RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 Q8TCH9 128 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 GLYATL2Q8WU03 294 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 MRPL24Q96A35 216 aaKnown RBP6.15□□□□□ -1.42
ATXN3-221ENST00000553498 GALMQ96C23 342 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 MSI2Q96DH6 328 aaKnown RBP6.15□□□□□ -1.42
ATXN3-221ENST00000553498 C18orf12Q96KH6 178 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 ARPC5LQ9BPX5 153 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 SLC5A7Q9GZV3 580 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 SLC25A32Q9H2D1 315 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 LIME1Q9H400 295 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 FAM212BQ9NTI7 297 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-221ENST00000553498 ASF1BQ9NVP2 202 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 LUZP4Q9P127 313 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 IL36RNQ9UBH0 155 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 DUSP13Q9UII6 198 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 AUP1Q9Y679 476 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 ALPK2Q86TB3 2170 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 IGKV1-6A0A0C4DH72 117 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 TMEM8BA6NDV4 472 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 E5RGE8 158 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 SIRPB1O00241 398 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 HSPB6O14558 160 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 MGST3O14880 152 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 SMAD7O15105 426 aaKnown RBP6.14□□□□□ -1.43
ATXN3-221ENST00000553498 PHF1O43189 567 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-221ENST00000553498 ADAP1O75689 374 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 ATG12O94817 140 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 LHBP01229 141 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 HEXAP06865 529 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 HOXB5P09067 269 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 OR5AC1P0C628 307 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 MMP9P14780 707 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 TNFRSF1AP19438 455 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 PRDX2P32119 198 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 CA7P43166 264 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 ASCL1P50553 236 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 HTD2P86397 168 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 HERPUD1Q15011 391 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 TESK1Q15569 626 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 IGFBP7Q16270 282 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 CR1LQ2VPA4 569 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 GPR157Q5UAW9 335 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 GGNBP1Q5YKI7 109 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 ZNF695Q8IW36 515 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 SLC7A5P1Q8MH63 180 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 OR8H3Q8N146 312 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 FAM71E2Q8N5Q1 922 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 OR10V1Q8NGI7 309 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 OR11L1Q8NGX0 322 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 LRRC29Q8WV35 223 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 DCUN1D4Q92564 292 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 NINJ1Q92982 152 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 OR10C1Q96KK4 312 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 SNX22Q96L94 193 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 RNF126Q9BV68 326 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 SHARPINQ9H0F6 387 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 FAM234AQ9H0X4 552 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 ESRP2Q9H6T0 727 aaKnown RBP6.14□□□□□ -1.43
ATXN3-221ENST00000553498 TAF9BQ9HBM6 251 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 MSL2Q9HCI7 577 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 LIN7CQ9NUP9 197 aaKnown RBP6.14□□□□□ -1.43
ATXN3-221ENST00000553498 C19orf73Q9NVV2 129 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 RDH8Q9NYR8 311 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 MBD2Q9UBB5 411 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 NSG2Q9Y328 171 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 UBE2J1Q9Y385 318 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-221ENST00000553498 RNF114Q9Y508 228 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-221ENST00000553498 PTPRBP23467 1997 aa6.14□□□□□ -1.43
ATXN3-221ENST00000553498 hCG_1807616A0A1W2PRN6 198 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 ZSCAN5BA6NJL1 495 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 LRRC30A6NM36 301 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 ATP6V1G2-DDX39BF2Z307 99 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 ST8SIA3O43173 380 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 SPINT2O43291 252 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 HSPA12AO43301 675 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 PGLYRP1O75594 196 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-221ENST00000553498 DEDDO75618 318 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 TPT1P13693 172 aaKnown RBP6.13□□□□□ -1.43
ATXN3-221ENST00000553498 IRF2P14316 349 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 MUC1P15941 1255 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-221ENST00000553498 RCC1P18754 421 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-221ENST00000553498 PVALBP20472 110 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-221ENST00000553498 VDAC1P21796 283 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 F2RP25116 425 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 CHRNB4P30926 498 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 CCKARP32238 428 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 LRRC37A5PQ49AS3 106 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 PHLDA2Q53GA4 152 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 PRAMEF6Q5VXH4 476 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 THOC7Q6I9Y2 204 aaKnown RBP6.13□□□□□ -1.43
ATXN3-221ENST00000553498 ZNF818PQ6ZRF7 136 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 TBC1D26Q86UD7 250 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 PDZD9Q8IXQ8 264 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 BATF2Q8N1L9 274 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 ZNF561Q8N587 486 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 RELL2Q8NC24 303 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-221ENST00000553498 PLPPR1Q8TBJ4 325 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 FAM222BQ8WU58 562 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 SECTM1Q8WVN6 248 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms