RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 VDAC1P21796 283 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 PRKACGP22612 351 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 PRKACBP22694 351 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 MTCP1P56278 107 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 ZP1P60852 638 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 ACTR3P61158 418 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 EFNB1P98172 346 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 NXNL2Q5VZ03 156 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 SLC16A12Q6ZSM3 486 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 DHFR2Q86XF0 187 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 RDH10Q8IZV5 341 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 YIPF7Q8N8F6 280 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 OR10A7Q8NGE5 316 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 OR5D18Q8NGL1 313 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 OR2T10Q8NGZ9 312 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 PLPPR1Q8TBJ4 325 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 DLX4Q92988 240 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-219ENST00000553488 ST6GALNAC6Q969X2 333 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 SPSB1Q96BD6 273 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 OPALINQ96PE5 141 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 SPACA5Q96QH8 159 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 S1PR3Q99500 378 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 RHOFQ9HBH0 211 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 NDE1Q9NXR1 346 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 VSIG4Q9Y279 399 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 FAT2Q9NYQ8 4349 aa5.6□□□□□ -1.51
ATXN3-219ENST00000553488 DYNC1H1Q14204 4646 aaKnown RBP5.6□□□□□ -1.51
ATXN3-219ENST00000553488 MEIKINA0A087WXM9 373 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 A0A1W2PQL4 384 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-219ENST00000553488 MAGEA13PA6NCF6 341 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 FAM90A10PA6NDY2 464 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 ZNF736B4DX44 427 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-219ENST00000553488 HSPB6O14558 160 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 SNX3O60493 162 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 SULT1C4O75897 302 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 MOSP00540 346 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 SERPINA3P01011 423 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 MT-ND2P03891 347 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 GAPDHP04406 335 aaKnown RBP5.59□□□□□ -1.51
ATXN3-219ENST00000553488 OR5H8P0DN80 308 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 ANXA8P13928 327 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 CD1BP29016 333 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 HTR1FP30939 366 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 SOX6P35712 828 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 CRISP1P54107 249 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 F2RL1P55085 397 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 SCAND1P57086 179 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 SCN1BQ07699 218 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 BNIP1Q12981 228 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 SRSF7Q16629 238 aaKnown RBP eCLIP5.59□□□□□ -1.51
ATXN3-219ENST00000553488 LTC4SQ16873 150 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 ACSM6Q6P461 480 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 MOB3BQ86TA1 216 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 LYPD6Q86Y78 171 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 SAXO1Q8IYX7 474 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 LINC00311Q8N616 119 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 ZBTB34Q8NCN2 500 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 OR6Q1Q8NGQ2 317 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 OR10X1Q8NGY0 326 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 RFESDQ8TAC1 157 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 MRGPRDQ8TDS7 321 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 RTN4IP1Q8WWV3 396 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-219ENST00000553488 ARPC1AQ92747 370 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 OR5B12Q96R08 314 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 MBOAT4Q96T53 435 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 TBX5Q99593 518 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 CHCHD6Q9BRQ6 235 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 TEX12Q9BXU0 123 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 ALX4Q9H161 411 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-219ENST00000553488 ZNF556Q9HAH1 456 aa5.59□□□□□ -1.51
ATXN3-219ENST00000553488 DNAH2Q9P225 4427 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 IGHV4OR15-8A0A075B7B6 117 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 A0A087WW49 117 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 TRAV39A0A0B4J263 110 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 METTL15A6NJ78 407 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 G3V318 75 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 H0YJX3 145 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 DEGS1O15121 323 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 ATP6V0E1O15342 81 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 GYPEP15421 78 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 EPHA2P29317 976 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 VHLP40337 213 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 ZNF137PP52743 207 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 GABPB1Q06547 395 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-219ENST00000553488 PTGES3Q15185 160 aaKnown RBP5.58□□□□□ -1.52
ATXN3-219ENST00000553488 PAN3Q58A45 887 aaKnown RBP5.58□□□□□ -1.52
ATXN3-219ENST00000553488 C12orf73Q69YU5 71 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 ELP2Q6IA86 826 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 FAHD1Q6P587 224 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 HAPLN4Q86UW8 402 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 ARHGAP24Q8N264 748 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 TCEANCQ8N8B7 351 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 C8orf31Q8N9H6 132 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 ZNF565Q8N9K5 539 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 OR8H1Q8NGG4 311 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 OR51A4Q8NGJ6 313 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 OR13C9Q8NGT0 318 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 OR10AC1Q8NH08 325 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 CNIH3Q8TBE1 160 aa5.58□□□□□ -1.52
ATXN3-219ENST00000553488 TMEM163Q8TC26 289 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms