RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 ZNF845Q96IR2 970 aaPredicted RBP4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 BTF3L4Q96K17 158 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 ALKBH3Q96Q83 286 aaPredicted RBP4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 HIST1H2BNQ99877 126 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 HIST1H2BMQ99879 126 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 RARRES2Q99969 163 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 PYGO2Q9BRQ0 406 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 C20orf24Q9BUV8 137 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 PARP12Q9H0J9 701 aaKnown RBP4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 CDH20Q9HBT6 801 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 LIN7CQ9NUP9 197 aaKnown RBP4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 ZNF581Q9P0T4 197 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 DOK5Q9P104 306 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 VAX2Q9UIW0 290 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 OR2W1Q9Y3N9 320 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 MPC1Q9Y5U8 109 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 LIPGQ9Y5X9 500 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 CUL9Q8IWT3 2517 aa4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 RANBP2P49792 3224 aaKnown RBP4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 NCOA6Q14686 2063 aaPredicted RBP4.49□□□□□ -1.69
TMEM55B-204ENST00000553602 CEP192Q8TEP8 1941 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 LAMA3Q16787 3333 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 SPAG17Q6Q759 2223 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 TMEM265A0A087WTH1 108 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 IGHV3-15A0A0B4J1V0 119 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 TRAV20A0A0B4J274 112 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 IGKV1D-13A0A0B4J2D9 117 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 IGKV1-6A0A0C4DH72 117 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 OR5H1A6NKK0 313 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 RNF212BA8MTL3 300 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 H0YL77 283 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 J3QT63 122 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 IGKV1-13P0DP09 117 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 DAOP14920 347 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 ITGA3P26006 1051 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 ARR3P36575 388 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 CEACAM6P40199 344 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 FOLR3P41439 243 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 DUSP3P51452 185 aaPredicted RBP4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 GFRA1P56159 465 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 SSTP61278 116 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 PKIAP61925 76 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 CCL20P78556 96 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 ZFP36L1Q07352 338 aaKnown RBP4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 PRDX4Q13162 271 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 TGIF1Q15583 401 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 HAGHQ16775 308 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 LRRC75BQ2VPJ9 315 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 TMEM249Q2WGJ8 235 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 AKIRIN2Q53H80 203 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 IGSF11Q5DX21 431 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 OR2B11Q5JQS5 317 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 CXorf66Q5JRM2 361 aaPredicted RBP4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 LYSMD4Q5XG99 296 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 ZNF324BQ6AW86 544 aaPredicted RBP4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 CLEC9AQ6UXN8 241 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 Q6ZS46 218 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 MRPL21Q7Z2W9 205 aaKnown RBP4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 ZNF573Q86YE8 665 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 CALHM1Q8IU99 346 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 Q8IYB0 196 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 HIST3H2BBQ8N257 126 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 ZNF525Q8N782 197 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 TCTEX1D1Q8N7M0 179 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 ZFP62Q8NB50 900 aaPredicted RBP4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 OR56B2PQ8NGI1 322 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 OR10D3Q8NH80 312 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 MRPL30Q8TCC3 161 aaKnown RBP4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 CA5BP1Q8WTZ4 195 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 PIGCQ92535 297 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 DYRK2Q92630 601 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 SLAMF9Q96A28 289 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 FAM210BQ96KR6 192 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 PFDN5Q99471 154 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 SRD5A3Q9H8P0 318 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 CHODLQ9H9P2 273 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 CALHM2Q9HA72 323 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 SDF2L1Q9HCN8 221 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 GFOD1Q9NXC2 390 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 P4HTMQ9NXG6 502 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 PITPNC1Q9UKF7 332 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 CA14Q9ULX7 337 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 SEC16AO15027 2179 aa4.48□□□□□ -1.69
TMEM55B-204ENST00000553602 EML6Q6ZMW3 1958 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 B4E171 279 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 TRAPPC2LH3BP13 241 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 MKRN2OSH3BPM6 223 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 DVL1O14640 695 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 SYNGR2O43760 224 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 CHST1O43916 411 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 CXCL13O43927 109 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 CST7O76096 145 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 VENTXO95231 258 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 MBP02144 154 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 TYMSP04818 313 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 SERPINE2P07093 398 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 CXCL1P09341 107 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 SCTP09683 121 aa4.47□□□□□ -1.69
TMEM55B-204ENST00000553602 CD99P14209 185 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms