RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 MELTFP08582 738 aa12.3□□□□□ -0.44
SMARCD1-211ENST00000551497 IGHV3-43DP0DP04 118 aa12.3□□□□□ -0.44
SMARCD1-211ENST00000551497 LGALS4P56470 323 aa12.3□□□□□ -0.44
SMARCD1-211ENST00000551497 LOXL3P58215 753 aa12.3□□□□□ -0.44
SMARCD1-211ENST00000551497 SPCS2Q15005 226 aa12.3□□□□□ -0.44
SMARCD1-211ENST00000551497 FAM189A2Q15884 450 aa12.3□□□□□ -0.44
SMARCD1-211ENST00000551497 CDNFQ49AH0 187 aa12.3□□□□□ -0.44
SMARCD1-211ENST00000551497 C6orf183Q5T699 404 aa12.3□□□□□ -0.44
SMARCD1-211ENST00000551497 DTX3Q8N9I9 347 aa12.3□□□□□ -0.44
SMARCD1-211ENST00000551497 CMSS1Q9BQ75 279 aaKnown RBP12.3□□□□□ -0.44
SMARCD1-211ENST00000551497 KCNIP1Q9NZI2 227 aa12.3□□□□□ -0.44
SMARCD1-211ENST00000551497 PSG11Q9UQ72 335 aa12.3□□□□□ -0.44
SMARCD1-211ENST00000551497 A0A0A6YYJ9 748 aa12.29□□□□□ -0.44
SMARCD1-211ENST00000551497 A0A1W2PPE3 182 aa12.29□□□□□ -0.44
SMARCD1-211ENST00000551497 DNAJC9-AS1A6NH13 148 aa12.29□□□□□ -0.44
SMARCD1-211ENST00000551497 F2RL2O00254 374 aa12.29□□□□□ -0.44
SMARCD1-211ENST00000551497 SDCBPO00560 298 aaPredicted RBP12.29□□□□□ -0.44
SMARCD1-211ENST00000551497 HOXA3O43365 443 aaPredicted RBP12.29□□□□□ -0.44
SMARCD1-211ENST00000551497 HIST1H1DP16402 221 aaKnown RBP12.29□□□□□ -0.44
SMARCD1-211ENST00000551497 CD34P28906 385 aa12.29□□□□□ -0.44
SMARCD1-211ENST00000551497 RORCP51449 518 aa12.29□□□□□ -0.44
SMARCD1-211ENST00000551497 TMBIM6P55061 237 aa12.29□□□□□ -0.44
SMARCD1-211ENST00000551497 SCAND1P57086 179 aa12.29□□□□□ -0.44
SMARCD1-211ENST00000551497 SLC9A3R2Q15599 337 aa12.29□□□□□ -0.44
SMARCD1-211ENST00000551497 ZNF880Q6PDB4 577 aa12.29□□□□□ -0.44
SMARCD1-211ENST00000551497 OR10A7Q8NGE5 316 aa12.29□□□□□ -0.44
SMARCD1-211ENST00000551497 RIMS4Q9H426 269 aaPredicted RBP12.29□□□□□ -0.44
SMARCD1-211ENST00000551497 TRBV6-6A0A0A6YYG2 114 aa12.28□□□□□ -0.44
SMARCD1-211ENST00000551497 TOR1AO14656 332 aa12.28□□□□□ -0.44
SMARCD1-211ENST00000551497 SPINT2O43291 252 aa12.28□□□□□ -0.44
SMARCD1-211ENST00000551497 TMEM127O75204 238 aa12.28□□□□□ -0.44
SMARCD1-211ENST00000551497 IGLV1-47P01700 117 aa12.28□□□□□ -0.44
SMARCD1-211ENST00000551497 IGHV4-59P01825 116 aa12.28□□□□□ -0.44
SMARCD1-211ENST00000551497 FBP1P09467 338 aa12.28□□□□□ -0.44
SMARCD1-211ENST00000551497 CD3GP09693 182 aa12.28□□□□□ -0.44
SMARCD1-211ENST00000551497 GNG10P50151 68 aa12.28□□□□□ -0.44
SMARCD1-211ENST00000551497 PRRX1P54821 245 aa12.28□□□□□ -0.44
SMARCD1-211ENST00000551497 HMGN3Q15651 99 aa12.28□□□□□ -0.44
SMARCD1-211ENST00000551497 SSX2Q16385 188 aa12.28□□□□□ -0.44
SMARCD1-211ENST00000551497 IZUMO1Q8IYV9 350 aa12.28□□□□□ -0.44
SMARCD1-211ENST00000551497 SAMD12Q8N8I0 201 aa12.28□□□□□ -0.44
SMARCD1-211ENST00000551497 OR52L2PQ8NGH6 319 aa12.28□□□□□ -0.44
SMARCD1-211ENST00000551497 OR4P4Q8NGL7 312 aa12.28□□□□□ -0.44
SMARCD1-211ENST00000551497 Q9N2K0 584 aa12.28□□□□□ -0.44
SMARCD1-211ENST00000551497 HILPDAQ9Y5L2 63 aa12.28□□□□□ -0.44
SMARCD1-211ENST00000551497 CEPT1Q9Y6K0 416 aa12.28□□□□□ -0.44
SMARCD1-211ENST00000551497 TRAV18A0A075B6X5 111 aa12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 J3QR06 171 aa12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 SCTP09683 121 aa12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 HTR1DP28221 377 aa12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 IER3P46695 156 aa12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 RAB13P51153 203 aa12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 UBA52P62987 128 aaKnown RBP12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 ARFRP1Q13795 201 aa12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 ZNF260Q3ZCT1 412 aa12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 PLA1AQ53H76 456 aa12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 TRAT1Q6PIZ9 186 aa12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 BEND2Q8NDZ0 799 aa12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 OR10V1Q8NGI7 309 aa12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 OR52M1Q8NGK5 317 aa12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 OR9G1Q8NH87 305 aa12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 ZNF596Q8TC21 504 aa12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 RAB2BQ8WUD1 216 aa12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 KCTD12Q96CX2 325 aaKnown RBP12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 MALSU1Q96EH3 234 aa12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 JMJD8Q96S16 334 aa12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 MEGF9Q9H1U4 602 aa12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 C12orf4Q9NQ89 552 aa12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 OR2S2Q9NQN1 319 aa12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 GFOD1Q9NXC2 390 aa12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 COMMD3Q9UBI1 195 aa12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 ZNF230Q9UIE0 474 aaPredicted RBP12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 TBL2Q9Y4P3 447 aaKnown RBP12.27□□□□□ -0.45
SMARCD1-211ENST00000551497 CUBNO60494 3623 aa12.26□□□□□ -0.45
SMARCD1-211ENST00000551497 TMEM235A6NFC5 223 aa12.26□□□□□ -0.45
SMARCD1-211ENST00000551497 SERPINE3A8MV23 424 aa12.26□□□□□ -0.45
SMARCD1-211ENST00000551497 LY6LH3BQJ8 138 aa12.26□□□□□ -0.45
SMARCD1-211ENST00000551497 BUB1B-PAK6H3BSN5 160 aa12.26□□□□□ -0.45
SMARCD1-211ENST00000551497 ZNF134P52741 427 aa12.26□□□□□ -0.45
SMARCD1-211ENST00000551497 GNMTQ14749 295 aa12.26□□□□□ -0.45
SMARCD1-211ENST00000551497 HLA-DRB5Q30154 266 aa12.26□□□□□ -0.45
SMARCD1-211ENST00000551497 KRTAP24-1Q3LI83 254 aa12.26□□□□□ -0.45
SMARCD1-211ENST00000551497 ZNF554Q86TJ5 538 aa12.26□□□□□ -0.45
SMARCD1-211ENST00000551497 LDLRAD3Q86YD5 345 aa12.26□□□□□ -0.45
SMARCD1-211ENST00000551497 MAFIPQ8WZ33 124 aa12.26□□□□□ -0.45
SMARCD1-211ENST00000551497 PHF21AQ96BD5 680 aa12.26□□□□□ -0.45
SMARCD1-211ENST00000551497 ISOC1Q96CN7 298 aa12.26□□□□□ -0.45
SMARCD1-211ENST00000551497 MDFIQ99750 246 aa12.26□□□□□ -0.45
SMARCD1-211ENST00000551497 SSX3Q99909 188 aa12.26□□□□□ -0.45
SMARCD1-211ENST00000551497 ABCG5Q9H222 651 aa12.26□□□□□ -0.45
SMARCD1-211ENST00000551497 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.26□□□□□ -0.45
SMARCD1-211ENST00000551497 DPM3Q9P2X0 92 aa12.26□□□□□ -0.45
SMARCD1-211ENST00000551497 GNG12Q9UBI6 72 aa12.26□□□□□ -0.45
SMARCD1-211ENST00000551497 H3BMQ9 156 aa12.25□□□□□ -0.45
SMARCD1-211ENST00000551497 SLC31A2O15432 143 aa12.25□□□□□ -0.45
SMARCD1-211ENST00000551497 SSX5O60225 188 aa12.25□□□□□ -0.45
SMARCD1-211ENST00000551497 EIF4EP06730 217 aaKnown RBP12.25□□□□□ -0.45
SMARCD1-211ENST00000551497 FCGR3AP08637 254 aa12.25□□□□□ -0.45
SMARCD1-211ENST00000551497 PTHLHP12272 177 aa12.25□□□□□ -0.45
SMARCD1-211ENST00000551497 ZNF182P17025 639 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms