RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 ZNF580Q9UK33 172 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 OR52A1Q9UKL2 312 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 RAB21Q9UL25 225 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 COPS3Q9UNS2 423 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 MRPS28Q9Y2Q9 187 aaKnown RBP4.09□□□□□ -1.75
HOXB3-213ENST00000552000 MEIKINA0A087WXM9 373 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 TRAV39A0A0B4J263 110 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 TRAV41A0A0B4J266 112 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 FAM90A10PA6NDY2 464 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 HMX3A6NHT5 357 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 DHRS7CA6NNS2 312 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 H3BN98 237 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 SLC33A1O00400 549 aaPredicted RBP4.08□□□□□ -1.76
HOXB3-213ENST00000552000 HSPB6O14558 160 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 NDUFAB1O14561 156 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 ZNF254O75437 659 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 E2F6O75461 281 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 SRSF10O75494 262 aaKnown RBP4.08□□□□□ -1.76
HOXB3-213ENST00000552000 GATBO75879 557 aaKnown RBP4.08□□□□□ -1.76
HOXB3-213ENST00000552000 CYB5AP00167 134 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 CSN2P05814 226 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 MALP21145 153 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 CD1BP29016 333 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 BLVRBP30043 206 aaPredicted RBP4.08□□□□□ -1.76
HOXB3-213ENST00000552000 SSTR5P35346 364 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 ATP1B3P54709 279 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 PSME3P61289 254 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 ROM1Q03395 351 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 ECSCRQ19T08 205 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 Q6P435 159 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 TMEM104Q8NE00 496 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 OR8H1Q8NGG4 311 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 MRGPRDQ8TDS7 321 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 RAB24Q969Q5 203 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 RFT1Q96AA3 541 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 FLYWCH2Q96CP2 140 aaKnown RBP4.08□□□□□ -1.76
HOXB3-213ENST00000552000 APOL4Q9BPW4 351 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 DGCR6LQ9BY27 220 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 CHST5Q9GZS9 411 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 COMMD4Q9H0A8 199 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 MOB1AQ9H8S9 216 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 PLEKHA1Q9HB21 404 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 LRP1BQ9NZR2 4599 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 ABCD2Q9UBJ2 740 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 KIF25Q9UIL4 384 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 R4GMQ9 66 aa4.08□□□□□ -1.76
HOXB3-213ENST00000552000 FLG2Q5D862 2391 aaPredicted RBP4.07□□□□□ -1.76
HOXB3-213ENST00000552000 IGHV7-81A0A0B4J1V7 117 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 IGKV1-12A0A0C4DH73 117 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 A0A1W2PN81 502 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 IZUMO1RA6ND01 250 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 NUPR2A6NF83 97 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 H0Y980 276 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 DEGS1O15121 323 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 SYT7O43581 403 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 SOX15O60248 233 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 ACTL6BO94805 426 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 RGS11O94810 467 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 IGKV1D-12P01611 117 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 HSPB1P04792 205 aaKnown RBP4.07□□□□□ -1.76
HOXB3-213ENST00000552000 CCL1P22362 96 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 SLC2A5P22732 501 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 C21orf33P30042 268 aaPredicted RBP4.07□□□□□ -1.76
HOXB3-213ENST00000552000 HTR1FP30939 366 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 CHRNA7P36544 502 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 MAGEA2P43356 314 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 RBP2P50120 134 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 CCR9P51686 369 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 MTCP1P56278 107 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 APOFQ13790 326 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 GINS1Q14691 196 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 MMDQ15546 238 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 SLC35D3Q5M8T2 416 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 STEAP3Q658P3 488 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 CEMP1Q6PRD7 247 aaPredicted RBP4.07□□□□□ -1.76
HOXB3-213ENST00000552000 ZNF322Q6U7Q0 402 aaPredicted RBP4.07□□□□□ -1.76
HOXB3-213ENST00000552000 HACD2Q6Y1H2 254 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 LINC00322Q6ZN03 302 aaPredicted RBP4.07□□□□□ -1.76
HOXB3-213ENST00000552000 Q6ZSR3 168 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 TMEM179BQ7Z7N9 219 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 YIPF7Q8N8F6 280 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 ZNF565Q8N9K5 539 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 MINDY2Q8NBR6 621 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 CHST4Q8NCG5 386 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 OR51T1Q8NGJ9 327 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 UBALD1Q8TB05 177 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 RTN4IP1Q8WWV3 396 aaPredicted RBP4.07□□□□□ -1.76
HOXB3-213ENST00000552000 ASB17Q8WXJ9 295 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 ATP6V1G3Q96LB4 118 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 NSMCE2Q96MF7 247 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 MBOAT4Q96T53 435 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 NIPSNAP1Q9BPW8 284 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 THAP7Q9BT49 309 aaPredicted RBP4.07□□□□□ -1.76
HOXB3-213ENST00000552000 LINC00574Q9H8X3 128 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 GORASP2Q9H8Y8 452 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 EFCAB1Q9HAE3 211 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 A3GALT2U3KPV4 340 aa4.07□□□□□ -1.76
HOXB3-213ENST00000552000 AGRNO00468 2067 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 IGHV3-43A0A0B4J1X8 118 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 IGKV1-9A0A0C4DH69 117 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms