RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 TMEM219Q86XT9 240 aa6.03□□□□□ -1.44
LINC00640-201ENST00000554409 THNSL2Q86YJ6 484 aa6.03□□□□□ -1.44
LINC00640-201ENST00000554409 TMEM104Q8NE00 496 aa6.03□□□□□ -1.44
LINC00640-201ENST00000554409 OR6M1Q8NGM8 313 aa6.03□□□□□ -1.44
LINC00640-201ENST00000554409 RFESDQ8TAC1 157 aa6.03□□□□□ -1.44
LINC00640-201ENST00000554409 NEK7Q8TDX7 302 aa6.03□□□□□ -1.44
LINC00640-201ENST00000554409 WIPF2Q8TF74 440 aaPredicted RBP6.03□□□□□ -1.44
LINC00640-201ENST00000554409 TOMM40LQ969M1 308 aa6.03□□□□□ -1.44
LINC00640-201ENST00000554409 AKR1E2Q96JD6 320 aa6.03□□□□□ -1.44
LINC00640-201ENST00000554409 CNBD2Q96M20 576 aa6.03□□□□□ -1.44
LINC00640-201ENST00000554409 MGLLQ99685 303 aa6.03□□□□□ -1.44
LINC00640-201ENST00000554409 MMP27Q9H306 513 aa6.03□□□□□ -1.44
LINC00640-201ENST00000554409 BANF2Q9H503 90 aa6.03□□□□□ -1.44
LINC00640-201ENST00000554409 RAB9BQ9NP90 201 aa6.03□□□□□ -1.44
LINC00640-201ENST00000554409 ETAA1Q9NY74 926 aa6.03□□□□□ -1.44
LINC00640-201ENST00000554409 SIGLEC9Q9Y336 463 aa6.03□□□□□ -1.44
LINC00640-201ENST00000554409 TRAV39A0A0B4J263 110 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 A0A1W2PPI3 338 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 TMEM14DPA8MWL7 114 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 BPNT1O95861 308 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 CHATP28329 748 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 HTR2CP28335 458 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 GNG10P50151 68 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 RPS27AP62979 156 aaKnown RBP6.02□□□□□ -1.45
LINC00640-201ENST00000554409 QRFPP83859 136 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 ZNF816Q0VGE8 651 aaPredicted RBP6.02□□□□□ -1.45
LINC00640-201ENST00000554409 MADCAM1Q13477 382 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 HABP2Q14520 560 aaPredicted RBP6.02□□□□□ -1.45
LINC00640-201ENST00000554409 C2orf68Q2NKX9 166 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 C6orf183Q5T699 404 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 SYT6Q5T7P8 510 aaPredicted RBP6.02□□□□□ -1.45
LINC00640-201ENST00000554409 Q6ZTK2 550 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 ZNF367Q7RTV3 350 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 OR8H3Q8N146 312 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 LINC00311Q8N616 119 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 KLHDC1Q8N7A1 406 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 KCNG3Q8TAE7 436 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 LEAP2Q969E1 77 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 ARL11Q969Q4 196 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 RPEQ96AT9 228 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 RBM14Q96PK6 669 aaKnown RBP6.02□□□□□ -1.45
LINC00640-201ENST00000554409 CITED4Q96RK1 184 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 GFI1Q99684 422 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 SLC25A33Q9BSK2 321 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 TM2D1Q9BX74 207 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 WNT10AQ9GZT5 417 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 CCDC90BQ9GZT6 254 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 MRPL18Q9H0U6 180 aaKnown RBP6.02□□□□□ -1.45
LINC00640-201ENST00000554409 ACOT13Q9NPJ3 140 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 MBNL3Q9NUK0 354 aaKnown RBP6.02□□□□□ -1.45
LINC00640-201ENST00000554409 GFOD1Q9NXC2 390 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 TRAPPC2LQ9UL33 140 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 PEX16Q9Y5Y5 336 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 NBEAL1Q6ZS30 2694 aa6.02□□□□□ -1.45
LINC00640-201ENST00000554409 UBE2QL1A1L167 161 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 C12orf77C9JDV5 145 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 M0QZK8 103 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 SDCBPO00560 298 aaPredicted RBP6.01□□□□□ -1.45
LINC00640-201ENST00000554409 SLC17A2O00624 439 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 HSD17B6O14756 317 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 EREGO14944 169 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 SPINT2O43291 252 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 DENRO43583 198 aaKnown RBP6.01□□□□□ -1.45
LINC00640-201ENST00000554409 MPIG6BO95866 241 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 IGHV3-7P01780 117 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 FAM106CPP0CH98 169 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 CD24P25063 80 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 RANBP1P43487 201 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 MAP2K4P45985 399 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 ZNF137PP52743 207 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 BLCAPP62952 87 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 FABP5Q01469 135 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 EMX1Q04741 257 aaPredicted RBP6.01□□□□□ -1.45
LINC00640-201ENST00000554409 UNC119Q13432 240 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 LTC4SQ16873 150 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 FBLN7Q53RD9 439 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 CD200R1LQ6Q8B3 271 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 SLC25A48Q6ZT89 311 aaKnown RBP6.01□□□□□ -1.45
LINC00640-201ENST00000554409 OR2W3Q7Z3T1 314 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 ZNF439Q8NDP4 499 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 OR10X1Q8NGY0 326 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 OR4K15Q8NH41 348 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 MRPL30Q8TCC3 161 aaKnown RBP6.01□□□□□ -1.45
LINC00640-201ENST00000554409 CCDC107Q8WV48 283 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 TMEM203Q969S6 136 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 FAM46BQ96A09 425 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 TMEM59Q9BXS4 323 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 Q9H521 79 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 NDUFB11Q9NX14 153 aa6.01□□□□□ -1.45
LINC00640-201ENST00000554409 IGHV3-43A0A0B4J1X8 118 aa6□□□□□ -1.45
LINC00640-201ENST00000554409 IGHV1-3A0A0C4DH29 117 aa6□□□□□ -1.45
LINC00640-201ENST00000554409 TXNL1O43396 289 aa6□□□□□ -1.45
LINC00640-201ENST00000554409 FBXO24O75426 580 aa6□□□□□ -1.45
LINC00640-201ENST00000554409 TSPAN15O95858 294 aa6□□□□□ -1.45
LINC00640-201ENST00000554409 HBZP02008 142 aa6□□□□□ -1.45
LINC00640-201ENST00000554409 GAPDHP04406 335 aaKnown RBP6□□□□□ -1.45
LINC00640-201ENST00000554409 AMY1AP04745 511 aa6□□□□□ -1.45
LINC00640-201ENST00000554409 AMY2AP04746 511 aa6□□□□□ -1.45
LINC00640-201ENST00000554409 SNRNP70P08621 437 aaKnown RBP6□□□□□ -1.45
LINC00640-201ENST00000554409 CSF1P09603 554 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms