RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 ATXN7L3Q14CW9 347 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-211ENST00000554310 PAN3Q58A45 887 aaKnown RBP10.6□□□□□ -0.71
SHMT2-211ENST00000554310 KRBOX4Q5JUW0 171 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 LIAT1Q6ZQX7 453 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 LINC00596Q86U02 117 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 DUSP18Q8NEJ0 188 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 SGMS2Q8NHU3 365 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 WFDC12Q8WWY7 111 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 CORO2AQ92828 525 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 COQ2Q96H96 371 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 ABHD1Q96SE0 405 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 SSX3Q99909 188 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 THAP7Q9BT49 309 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-211ENST00000554310 METTL9Q9H1A3 318 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 TMEM133Q9H2Q1 129 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 PCDHB16Q9NRJ7 776 aa10.6□□□□□ -0.71
SHMT2-211ENST00000554310 IGHV2-26A0A0B4J1V2 119 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 TRAV24A0A0B4J272 114 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 LINC00854A0A1B0GVQ3 168 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 BOLA2-SMG1P6H3BVE0 249 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 HTR3BO95264 441 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 CSTBP04080 98 aaKnown RBP10.59□□□□□ -0.71
SHMT2-211ENST00000554310 GLIPR1P48060 266 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 RBM11P57052 281 aaKnown RBP10.59□□□□□ -0.71
SHMT2-211ENST00000554310 PIGYQ3MUY2 71 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 MINOS1Q5TGZ0 78 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 OLFML2AQ68BL7 652 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 OR52W1Q6IF63 320 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 HEPN1Q6WQI6 88 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 CDH26Q8IXH8 852 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 OSR2Q8N2R0 312 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 NKAIN3Q8N8D7 197 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 OR10K1Q8NGX5 313 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 ENKURQ8TC29 256 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 C15orf40Q8WUR7 153 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 SLC25A38Q96DW6 304 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 NKX3-1Q99801 234 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-211ENST00000554310 CLEC7AQ9BXN2 247 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 NCOR1P1Q9H4R4 102 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 IFT22Q9H7X7 185 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 LIN7BQ9HAP6 207 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 RAB18Q9NP72 206 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 OR6C3Q9NZP0 311 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 STEAP1Q9UHE8 339 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 ST3GAL6Q9Y274 331 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 MINOS1-NBL1R4GNA1 71 aa10.59□□□□□ -0.71
SHMT2-211ENST00000554310 MEGF11A6BM72 1044 aa10.58□□□□□ -0.72
SHMT2-211ENST00000554310 ZNF729A6NN14 1252 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-211ENST00000554310 SLC17A2O00624 439 aa10.58□□□□□ -0.72
SHMT2-211ENST00000554310 HSPB6O14558 160 aa10.58□□□□□ -0.72
SHMT2-211ENST00000554310 MAS1P04201 325 aa10.58□□□□□ -0.72
SHMT2-211ENST00000554310 TRAPPC2P0DI81 140 aa10.58□□□□□ -0.72
SHMT2-211ENST00000554310 TRAPPC2BP0DI82 140 aa10.58□□□□□ -0.72
SHMT2-211ENST00000554310 SERPINA2P20848 420 aa10.58□□□□□ -0.72
SHMT2-211ENST00000554310 CDK2P24941 298 aa10.58□□□□□ -0.72
SHMT2-211ENST00000554310 MRPS10P82664 201 aaKnown RBP10.58□□□□□ -0.72
SHMT2-211ENST00000554310 GPR176Q14439 515 aa10.58□□□□□ -0.72
SHMT2-211ENST00000554310 MPV17LQ2QL34 196 aa10.58□□□□□ -0.72
SHMT2-211ENST00000554310 PRAMEF5Q5TYX0 476 aa10.58□□□□□ -0.72
SHMT2-211ENST00000554310 ZNF57Q68EA5 555 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-211ENST00000554310 LHFPL4Q7Z7J7 247 aa10.58□□□□□ -0.72
SHMT2-211ENST00000554310 RTN4RL2Q86UN3 420 aa10.58□□□□□ -0.72
SHMT2-211ENST00000554310 JAGN1Q8N5M9 183 aa10.58□□□□□ -0.72
SHMT2-211ENST00000554310 MALSU1Q96EH3 234 aa10.58□□□□□ -0.72
SHMT2-211ENST00000554310 S100A16Q96FQ6 103 aaKnown RBP10.58□□□□□ -0.72
SHMT2-211ENST00000554310 C7orf50Q9BRJ6 194 aaKnown RBP10.58□□□□□ -0.72
SHMT2-211ENST00000554310 ING4Q9UNL4 249 aa10.58□□□□□ -0.72
SHMT2-211ENST00000554310 PKD1L1Q8TDX9 2849 aa10.57□□□□□ -0.72
SHMT2-211ENST00000554310 TSPAN9O75954 239 aa10.57□□□□□ -0.72
SHMT2-211ENST00000554310 OR7C1O76099 320 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-211ENST00000554310 GTF2F2P13984 249 aa10.57□□□□□ -0.72
SHMT2-211ENST00000554310 CD34P28906 385 aa10.57□□□□□ -0.72
SHMT2-211ENST00000554310 GLP1RP43220 463 aa10.57□□□□□ -0.72
SHMT2-211ENST00000554310 SLC22A6Q4U2R8 563 aa10.57□□□□□ -0.72
SHMT2-211ENST00000554310 RSBN1Q5VWQ0 802 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-211ENST00000554310 GLT8D1Q68CQ7 371 aa10.57□□□□□ -0.72
SHMT2-211ENST00000554310 PLET1Q6UQ28 207 aa10.57□□□□□ -0.72
SHMT2-211ENST00000554310 Q6ZSV7 163 aa10.57□□□□□ -0.72
SHMT2-211ENST00000554310 AKAP14Q86UN6 197 aa10.57□□□□□ -0.72
SHMT2-211ENST00000554310 OR4D6Q8NGJ1 314 aa10.57□□□□□ -0.72
SHMT2-211ENST00000554310 LINC01006Q8NI28 216 aa10.57□□□□□ -0.72
SHMT2-211ENST00000554310 SMIM4Q8WVI0 70 aa10.57□□□□□ -0.72
SHMT2-211ENST00000554310 MRPS24Q96EL2 167 aaKnown RBP10.57□□□□□ -0.72
SHMT2-211ENST00000554310 DPCDQ9BVM2 203 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-211ENST00000554310 C16orf95Q9H693 158 aa10.57□□□□□ -0.72
SHMT2-211ENST00000554310 RANBP3Q9H6Z4 567 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-211ENST00000554310 ING3Q9NXR8 418 aa10.57□□□□□ -0.72
SHMT2-211ENST00000554310 KIF25Q9UIL4 384 aa10.57□□□□□ -0.72
SHMT2-211ENST00000554310 MRPS28Q9Y2Q9 187 aaKnown RBP10.57□□□□□ -0.72
SHMT2-211ENST00000554310 MEIKINA0A087WXM9 373 aa10.56□□□□□ -0.72
SHMT2-211ENST00000554310 A0A087X0M5 115 aa10.56□□□□□ -0.72
SHMT2-211ENST00000554310 FAM240BA0A1B0GVZ2 78 aa10.56□□□□□ -0.72
SHMT2-211ENST00000554310 A0A1B0GX30 115 aa10.56□□□□□ -0.72
SHMT2-211ENST00000554310 GEMIN2O14893 280 aaKnown RBP10.56□□□□□ -0.72
SHMT2-211ENST00000554310 LANCL1O43813 399 aa10.56□□□□□ -0.72
SHMT2-211ENST00000554310 MMP23AO75900 390 aa10.56□□□□□ -0.72
SHMT2-211ENST00000554310 HTR1DP28221 377 aa10.56□□□□□ -0.72
SHMT2-211ENST00000554310 DYNLT3P51808 116 aa10.56□□□□□ -0.72
SHMT2-211ENST00000554310 CLDN12P56749 244 aa10.56□□□□□ -0.72
SHMT2-211ENST00000554310 RAB11BQ15907 218 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms