RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 H0YJX3 145 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 HSPB6O14558 160 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 APOL3O95236 402 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 CNIH1O95406 144 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 IGHV3-11P01762 117 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 PRKACGP22612 351 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 CHRNA7P36544 502 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 PMS2P11Q13670 270 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 PAN3Q58A45 887 aaKnown RBP9.06□□□□□ -0.96
PTCH1-222ENST00000551425 LGALS9CQ6DKI2 356 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 LCN12Q6JVE5 192 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 PYHIN1Q6K0P9 492 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 SLC35F2Q8IXU6 374 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 HS3ST5Q8IZT8 346 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 RDH10Q8IZV5 341 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 Q8N402 240 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 TCTEX1D1Q8N7M0 179 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 CASTOR1Q8WTX7 329 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 DNAJC9Q8WXX5 260 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 RFT1Q96AA3 541 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 ADAT3Q96EY9 351 aaPredicted RBP9.06□□□□□ -0.96
PTCH1-222ENST00000551425 RHOVQ96L33 236 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 OPALINQ96PE5 141 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 C9orf16Q9BUW7 83 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 GABARAPL1Q9H0R8 117 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 CST11Q9H112 138 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 OAZ3Q9UMX2 235 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 ERGIC3Q9Y282 383 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 SAC3D1A6NKF1 404 aa9.05□□□□□ -0.96
PTCH1-222ENST00000551425 ZNF670-ZNF695F2Z2N8 137 aa9.05□□□□□ -0.96
PTCH1-222ENST00000551425 RPP14O95059 124 aaKnown RBP9.05□□□□□ -0.96
PTCH1-222ENST00000551425 GZMHP20718 246 aa9.05□□□□□ -0.96
PTCH1-222ENST00000551425 ZP3P21754 424 aa9.05□□□□□ -0.96
PTCH1-222ENST00000551425 KCNJ3P48549 501 aa9.05□□□□□ -0.96
PTCH1-222ENST00000551425 LSAMPQ13449 338 aa9.05□□□□□ -0.96
PTCH1-222ENST00000551425 RIPK1Q13546 671 aa9.05□□□□□ -0.96
PTCH1-222ENST00000551425 KLF5Q13887 457 aaPredicted RBP9.05□□□□□ -0.96
PTCH1-222ENST00000551425 ECSCRQ19T08 205 aa9.05□□□□□ -0.96
PTCH1-222ENST00000551425 Q3ZCU0 254 aa9.05□□□□□ -0.96
PTCH1-222ENST00000551425 FAHD1Q6P587 224 aa9.05□□□□□ -0.96
PTCH1-222ENST00000551425 SLC25A48Q6ZT89 311 aaKnown RBP9.05□□□□□ -0.96
PTCH1-222ENST00000551425 OR5D18Q8NGL1 313 aa9.05□□□□□ -0.96
PTCH1-222ENST00000551425 CNIH3Q8TBE1 160 aa9.05□□□□□ -0.96
PTCH1-222ENST00000551425 PLPPR1Q8TBJ4 325 aa9.05□□□□□ -0.96
PTCH1-222ENST00000551425 ANKRD60Q9BZ19 345 aa9.05□□□□□ -0.96
PTCH1-222ENST00000551425 PLEKHA3Q9HB20 300 aa9.05□□□□□ -0.96
PTCH1-222ENST00000551425 FAM118AQ9NWS6 357 aa9.05□□□□□ -0.96
PTCH1-222ENST00000551425 GFOD1Q9NXC2 390 aa9.05□□□□□ -0.96
PTCH1-222ENST00000551425 SIGLEC8Q9NYZ4 499 aa9.05□□□□□ -0.96
PTCH1-222ENST00000551425 TRAV39A0A0B4J263 110 aa9.04□□□□□ -0.96
PTCH1-222ENST00000551425 LOC107986453A0A1B0GWG9 222 aa9.04□□□□□ -0.96
PTCH1-222ENST00000551425 C15orf65H3BRN8 121 aa9.04□□□□□ -0.96
PTCH1-222ENST00000551425 SDCBPO00560 298 aaPredicted RBP9.04□□□□□ -0.96
PTCH1-222ENST00000551425 MT-ND2P03891 347 aa9.04□□□□□ -0.96
PTCH1-222ENST00000551425 KRT8P05787 483 aa9.04□□□□□ -0.96
PTCH1-222ENST00000551425 MED14OSP0DP75 135 aa9.04□□□□□ -0.96
PTCH1-222ENST00000551425 OSMP13725 252 aa9.04□□□□□ -0.96
PTCH1-222ENST00000551425 DAPP51397 102 aa9.04□□□□□ -0.96
PTCH1-222ENST00000551425 ACTBP60709 375 aa9.04□□□□□ -0.96
PTCH1-222ENST00000551425 NDPQ00604 133 aa9.04□□□□□ -0.96
PTCH1-222ENST00000551425 C5orf64Q2M2E5 130 aa9.04□□□□□ -0.96
PTCH1-222ENST00000551425 LIN54Q6MZP7 749 aa9.04□□□□□ -0.96
PTCH1-222ENST00000551425 OR9G4Q8NGQ1 327 aa9.04□□□□□ -0.96
PTCH1-222ENST00000551425 CIB1Q99828 191 aa9.04□□□□□ -0.96
PTCH1-222ENST00000551425 TEX12Q9BXU0 123 aa9.04□□□□□ -0.96
PTCH1-222ENST00000551425 ADGRL4Q9HBW9 690 aa9.04□□□□□ -0.96
PTCH1-222ENST00000551425 RANGRFQ9HD47 186 aaPredicted RBP9.04□□□□□ -0.96
PTCH1-222ENST00000551425 C8orf4Q9NR00 106 aa9.04□□□□□ -0.96
PTCH1-222ENST00000551425 CLN6Q9NWW5 311 aa9.04□□□□□ -0.96
PTCH1-222ENST00000551425 ENOPH1Q9UHY7 261 aa9.04□□□□□ -0.96
PTCH1-222ENST00000551425 KLK5Q9Y337 293 aaPredicted RBP9.04□□□□□ -0.96
PTCH1-222ENST00000551425 FBXO7Q9Y3I1 522 aa9.04□□□□□ -0.96
PTCH1-222ENST00000551425 ORC6Q9Y5N6 252 aa9.04□□□□□ -0.96
PTCH1-222ENST00000551425 IZUMO1RA6ND01 250 aa9.03□□□□□ -0.96
PTCH1-222ENST00000551425 NBR2O15453 112 aa9.03□□□□□ -0.96
PTCH1-222ENST00000551425 LANCL1O43813 399 aa9.03□□□□□ -0.96
PTCH1-222ENST00000551425 TPPPO94811 219 aa9.03□□□□□ -0.96
PTCH1-222ENST00000551425 UBCP0CG48 685 aaKnown RBP9.03□□□□□ -0.96
PTCH1-222ENST00000551425 DBTP11182 482 aaKnown RBP9.03□□□□□ -0.96
PTCH1-222ENST00000551425 ALDH3A2P51648 485 aa9.03□□□□□ -0.96
PTCH1-222ENST00000551425 CD81P60033 236 aa9.03□□□□□ -0.96
PTCH1-222ENST00000551425 TMEM236Q5W0B7 351 aa9.03□□□□□ -0.96
PTCH1-222ENST00000551425 ZNF660Q6AZW8 331 aaPredicted RBP9.03□□□□□ -0.96
PTCH1-222ENST00000551425 KDM4DQ6B0I6 523 aa9.03□□□□□ -0.96
PTCH1-222ENST00000551425 ELP2Q6IA86 826 aa9.03□□□□□ -0.96
PTCH1-222ENST00000551425 CD200R1LQ6Q8B3 271 aa9.03□□□□□ -0.96
PTCH1-222ENST00000551425 PRSS35Q8N3Z0 413 aa9.03□□□□□ -0.96
PTCH1-222ENST00000551425 ZNF439Q8NDP4 499 aa9.03□□□□□ -0.96
PTCH1-222ENST00000551425 RGP1Q92546 391 aaPredicted RBP9.03□□□□□ -0.96
PTCH1-222ENST00000551425 RITA1Q96K30 269 aa9.03□□□□□ -0.96
PTCH1-222ENST00000551425 ZNF251Q9BRH9 671 aa9.03□□□□□ -0.96
PTCH1-222ENST00000551425 SLA2Q9H6Q3 261 aa9.03□□□□□ -0.96
PTCH1-222ENST00000551425 NEK6Q9HC98 313 aa9.03□□□□□ -0.96
PTCH1-222ENST00000551425 ETAA1Q9NY74 926 aa9.03□□□□□ -0.96
PTCH1-222ENST00000551425 NUBP2Q9Y5Y2 271 aa9.03□□□□□ -0.96
PTCH1-222ENST00000551425 EI24O14681 340 aa9.02□□□□□ -0.97
PTCH1-222ENST00000551425 CASQ2O14958 399 aaPredicted RBP9.02□□□□□ -0.97
PTCH1-222ENST00000551425 SLC31A2O15432 143 aa9.02□□□□□ -0.97
PTCH1-222ENST00000551425 NDUFA3O95167 84 aa9.02□□□□□ -0.97
PTCH1-222ENST00000551425 ATP6V1G2O95670 118 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms