RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 GSN-AS1Q9NRJ2 163 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 TMEM242Q9NWH2 141 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 TREM2Q9NZC2 230 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 GSKIPQ9P0R6 139 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 VDAC3Q9Y277 283 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 AMDHD2Q9Y303 409 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 FAM96BQ9Y3D0 163 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 LHFPL6Q9Y693 200 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 APCP25054 2843 aa5.07□□□□□ -1.6
VPS33B-203ENST00000554264 ADGRG4Q8IZF6 3080 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 IGLV3-12A0A075B6K2 115 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 A0A0A6YYD4 124 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 NSG1A0A0A6YYJ2 146 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 TRAV1-1A0A0B4J248 108 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 MSGN1A6NI15 193 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 AQP7P3A6NL99 342 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 GJE1A6NN92 205 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 CCL21O00585 134 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 ADAM10O14672 748 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 SOCS1O15524 211 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 PITX3O75364 302 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 DFFBO76075 338 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 OR2C1O95371 312 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 IGHV2-70P01814 119 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 PRH1P02810 166 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 HPNP05981 417 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 GRPP07492 148 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 HOXB5P09067 269 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 CTXN2P0C2S0 81 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 ZNF728P0DKX0 622 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 OR5H8P0DN80 308 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 ZNF43P17038 809 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 MSR1P21757 451 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 ACKR3P25106 362 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 OTX1P32242 354 aaPredicted RBP5.06□□□□□ -1.6
VPS33B-203ENST00000554264 CA7P43166 264 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 OR3A4PP47883 348 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 CDX1P47902 265 aaPredicted RBP5.06□□□□□ -1.6
VPS33B-203ENST00000554264 TDGF1P3P51864 188 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 ARHGDIBP52566 201 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 TMEM50BP56557 158 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 RAB4BP61018 213 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 RND3P61587 244 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 HIST1H3AP68431 136 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 RBPJQ06330 500 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 ZNF616Q08AN1 781 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 FOXO1Q12778 655 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 MIDNQ504T8 468 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 HIKESHIQ53FT3 197 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 GGNBP1Q5YKI7 109 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 ZNF324BQ6AW86 544 aaPredicted RBP5.06□□□□□ -1.6
VPS33B-203ENST00000554264 SLC22A25Q6T423 547 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 TMEM108Q6UXF1 575 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 GFRALQ6UXV0 394 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 LINC00346Q8IVM7 164 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 ZNF100Q8IYN0 542 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 ZNF565Q8N9K5 539 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 OR51F2Q8NH61 342 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 OR14L1PQ8NHC6 308 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 RNASE11Q8TAA1 199 aaKnown RBP5.06□□□□□ -1.6
VPS33B-203ENST00000554264 NANPQ8TBE9 248 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 PGAM5Q96HS1 289 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 CLCC1Q96S66 551 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 MESP1Q9BRJ9 268 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 ZNF2Q9BSG1 426 aaPredicted RBP5.06□□□□□ -1.6
VPS33B-203ENST00000554264 NICN1Q9BSH3 213 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 NAA11Q9BSU3 229 aaPredicted RBP5.06□□□□□ -1.6
VPS33B-203ENST00000554264 ST6GALNAC5Q9BVH7 336 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 ZNF286AQ9HBT8 521 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 SPACA1Q9HBV2 294 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 NIT2Q9NQR4 276 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 PLEKHJ1Q9NW61 149 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 GAR1Q9NY12 217 aaKnown RBP5.06□□□□□ -1.6
VPS33B-203ENST00000554264 C19orf25Q9UFG5 118 aaPredicted RBP5.06□□□□□ -1.6
VPS33B-203ENST00000554264 DIDO1Q9BTC0 2240 aaKnown RBP5.06□□□□□ -1.6
VPS33B-203ENST00000554264 PCSK5Q92824 1860 aa5.06□□□□□ -1.6
VPS33B-203ENST00000554264 PDZD2O15018 2839 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 TRAV17A0A0B4J275 112 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 ZNF732B4DXR9 585 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 H3BMH7 237 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 H3BSH0 61 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 MASP2O00187 686 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 TP53I11O14683 189 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 SMAD9O15198 467 aaKnown RBP5.05□□□□□ -1.6
VPS33B-203ENST00000554264 TRAF3IP2O43734 574 aaPredicted RBP5.05□□□□□ -1.6
VPS33B-203ENST00000554264 RAD51DO75771 328 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 MPZL1O95297 269 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 ONECUT2O95948 504 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 CRYABP02511 175 aaKnown RBP5.05□□□□□ -1.6
VPS33B-203ENST00000554264 UMODP07911 640 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 SNRNP70P08621 437 aaKnown RBP5.05□□□□□ -1.6
VPS33B-203ENST00000554264 WNT2P09544 360 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 OR8U9P0C7N5 309 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 SLC25A6P12236 298 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 GLRA1P23415 457 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 NFYBP25208 207 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 CSNK1A1P48729 337 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 PIGPP57054 158 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 HERV-K104P61576 105 aa5.05□□□□□ -1.6
VPS33B-203ENST00000554264 ARG2P78540 354 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms