RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 CCBE1Q6UXH8 406 aaPredicted RBP8.67□□□□□ -1.02
TMEM55B-205ENST00000554028 BTN2A1Q7KYR7 527 aa8.67□□□□□ -1.02
TMEM55B-205ENST00000554028 RAI1Q7Z5J4 1906 aaPredicted RBP8.67□□□□□ -1.02
TMEM55B-205ENST00000554028 CENPSQ8N2Z9 138 aa8.67□□□□□ -1.02
TMEM55B-205ENST00000554028 OR4D10Q8NGI6 311 aa8.67□□□□□ -1.02
TMEM55B-205ENST00000554028 OR13A1Q8NGR1 328 aa8.67□□□□□ -1.02
TMEM55B-205ENST00000554028 GIMAP1Q8WWP7 306 aa8.67□□□□□ -1.02
TMEM55B-205ENST00000554028 MBD6Q96DN6 1003 aa8.67□□□□□ -1.02
TMEM55B-205ENST00000554028 ZNF2Q9BSG1 426 aaPredicted RBP8.67□□□□□ -1.02
TMEM55B-205ENST00000554028 SSBP3Q9BWW4 388 aaPredicted RBP8.67□□□□□ -1.02
TMEM55B-205ENST00000554028 SLC2A8Q9NY64 477 aa8.67□□□□□ -1.02
TMEM55B-205ENST00000554028 CALYQ9NYX4 217 aa8.67□□□□□ -1.02
TMEM55B-205ENST00000554028 DUX4Q9UBX2 424 aa8.67□□□□□ -1.02
TMEM55B-205ENST00000554028 ZNF69Q9UC07 566 aa8.67□□□□□ -1.02
TMEM55B-205ENST00000554028 SLC23A1Q9UHI7 598 aa8.67□□□□□ -1.02
TMEM55B-205ENST00000554028 RBM7Q9Y580 266 aaKnown RBP8.67□□□□□ -1.02
TMEM55B-205ENST00000554028 CACNA1DQ01668 2161 aa8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 LOC105371242A0A075B767 164 aa8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 TRBV6-7A0A0A0MS04 114 aa8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 NDUFB6O95139 128 aa8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 DHFRP00374 187 aa8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 ZNF735P0CB33 412 aa8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 PGAM2P15259 253 aa8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 CEACAM6P40199 344 aa8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 HTD2P86397 168 aa8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 LCE2AQ5TA79 106 aaPredicted RBP8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 TMEM200BQ69YZ2 307 aa8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 C11orf88Q6PI97 169 aa8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 ZNF841Q6ZN19 808 aa8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 OR10A7Q8NGE5 316 aa8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 OR1L1Q8NH94 360 aa8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 RFESDQ8TAC1 157 aa8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 ZFAND1Q8TCF1 268 aa8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 CREB3L1Q96BA8 519 aa8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 ZNF714Q96N38 554 aa8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 DCTN5Q9BTE1 182 aa8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 CABLES2Q9BTV7 478 aa8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 OR2S2Q9NQN1 319 aa8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 GNG12Q9UBI6 72 aa8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 DSCAMO60469 2012 aa8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 CHD3Q12873 2000 aaKnown RBP8.66□□□□□ -1.02
TMEM55B-205ENST00000554028 PPIAL4CA0A0B4J2A2 164 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 NPIPB11E5RHQ5 1161 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 F5H0A9 414 aaPredicted RBP8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 INMT-MINDY4F8WBC2 141 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 C15orf65H3BRN8 121 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 FOXH1O75593 365 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 IGHV2-5P01817 119 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 RLN1P04808 185 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 LIPFP07098 398 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 H2AFB2P0C5Z0 115 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 ZNF728P0DKX0 622 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 PPIAL4GP0DN37 164 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 NFYAP23511 347 aaPredicted RBP8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 FPR2P25090 351 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 S100GP29377 79 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 SSTR5P35346 364 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 SURF2Q15527 256 aaPredicted RBP8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 LTC4SQ16873 150 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 PLA1AQ53H76 456 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 Q6ZPA2 131 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 ZDHHC22Q8N966 263 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 CLDND2Q8NHS1 167 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 EDARADDQ8WWZ3 215 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 DMRTB1Q96MA1 342 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 C19orf12Q9NSK7 152 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 NUDT15Q9NV35 164 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 IDI2-AS1Q9NZ38 188 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 RPUSD1Q9UJJ7 312 aaKnown RBP8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 JPT1Q9UK76 154 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 C14orf166Q9Y224 244 aaKnown RBP8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 COL12A1Q99715 3063 aa8.65□□□□□ -1.02
TMEM55B-205ENST00000554028 USP9YO00507 2555 aaPredicted RBP8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 TRAV6A0A075B6T7 132 aa8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 MEX3AA1L020 520 aaKnown RBP8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 VWC2LB2RUY7 222 aa8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 F2RL2O00254 374 aa8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 ENSAO43768 121 aaKnown RBP8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 PPYP01298 95 aa8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 CGB3P0DN86 165 aa8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 CGB7P0DN87 165 aa8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 USF1P22415 310 aaPredicted RBP8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 NFYBP25208 207 aa8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 BTCP35070 178 aa8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 LUMP51884 338 aaPredicted RBP8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 RAG2P55895 527 aa8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 FXYD4P59646 89 aa8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 PRSS57Q6UWY2 283 aa8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 FGFRL1Q8N441 504 aa8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 OR52L2PQ8NGH6 319 aa8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 OR52M1Q8NGK5 317 aa8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 C8orf46Q8TAG6 207 aa8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 UBALD1Q8TB05 177 aa8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 FAM216AQ8WUB2 273 aa8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 TOMM40LQ969M1 308 aa8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 DACT3Q96B18 629 aaPredicted RBP8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 MARVELD1Q9BSK0 173 aa8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 TMPRSS13Q9BYE2 586 aa8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 C20orf85Q9H1P6 137 aa8.64□□□□□ -1.03
TMEM55B-205ENST00000554028 MMP28Q9H239 520 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms