RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 ACAA1P09110 424 aaPredicted RBP6.07□□□□□ -1.44
SYNE2-216ENST00000555002 FAM106CPP0CH98 169 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 TMEM33P57088 247 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 RTN4RL1Q86UN2 441 aaPredicted RBP6.07□□□□□ -1.44
SYNE2-216ENST00000555002 OTOSQ8NHW6 89 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 RPS4Y2Q8TD47 263 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 ASB5Q8WWX0 329 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 RNF7Q9UBF6 113 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 SNRPGP15A8MWD9 76 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 DIRC3C9JPN6 131 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 GP2P55259 537 aaKnown RBP6.07□□□□□ -1.44
SYNE2-216ENST00000555002 PPP1R1AQ13522 171 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 BSXQ3C1V8 233 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 SLC25A53Q5H9E4 307 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 TMEM255AQ5JRV8 349 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 Q6ZSR9 355 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 Q9N2K0 584 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 STARD10Q9Y365 291 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 SPG11Q96JI7 2443 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 PPM1DO15297 605 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 SELENOPP49908 381 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 JOSD1Q15040 202 aaPredicted RBP6.07□□□□□ -1.44
SYNE2-216ENST00000555002 CRYBG1Q9Y4K1 1723 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 C16orf97H3BN30 126 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 HIST1H1DP16402 221 aaKnown RBP6.07□□□□□ -1.44
SYNE2-216ENST00000555002 RAB9AP51151 201 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 WDR38Q5JTN6 314 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 PTHLHP12272 177 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 LRRC75BQ2VPJ9 315 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 LAMTOR1Q6IAA8 161 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 ALKBH7Q9BT30 221 aaPredicted RBP6.06□□□□□ -1.44
SYNE2-216ENST00000555002 GLRX2Q9NS18 164 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 FOCADQ5VW36 1801 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 USF3Q68DE3 2245 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 PDCD6O75340 191 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 ATP5G2Q06055 141 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 C11orf87Q6NUJ2 197 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 TMEM183AQ8IXX5 376 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 ZNF418Q8TF45 676 aaPredicted RBP6.06□□□□□ -1.44
SYNE2-216ENST00000555002 CXCL16Q9H2A7 254 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 FUT9Q9Y231 359 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 DOCK1Q14185 1865 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 WNT9BO14905 357 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 DPTQ07507 201 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 UNQ5815/PRO19632Q6UWF5 114 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 MAP6Q96JE9 813 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 ZDHHC8Q9ULC8 765 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 LILRA5A6NI73 299 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 MPV17LQ2QL34 196 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 C2orf83Q53S99 150 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 GPR82Q96P67 336 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 PTPRQQ9UMZ3 2332 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 C4AP0C0L4 1744 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 TMEM101Q96IK0 257 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 ABHD14BQ96IU4 210 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 ZNF665Q9H7R5 613 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 HSPB2A8KAH6 182 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 ZNF253O75346 499 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 FABP2P12104 132 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 CLDN20P56880 219 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 AESQ08117 197 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 HSPB2Q16082 182 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 ZNF658BQ4V348 819 aaPredicted RBP6.06□□□□□ -1.44
SYNE2-216ENST00000555002 PMS2CLQ68D20 193 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 CFAP161Q6P656 301 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 CLEC18BQ6UXF7 455 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 RGP1Q92546 391 aaPredicted RBP6.06□□□□□ -1.44
SYNE2-216ENST00000555002 FGF14Q92915 247 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 RHNO1Q9BSD3 238 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 LRP6O75581 1613 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 TUBGCP6Q96RT7 1819 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 DXOO77932 396 aaKnown RBP6.06□□□□□ -1.44
SYNE2-216ENST00000555002 GPX1P07203 203 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 MRGPRFQ96AM1 343 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 ZP3P21754 424 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 CCR2P41597 374 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 C9orf50Q5SZB4 431 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 LHFPL5Q8TAF8 219 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 NPFFR1Q9GZQ6 430 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 A0A087X0M5 115 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 TRAV21A0A0B4J279 112 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 A0A1B0GX30 115 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 TSPAN2O60636 221 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 MPZL1O95297 269 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 PLP1P60201 277 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 ALKAL1Q6UXT8 129 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 CADM3Q8N126 398 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 NTMQ9P121 344 aa6.06□□□□□ -1.44
SYNE2-216ENST00000555002 RBFOX2O43251 390 aaKnown RBP eCLIP6.05□□□□□ -1.44
SYNE2-216ENST00000555002 EIF3IQ13347 325 aaKnown RBP6.05□□□□□ -1.44
SYNE2-216ENST00000555002 CTF1Q16619 201 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 ZNF880Q6PDB4 577 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 ANKRD33Q7Z3H0 272 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 YIPF6Q96EC8 236 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 RGPD4Q7Z3J3 1758 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 RAC3P60763 192 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 CX3CL1P78423 397 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 FAM53BQ14153 422 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 OR2C3Q8N628 320 aa6.05□□□□□ -1.44
SYNE2-216ENST00000555002 OR4A5Q8NH83 315 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms