RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 KRBOX4Q5JUW0 171 aa12□□□□□ -0.49
SHMT2-208ENST00000553868 C6orf183Q5T699 404 aa12□□□□□ -0.49
SHMT2-208ENST00000553868 RSBN1Q5VWQ0 802 aaPredicted RBP12□□□□□ -0.49
SHMT2-208ENST00000553868 ZNF880Q6PDB4 577 aa12□□□□□ -0.49
SHMT2-208ENST00000553868 Q6ZNX1 250 aa12□□□□□ -0.49
SHMT2-208ENST00000553868 ZNF554Q86TJ5 538 aa12□□□□□ -0.49
SHMT2-208ENST00000553868 OR56B4Q8NH76 319 aa12□□□□□ -0.49
SHMT2-208ENST00000553868 PLPPR1Q8TBJ4 325 aa12□□□□□ -0.49
SHMT2-208ENST00000553868 MAFIPQ8WZ33 124 aa12□□□□□ -0.49
SHMT2-208ENST00000553868 CREB3L1Q96BA8 519 aa12□□□□□ -0.49
SHMT2-208ENST00000553868 SLC25A21Q9BQT8 299 aaPredicted RBP12□□□□□ -0.49
SHMT2-208ENST00000553868 TINAGL1Q9GZM7 467 aaPredicted RBP12□□□□□ -0.49
SHMT2-208ENST00000553868 NCOR1P1Q9H4R4 102 aa12□□□□□ -0.49
SHMT2-208ENST00000553868 DCAF16Q9NXF7 216 aa12□□□□□ -0.49
SHMT2-208ENST00000553868 EHFQ9NZC4 300 aa12□□□□□ -0.49
SHMT2-208ENST00000553868 MEIKINA0A087WXM9 373 aa11.99□□□□□ -0.49
SHMT2-208ENST00000553868 ZNF205O95201 554 aa11.99□□□□□ -0.49
SHMT2-208ENST00000553868 TCRBP04435 133 aa11.99□□□□□ -0.49
SHMT2-208ENST00000553868 COL8A2P25067 703 aa11.99□□□□□ -0.49
SHMT2-208ENST00000553868 TMEM33P57088 247 aa11.99□□□□□ -0.49
SHMT2-208ENST00000553868 HLA-DRB3P79483 266 aa11.99□□□□□ -0.49
SHMT2-208ENST00000553868 RBMS2Q15434 407 aaKnown RBP11.99□□□□□ -0.49
SHMT2-208ENST00000553868 BTN2A1Q7KYR7 527 aa11.99□□□□□ -0.49
SHMT2-208ENST00000553868 TMEM185AQ8NFB2 350 aa11.99□□□□□ -0.49
SHMT2-208ENST00000553868 OR4D10Q8NGI6 311 aa11.99□□□□□ -0.49
SHMT2-208ENST00000553868 OR51S1Q8NGJ8 323 aa11.99□□□□□ -0.49
SHMT2-208ENST00000553868 C10orf105Q8TEF2 133 aa11.99□□□□□ -0.49
SHMT2-208ENST00000553868 FAM168AQ92567 244 aa11.99□□□□□ -0.49
SHMT2-208ENST00000553868 GAFA1Q96PS6 74 aa11.99□□□□□ -0.49
SHMT2-208ENST00000553868 CCL13Q99616 98 aa11.99□□□□□ -0.49
SHMT2-208ENST00000553868 RAB9BQ9NP90 201 aa11.99□□□□□ -0.49
SHMT2-208ENST00000553868 MBNL3Q9NUK0 354 aaKnown RBP11.99□□□□□ -0.49
SHMT2-208ENST00000553868 KAAG1Q9UBP8 84 aa11.99□□□□□ -0.49
SHMT2-208ENST00000553868 METRNQ9UJH8 293 aa11.99□□□□□ -0.49
SHMT2-208ENST00000553868 TMEM89A2RUT3 159 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 FABP7O15540 132 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 ADAM20O43506 726 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 NDUFB3O43676 98 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 LY6HO94772 140 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 NDUFB6O95139 128 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 DIRAS3O95661 229 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 TGFAP01135 160 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 OR5H8P0DN80 308 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 SPNP16150 400 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 ERP29P30040 261 aaKnown RBP11.98□□□□□ -0.49
SHMT2-208ENST00000553868 ECI1P42126 302 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 CCR6P51684 374 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 P2RX3P56373 397 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 DSCR9P59020 149 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 AESQ08117 197 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 EDDM3AQ14507 147 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 SCGB2B2Q4G0G5 96 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 LRRC10Q5BKY1 277 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 FAAP20Q6NZ36 180 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 IDO2Q6ZQW0 420 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 OVCH2Q7RTZ1 564 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 ZNRF1Q8ND25 227 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 OR4A4PQ8NGN8 299 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 OR6F1Q8NGZ6 308 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 COQ2Q96H96 371 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 CYYR1Q96J86 154 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 SCGB3A2Q96PL1 93 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 SLC6A7Q99884 636 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 ING3Q9NXR8 418 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 OR6C3Q9NZP0 311 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 KIF25Q9UIL4 384 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 MAB21L2Q9Y586 359 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 TANC2Q9HCD6 1990 aa11.98□□□□□ -0.49
SHMT2-208ENST00000553868 WNK1Q9H4A3 2382 aa11.97□□□□□ -0.49
SHMT2-208ENST00000553868 ARFGEF3Q5TH69 2177 aa11.97□□□□□ -0.49
SHMT2-208ENST00000553868 PPIHO43447 177 aaKnown RBP11.97□□□□□ -0.49
SHMT2-208ENST00000553868 DHFRP00374 187 aa11.97□□□□□ -0.49
SHMT2-208ENST00000553868 IGHV2-70P01814 119 aa11.97□□□□□ -0.49
SHMT2-208ENST00000553868 TFF1P04155 84 aa11.97□□□□□ -0.49
SHMT2-208ENST00000553868 ZNF735P0CB33 412 aa11.97□□□□□ -0.49
SHMT2-208ENST00000553868 GZMHP20718 246 aa11.97□□□□□ -0.49
SHMT2-208ENST00000553868 SRP14P37108 136 aaKnown RBP11.97□□□□□ -0.49
SHMT2-208ENST00000553868 RAG2P55895 527 aa11.97□□□□□ -0.49
SHMT2-208ENST00000553868 TMEM155Q4W5P6 130 aa11.97□□□□□ -0.49
SHMT2-208ENST00000553868 SPICQ8N5J4 248 aa11.97□□□□□ -0.49
SHMT2-208ENST00000553868 CCDC107Q8WV48 283 aa11.97□□□□□ -0.49
SHMT2-208ENST00000553868 TMEM246Q9BRR3 403 aa11.97□□□□□ -0.49
SHMT2-208ENST00000553868 GINS4Q9BRT9 223 aa11.97□□□□□ -0.49
SHMT2-208ENST00000553868 MARVELD1Q9BSK0 173 aa11.97□□□□□ -0.49
SHMT2-208ENST00000553868 NUDT15Q9NV35 164 aa11.97□□□□□ -0.49
SHMT2-208ENST00000553868 OPN4Q9UHM6 478 aa11.97□□□□□ -0.49
SHMT2-208ENST00000553868 IGKV1D-8A0A087WSZ0 117 aa11.96□□□□□ -0.49
SHMT2-208ENST00000553868 ODAMA1E959 279 aa11.96□□□□□ -0.49
SHMT2-208ENST00000553868 INMT-MINDY4F8WBC2 141 aa11.96□□□□□ -0.49
SHMT2-208ENST00000553868 LYNX1G3V0Z9 82 aa11.96□□□□□ -0.49
SHMT2-208ENST00000553868 TNFRSF13BO14836 293 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-208ENST00000553868 H2AFB2P0C5Z0 115 aa11.96□□□□□ -0.49
SHMT2-208ENST00000553868 GSTT2P0CG29 244 aa11.96□□□□□ -0.49
SHMT2-208ENST00000553868 LYNX1P0DP58 116 aa11.96□□□□□ -0.49
SHMT2-208ENST00000553868 RCC1P18754 421 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-208ENST00000553868 RBMXP38159 391 aaKnown RBP11.96□□□□□ -0.49
SHMT2-208ENST00000553868 GLIPR1P48060 266 aa11.96□□□□□ -0.49
SHMT2-208ENST00000553868 EDDM3BP56851 147 aa11.96□□□□□ -0.49
SHMT2-208ENST00000553868 SEC61A1P61619 476 aaKnown RBP11.96□□□□□ -0.49
SHMT2-208ENST00000553868 HMGN3Q15651 99 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms