RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 SUN5Q8TC36 379 aa7.23□□□□□ -1.25
TDP1-208ENST00000553989 RGP1Q92546 391 aaPredicted RBP7.23□□□□□ -1.25
TDP1-208ENST00000553989 TMEM106AQ96A25 262 aa7.23□□□□□ -1.25
TDP1-208ENST00000553989 SPSB4Q96A44 273 aa7.23□□□□□ -1.25
TDP1-208ENST00000553989 FAM3DQ96BQ1 224 aa7.23□□□□□ -1.25
TDP1-208ENST00000553989 PGAM5Q96HS1 289 aa7.23□□□□□ -1.25
TDP1-208ENST00000553989 RTL8AQ9BWD3 113 aa7.23□□□□□ -1.25
TDP1-208ENST00000553989 FAM234AQ9H0X4 552 aa7.23□□□□□ -1.25
TDP1-208ENST00000553989 OR10A2Q9H208 303 aa7.23□□□□□ -1.25
TDP1-208ENST00000553989 SLC25A10Q9UBX3 287 aaPredicted RBP7.23□□□□□ -1.25
TDP1-208ENST00000553989 KLK11Q9UBX7 282 aa7.23□□□□□ -1.25
TDP1-208ENST00000553989 GLS2Q9UI32 602 aa7.23□□□□□ -1.25
TDP1-208ENST00000553989 ZNF391Q9UJN7 358 aa7.23□□□□□ -1.25
TDP1-208ENST00000553989 DHDHQ9UQ10 334 aa7.23□□□□□ -1.25
TDP1-208ENST00000553989 TET2Q6N021 2002 aaPredicted RBP7.23□□□□□ -1.25
TDP1-208ENST00000553989 TRAV18A0A075B6X5 111 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 hCG_38984A0A1B0GV85 526 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 MCRIP1C9JLW8 97 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 ANGPTL7O43827 346 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 PRB2P02812 416 aaPredicted RBP7.22□□□□□ -1.25
TDP1-208ENST00000553989 TFF1P04155 84 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 MAS1P04201 325 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 FSTP19883 344 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 RAB6AP20340 208 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 GABRA2P47869 451 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 VEGFCP49767 419 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 ZNF121P58317 390 aaPredicted RBP7.22□□□□□ -1.25
TDP1-208ENST00000553989 MEF2DQ14814 521 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 RNASE12Q5GAN4 147 aaKnown RBP7.22□□□□□ -1.25
TDP1-208ENST00000553989 STUMQ69YW2 141 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 SIGIRRQ6IA17 410 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 C1orf122Q6ZSJ8 110 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 CATSPERDQ86XM0 798 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.22□□□□□ -1.25
TDP1-208ENST00000553989 C11orf53Q8IXP5 236 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 FAM185AQ8N0U4 392 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 PRSS35Q8N3Z0 413 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 TMEM185AQ8NFB2 350 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 BEST4Q8NFU0 473 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 OR52H1Q8NGJ2 320 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 OR2T6Q8NHC8 308 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 GPX8Q8TED1 209 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 TSEN15Q8WW01 171 aaKnown RBP7.22□□□□□ -1.25
TDP1-208ENST00000553989 SGK3Q96BR1 496 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 SSX3Q99909 188 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 METTL8Q9H825 291 aaKnown RBP7.22□□□□□ -1.25
TDP1-208ENST00000553989 RAB22AQ9UL26 194 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 HHLA2Q9UM44 414 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 SIGLEC9Q9Y336 463 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 RHBDD3Q9Y3P4 386 aa7.22□□□□□ -1.25
TDP1-208ENST00000553989 A0A0D9SG52 128 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 TMEM210A6NLX4 147 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 ZNF850A8MQ14 1090 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 DISC1C4P0D8 188 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.21□□□□□ -1.26
TDP1-208ENST00000553989 M0R1W7 72 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 LPLP06858 475 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 H2BFMP0C1H6 154 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 VSIG10L2P0DP72 767 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 RRASP10301 218 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 GTF2F2P13984 249 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 IGFBP3P17936 291 aaPredicted RBP7.21□□□□□ -1.26
TDP1-208ENST00000553989 GLRA1P23415 457 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 MPZP25189 248 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 HTR2CP28335 458 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 S100A11P31949 105 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 UBE2E1P51965 193 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 CLDN12P56749 244 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 ZP1P60852 638 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 PRDX4Q13162 271 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 C1orf100Q5SVJ3 147 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 HIST2H2BDQ6DRA6 164 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 LIN54Q6MZP7 749 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 STEAP1BQ6NZ63 245 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 LPCAT3Q6P1A2 487 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 TMEM65Q6PI78 240 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 KLHDC1Q8N7A1 406 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 Q8N7P7 452 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 NKAIN3Q8N8D7 197 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 BEND2Q8NDZ0 799 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 C8orf46Q8TAG6 207 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 PIGCQ92535 297 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 GAFA1Q96PS6 74 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 HIST1H2AAQ96QV6 131 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 NKX3-1Q99801 234 aaPredicted RBP7.21□□□□□ -1.26
TDP1-208ENST00000553989 GINS4Q9BRT9 223 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 TTTY10Q9BZA0 68 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 DNTTIP1Q9H147 329 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 ATG5Q9H1Y0 275 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 WDR13Q9H1Z4 485 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 RGCCQ9H4X1 137 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 AUNIPQ9H7T9 357 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 ELL3Q9HB65 397 aaPredicted RBP7.21□□□□□ -1.26
TDP1-208ENST00000553989 RAB18Q9NP72 206 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 PIPOXQ9P0Z9 390 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 FBLN5Q9UBX5 448 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 FLVCR2Q9UPI3 526 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 KLHDC2Q9Y2U9 406 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 MPC1Q9Y5U8 109 aa7.21□□□□□ -1.26
TDP1-208ENST00000553989 SESN1Q9Y6P5 492 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms