86
VRK1-203ENST00000555067 HENMT1Q5T8I9 393 aaKnown RBP3.46□□□□□ -1.86
VRK1-203ENST00000555067 N4BP2L1Q5TBK1 243 aaPredicted RBP3.46□□□□□ -1.86
VRK1-203ENST00000555067 LCN8Q6JVE9 175 aa3.46□□□□□ -1.86
VRK1-203ENST00000555067 Q6ZRU5 148 aa3.46□□□□□ -1.86
VRK1-203ENST00000555067 NTM-AS1Q6ZSK4 140 aa3.46□□□□□ -1.86
VRK1-203ENST00000555067 DOLPP1Q86YN1 238 aa3.46□□□□□ -1.86
VRK1-203ENST00000555067 TMEM256Q8N2U0 113 aa3.46□□□□□ -1.86
VRK1-203ENST00000555067 TBC1D19Q8N5T2 526 aa3.46□□□□□ -1.86
VRK1-203ENST00000555067 OR2M3Q8NG83 312 aa3.46□□□□□ -1.86
VRK1-203ENST00000555067 OR2K2Q8NGT1 345 aa3.46□□□□□ -1.86
VRK1-203ENST00000555067 OR5K1Q8NHB7 308 aa3.46□□□□□ -1.86
VRK1-203ENST00000555067 NIPSNAP1Q9BPW8 284 aa3.46□□□□□ -1.86
VRK1-203ENST00000555067 NANOGQ9H9S0 305 aa3.46□□□□□ -1.86
VRK1-203ENST00000555067 HMG20AQ9NP66 347 aa3.46□□□□□ -1.86
VRK1-203ENST00000555067 TMEM216Q9P0N5 145 aa3.46□□□□□ -1.86
VRK1-203ENST00000555067 PRELID3BQ9Y3B1 194 aa3.46□□□□□ -1.86
VRK1-203ENST00000555067 LTBP1Q14766 1721 aa3.46□□□□□ -1.86
VRK1-203ENST00000555067 ZBED9Q6R2W3 1325 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 ZNF532Q9HCE3 1301 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 ATRNO75882 1429 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 IGHV7-4-1A0A0J9YVY3 117 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 NKX2-6A6NCS4 301 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 COPEO14579 308 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 BPY2O14599 106 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 KLRC4O43908 158 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 IGLV3-25P01717 112 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 SNRPAP09012 282 aaKnown RBP3.45□□□□□ -1.86
VRK1-203ENST00000555067 TMEM33P57088 247 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 ARPC4P59998 168 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 ESRRGP62508 458 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms