RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 OR13C5Q8NGS8 318 aa10.09□□□□□ -0.79
LINC00643-202ENST00000553426 MUL1Q969V5 352 aa10.09□□□□□ -0.79
LINC00643-202ENST00000553426 EAF1Q96JC9 268 aaPredicted RBP10.09□□□□□ -0.79
LINC00643-202ENST00000553426 OR14A2Q96R54 314 aa10.09□□□□□ -0.79
LINC00643-202ENST00000553426 ETAA1Q9NY74 926 aa10.09□□□□□ -0.79
LINC00643-202ENST00000553426 ZNF581Q9P0T4 197 aa10.09□□□□□ -0.79
LINC00643-202ENST00000553426 IGHV3-43A0A0B4J1X8 118 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 IGHV3-72A0A0B4J1Y9 119 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 A0A1W2PP11 408 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 MYL12BO14950 172 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 RRP9O43818 475 aaKnown RBP10.08□□□□□ -0.8
LINC00643-202ENST00000553426 CA11O75493 328 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 MOSP00540 346 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 LALBAP00709 142 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 MAS1P04201 325 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 IGHV3-43DP0DP04 118 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 FSTP19883 344 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 MAPK3P27361 379 aaPredicted RBP10.08□□□□□ -0.8
LINC00643-202ENST00000553426 CD1BP29016 333 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 CAPGP40121 348 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 MYCNOSP40205 109 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 THBS3P49746 956 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 SYT6Q5T7P8 510 aaPredicted RBP10.08□□□□□ -0.8
LINC00643-202ENST00000553426 RAB12Q6IQ22 244 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 UNQ9370/PRO34162Q6UXP9 181 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 OR2W3Q7Z3T1 314 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 MRPL41Q8IXM3 137 aaKnown RBP10.08□□□□□ -0.8
LINC00643-202ENST00000553426 LINC00482Q8N8I6 264 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 ZFP41Q8N8Y5 198 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 KLHL30-AS1Q8NEE0 82 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 OR8H1Q8NGG4 311 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 UBALD1Q8TB05 177 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 RTN4IP1Q8WWV3 396 aaPredicted RBP10.08□□□□□ -0.8
LINC00643-202ENST00000553426 GGHQ92820 318 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 RASL11BQ9BPW5 248 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 LIN7CQ9NUP9 197 aaKnown RBP10.08□□□□□ -0.8
LINC00643-202ENST00000553426 LINC00527Q9UJ94 153 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 PEX16Q9Y5Y5 336 aa10.08□□□□□ -0.8
LINC00643-202ENST00000553426 TRAV8-7A0A075B6U6 113 aa10.07□□□□□ -0.8
LINC00643-202ENST00000553426 PNMA8CA0A1B0GUJ8 204 aa10.07□□□□□ -0.8
LINC00643-202ENST00000553426 A0A1W2PPK0 400 aa10.07□□□□□ -0.8
LINC00643-202ENST00000553426 FAM90A10PA6NDY2 464 aa10.07□□□□□ -0.8
LINC00643-202ENST00000553426 FAM90A7PA6NKC0 464 aa10.07□□□□□ -0.8
LINC00643-202ENST00000553426 FAM90A23PA8MXZ1 464 aa10.07□□□□□ -0.8
LINC00643-202ENST00000553426 C12orf77C9JDV5 145 aa10.07□□□□□ -0.8
LINC00643-202ENST00000553426 CRTAPO75718 401 aaPredicted RBP10.07□□□□□ -0.8
LINC00643-202ENST00000553426 GLAP06280 429 aa10.07□□□□□ -0.8
LINC00643-202ENST00000553426 CELP19835 753 aa10.07□□□□□ -0.8
LINC00643-202ENST00000553426 FUT3P21217 361 aa10.07□□□□□ -0.8
LINC00643-202ENST00000553426 GP2P55259 537 aaKnown RBP10.07□□□□□ -0.8
LINC00643-202ENST00000553426 RPS11P62280 158 aaKnown RBP eCLIP10.07□□□□□ -0.8
LINC00643-202ENST00000553426 DCTN2Q13561 401 aaKnown RBP10.07□□□□□ -0.8
LINC00643-202ENST00000553426 DOC2BQ14184 412 aa10.07□□□□□ -0.8
LINC00643-202ENST00000553426 PNLIPRP3Q17RR3 467 aa10.07□□□□□ -0.8
LINC00643-202ENST00000553426 CXorf66Q5JRM2 361 aaPredicted RBP10.07□□□□□ -0.8
LINC00643-202ENST00000553426 STEAP3Q658P3 488 aa10.07□□□□□ -0.8
LINC00643-202ENST00000553426 C8orf86Q6ZUL3 223 aa10.07□□□□□ -0.8
LINC00643-202ENST00000553426 ZNF695Q8IW36 515 aa10.07□□□□□ -0.8
LINC00643-202ENST00000553426 C8orf59Q8N0T1 100 aaPredicted RBP10.07□□□□□ -0.8
LINC00643-202ENST00000553426 PRR18Q8N4B5 295 aa10.07□□□□□ -0.8
LINC00643-202ENST00000553426 NKAIN3Q8N8D7 197 aa10.07□□□□□ -0.8
LINC00643-202ENST00000553426 PGLYRP3Q96LB9 341 aa10.07□□□□□ -0.8
LINC00643-202ENST00000553426 SELENOIQ9C0D9 397 aa10.07□□□□□ -0.8
LINC00643-202ENST00000553426 ABCG5Q9H222 651 aa10.07□□□□□ -0.8
LINC00643-202ENST00000553426 KCNIP1Q9NZI2 227 aa10.07□□□□□ -0.8
LINC00643-202ENST00000553426 CNOT2Q9NZN8 540 aaKnown RBP10.07□□□□□ -0.8
LINC00643-202ENST00000553426 RCC2Q9P258 522 aaKnown RBP10.07□□□□□ -0.8
LINC00643-202ENST00000553426 TRBV5-7A0A0A0MS05 114 aa10.06□□□□□ -0.8
LINC00643-202ENST00000553426 MAGEA13PA6NCF6 341 aa10.06□□□□□ -0.8
LINC00643-202ENST00000553426 K7EIL1 84 aa10.06□□□□□ -0.8
LINC00643-202ENST00000553426 MGMTP16455 207 aa10.06□□□□□ -0.8
LINC00643-202ENST00000553426 GPR12P47775 334 aa10.06□□□□□ -0.8
LINC00643-202ENST00000553426 WNT4P56705 351 aa10.06□□□□□ -0.8
LINC00643-202ENST00000553426 ADARB1P78563 741 aaKnown RBP10.06□□□□□ -0.8
LINC00643-202ENST00000553426 EGFEM1PQ0D2K5 195 aa10.06□□□□□ -0.8
LINC00643-202ENST00000553426 SLC25A48Q6ZT89 311 aaKnown RBP10.06□□□□□ -0.8
LINC00643-202ENST00000553426 OR10V1Q8NGI7 309 aa10.06□□□□□ -0.8
LINC00643-202ENST00000553426 OR4K15Q8NH41 348 aa10.06□□□□□ -0.8
LINC00643-202ENST00000553426 S1PR3Q99500 378 aa10.06□□□□□ -0.8
LINC00643-202ENST00000553426 UQCC2Q9BRT2 126 aa10.06□□□□□ -0.8
LINC00643-202ENST00000553426 CST11Q9H112 138 aa10.06□□□□□ -0.8
LINC00643-202ENST00000553426 BANF2Q9H503 90 aa10.06□□□□□ -0.8
LINC00643-202ENST00000553426 OR2S2Q9NQN1 319 aa10.06□□□□□ -0.8
LINC00643-202ENST00000553426 GHRLQ9UBU3 117 aa10.06□□□□□ -0.8
LINC00643-202ENST00000553426 ERGIC3Q9Y282 383 aa10.06□□□□□ -0.8
LINC00643-202ENST00000553426 DNAH9Q9NYC9 4486 aa10.05□□□□□ -0.8
LINC00643-202ENST00000553426 HBZP02008 142 aa10.05□□□□□ -0.8
LINC00643-202ENST00000553426 CD1AP06126 327 aa10.05□□□□□ -0.8
LINC00643-202ENST00000553426 VDAC1P21796 283 aa10.05□□□□□ -0.8
LINC00643-202ENST00000553426 HOXD3P31249 432 aaPredicted RBP10.05□□□□□ -0.8
LINC00643-202ENST00000553426 SOX6P35712 828 aa10.05□□□□□ -0.8
LINC00643-202ENST00000553426 KRTAP10-11P60412 298 aa10.05□□□□□ -0.8
LINC00643-202ENST00000553426 GPR50Q13585 617 aa10.05□□□□□ -0.8
LINC00643-202ENST00000553426 ZNF554Q86TJ5 538 aa10.05□□□□□ -0.8
LINC00643-202ENST00000553426 Q8N6K4 173 aa10.05□□□□□ -0.8
LINC00643-202ENST00000553426 ZNF485Q8NCK3 441 aa10.05□□□□□ -0.8
LINC00643-202ENST00000553426 ST6GALNAC6Q969X2 333 aa10.05□□□□□ -0.8
LINC00643-202ENST00000553426 DERL3Q96Q80 235 aa10.05□□□□□ -0.8
LINC00643-202ENST00000553426 VCXQ9H320 206 aa10.05□□□□□ -0.8
LINC00643-202ENST00000553426 UBE2QL1A1L167 161 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms