RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 NPIPA8P0DM63 369 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 C8orf89P0DMQ9 161 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 CCL1P22362 96 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 NPPCP23582 126 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 PEBP1P30086 187 aaKnown RBP4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 SRD5A2P31213 254 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 OR1D2P34982 312 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 MDH2P40926 338 aaKnown RBP4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 GPR6P46095 362 aaPredicted RBP4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 REG1BP48304 166 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 DNASE1L1P49184 302 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 DYNLT3P51808 116 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 SNU13P55769 128 aaKnown RBP4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 OR1D5P58170 312 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 CTXN1P60606 82 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 POLR2LP62875 67 aaKnown RBP4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 SERF2P84101 59 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 PRDX1Q06830 199 aaKnown RBP4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 PDGFRLQ15198 375 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 ITPRIPL2Q3MIP1 535 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 BVES-AS1Q5T3Y7 98 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 FNDC7Q5VTL7 733 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 LCN10Q6JVE6 187 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 PRR27Q6MZM9 219 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 C22orf39Q6P5X5 142 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 KCNIP4Q6PIL6 250 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 DNM1P34Q6PK57 102 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 Q6ZSR3 168 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 VASH2Q86V25 355 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 TMEM123Q8N131 208 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 LRRC25Q8N386 305 aaPredicted RBP4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 METTL27Q8N6F8 245 aaPredicted RBP4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 TCTEX1D1Q8N7M0 179 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 ZNF709Q8N972 641 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 OR5AU1Q8NGC0 362 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 OR52L2PQ8NGH6 319 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 OR5AR1Q8NGP9 310 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 OR1K1Q8NGR3 316 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 OR52N5Q8NH56 324 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 NT5CQ8TCD5 201 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 FAM222BQ8WU58 562 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 SARAFQ96BY9 339 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 C10orf35Q96D05 121 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 AJUBAQ96IF1 538 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 ARHGAP5-AS1Q96IT6 56 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 ZNF479Q96JC4 524 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 SMIM7Q9BQ49 75 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 KLHDC3Q9BQ90 382 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 LRFN3Q9BTN0 628 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 RSG1Q9BU20 258 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 STRADBQ9C0K7 418 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 VN1R1Q9GZP7 353 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 PARLQ9H300 379 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 ZDHHC6Q9H6R6 413 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 MMP25Q9NPA2 562 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 TMEM38BQ9NVV0 291 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 GNG13Q9P2W3 67 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 TAC3Q9UHF0 121 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 MMP17Q9ULZ9 603 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 RNF24Q9Y225 148 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 TBL2Q9Y4P3 447 aaKnown RBP4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 TIMM9Q9Y5J7 89 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 ZNF780BQ9Y6R6 833 aa4.51□□□□□ -1.69
LSM3P2-201ENST00000551246 ARID1BQ8NFD5 2236 aaPredicted RBP4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 TRAV9-2A0A087WT02 112 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 TRBV9A0A0B4J1U6 114 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 GAGE12BA1L429 117 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 NKX2-6A6NCS4 301 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 SYNDIG1LA6NDD5 238 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 AQP7P3A6NL99 342 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 GJE1A6NN92 205 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 B4DGG1 531 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 ADM5C9JUS6 153 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 C17orf112F2Z3M2 114 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 SAP30O75446 220 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 TRAPPC6AO75865 159 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 TOX4O94842 621 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 MPZL1O95297 269 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 RENP00797 406 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 IFNA1P01562 189 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 IGKV1D-16P01601 117 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 HLA-HP01893 362 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 HLA-DRB1P01911 266 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 STAG3L3P0CL85 134 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 CPMP14384 443 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 CST5P28325 142 aaPredicted RBP4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 ZNF93P35789 620 aaPredicted RBP4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 HINT1P49773 126 aaPredicted RBP4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 RIPPLY3P57055 190 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 LCN6P62502 163 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 CSNK2A1P68400 391 aaPredicted RBP4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 PSG9Q00887 426 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 MEF2BQ02080 365 aaPredicted RBP4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 EGR4Q05215 589 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 FMODQ06828 376 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 NOGQ13253 232 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 SCGB2A2Q13296 93 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 TSTA3Q13630 321 aaPredicted RBP4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 VAMP3Q15836 100 aa4.5□□□□□ -1.69
LSM3P2-201ENST00000551246 ADIRFQ15847 76 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms