RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 TMEM106AQ96A25 262 aa10.06□□□□□ -0.8
PTCH1-221ENST00000550914 S100A13Q99584 98 aa10.06□□□□□ -0.8
PTCH1-221ENST00000550914 SPACA1Q9HBV2 294 aa10.06□□□□□ -0.8
PTCH1-221ENST00000550914 ZNF581Q9P0T4 197 aa10.06□□□□□ -0.8
PTCH1-221ENST00000550914 SCOCQ9UIL1 159 aa10.06□□□□□ -0.8
PTCH1-221ENST00000550914 RPL36Q9Y3U8 105 aaKnown RBP10.06□□□□□ -0.8
PTCH1-221ENST00000550914 SEC14L6B5MCN3 397 aa10.05□□□□□ -0.8
PTCH1-221ENST00000550914 MT-ND4P03905 459 aa10.05□□□□□ -0.8
PTCH1-221ENST00000550914 VDAC1P21796 283 aa10.05□□□□□ -0.8
PTCH1-221ENST00000550914 PSMB8P28062 276 aa10.05□□□□□ -0.8
PTCH1-221ENST00000550914 CHATP28329 748 aa10.05□□□□□ -0.8
PTCH1-221ENST00000550914 SOX6P35712 828 aa10.05□□□□□ -0.8
PTCH1-221ENST00000550914 SOX2P48431 317 aa10.05□□□□□ -0.8
PTCH1-221ENST00000550914 INSL3P51460 131 aa10.05□□□□□ -0.8
PTCH1-221ENST00000550914 PPP3R1P63098 170 aa10.05□□□□□ -0.8
PTCH1-221ENST00000550914 STEAP3Q658P3 488 aa10.05□□□□□ -0.8
PTCH1-221ENST00000550914 ZFP1Q6P2D0 407 aa10.05□□□□□ -0.8
PTCH1-221ENST00000550914 STX19Q8N4C7 294 aa10.05□□□□□ -0.8
PTCH1-221ENST00000550914 OR52I1Q8NGK6 324 aa10.05□□□□□ -0.8
PTCH1-221ENST00000550914 PRR25Q96S07 402 aa10.05□□□□□ -0.8
PTCH1-221ENST00000550914 AMBNQ9NP70 447 aa10.05□□□□□ -0.8
PTCH1-221ENST00000550914 CHCHD3Q9NX63 227 aaKnown RBP10.05□□□□□ -0.8
PTCH1-221ENST00000550914 AASSQ9UDR5 926 aa10.05□□□□□ -0.8
PTCH1-221ENST00000550914 ING4Q9UNL4 249 aa10.05□□□□□ -0.8
PTCH1-221ENST00000550914 AIPO00170 330 aa10.04□□□□□ -0.8
PTCH1-221ENST00000550914 SPINT2O43291 252 aa10.04□□□□□ -0.8
PTCH1-221ENST00000550914 LIMS3P0CW19 117 aa10.04□□□□□ -0.8
PTCH1-221ENST00000550914 LIMS4P0CW20 117 aa10.04□□□□□ -0.8
PTCH1-221ENST00000550914 GTF2F2P13984 249 aa10.04□□□□□ -0.8
PTCH1-221ENST00000550914 BDKRB2P30411 391 aa10.04□□□□□ -0.8
PTCH1-221ENST00000550914 ECI1P42126 302 aa10.04□□□□□ -0.8
PTCH1-221ENST00000550914 GTF2A1P52655 376 aaPredicted RBP10.04□□□□□ -0.8
PTCH1-221ENST00000550914 RUNX1Q01196 453 aa10.04□□□□□ -0.8
PTCH1-221ENST00000550914 GPR176Q14439 515 aa10.04□□□□□ -0.8
PTCH1-221ENST00000550914 ATAD3CQ5T2N8 411 aa10.04□□□□□ -0.8
PTCH1-221ENST00000550914 DDI2Q5TDH0 399 aa10.04□□□□□ -0.8
PTCH1-221ENST00000550914 TRAT1Q6PIZ9 186 aa10.04□□□□□ -0.8
PTCH1-221ENST00000550914 CBR4Q8N4T8 237 aa10.04□□□□□ -0.8
PTCH1-221ENST00000550914 ZNF439Q8NDP4 499 aa10.04□□□□□ -0.8
PTCH1-221ENST00000550914 MRPS24Q96EL2 167 aaKnown RBP10.04□□□□□ -0.8
PTCH1-221ENST00000550914 UBE2E2Q96LR5 201 aa10.04□□□□□ -0.8
PTCH1-221ENST00000550914 HSPB9Q9BQS6 159 aa10.04□□□□□ -0.8
PTCH1-221ENST00000550914 RCC2Q9P258 522 aaKnown RBP10.04□□□□□ -0.8
PTCH1-221ENST00000550914 ZNF256Q9Y2P7 627 aaPredicted RBP10.04□□□□□ -0.8
PTCH1-221ENST00000550914 ZNF736B4DX44 427 aaPredicted RBP10.03□□□□□ -0.8
PTCH1-221ENST00000550914 C12orf77C9JDV5 145 aa10.03□□□□□ -0.8
PTCH1-221ENST00000550914 H3BNX3 289 aa10.03□□□□□ -0.8
PTCH1-221ENST00000550914 LANCL1O43813 399 aa10.03□□□□□ -0.8
PTCH1-221ENST00000550914 CA11O75493 328 aa10.03□□□□□ -0.8
PTCH1-221ENST00000550914 GPX5O75715 221 aa10.03□□□□□ -0.8
PTCH1-221ENST00000550914 OR8U8P0C7N1 319 aa10.03□□□□□ -0.8
PTCH1-221ENST00000550914 SERPINA2P20848 420 aa10.03□□□□□ -0.8
PTCH1-221ENST00000550914 VHLP40337 213 aa10.03□□□□□ -0.8
PTCH1-221ENST00000550914 F2RL1P55085 397 aa10.03□□□□□ -0.8
PTCH1-221ENST00000550914 C6orf183Q5T699 404 aa10.03□□□□□ -0.8
PTCH1-221ENST00000550914 GAPTQ8N292 157 aa10.03□□□□□ -0.8
PTCH1-221ENST00000550914 NEK7Q8TDX7 302 aa10.03□□□□□ -0.8
PTCH1-221ENST00000550914 CCDC107Q8WV48 283 aa10.03□□□□□ -0.8
PTCH1-221ENST00000550914 KCTD7Q96MP8 289 aa10.03□□□□□ -0.8
PTCH1-221ENST00000550914 FGF20Q9NP95 211 aaPredicted RBP10.03□□□□□ -0.8
PTCH1-221ENST00000550914 FAM53CQ9NYF3 392 aa10.03□□□□□ -0.8
PTCH1-221ENST00000550914 GNG12Q9UBI6 72 aa10.03□□□□□ -0.8
PTCH1-221ENST00000550914 TENM2Q9NT68 2774 aa10.02□□□□□ -0.81
PTCH1-221ENST00000550914 IGHV3-43A0A0B4J1X8 118 aa10.02□□□□□ -0.81
PTCH1-221ENST00000550914 MCRIP1C9JLW8 97 aa10.02□□□□□ -0.81
PTCH1-221ENST00000550914 DYNC1I1O14576 645 aa10.02□□□□□ -0.81
PTCH1-221ENST00000550914 SLC31A2O15432 143 aa10.02□□□□□ -0.81
PTCH1-221ENST00000550914 IGHV3-43DP0DP04 118 aa10.02□□□□□ -0.81
PTCH1-221ENST00000550914 IGFBP3P17936 291 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-221ENST00000550914 DCKP27707 260 aa10.02□□□□□ -0.81
PTCH1-221ENST00000550914 PPIFP30405 207 aaKnown RBP10.02□□□□□ -0.81
PTCH1-221ENST00000550914 ZNF134P52741 427 aa10.02□□□□□ -0.81
PTCH1-221ENST00000550914 LSAMPQ13449 338 aa10.02□□□□□ -0.81
PTCH1-221ENST00000550914 RIPK1Q13546 671 aa10.02□□□□□ -0.81
PTCH1-221ENST00000550914 ZNF260Q3ZCT1 412 aa10.02□□□□□ -0.81
PTCH1-221ENST00000550914 SLC22A6Q4U2R8 563 aa10.02□□□□□ -0.81
PTCH1-221ENST00000550914 CT45A1Q5HYN5 189 aa10.02□□□□□ -0.81
PTCH1-221ENST00000550914 SYT6Q5T7P8 510 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-221ENST00000550914 XAF1Q6GPH4 301 aa10.02□□□□□ -0.81
PTCH1-221ENST00000550914 FAM53AQ6NSI3 398 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-221ENST00000550914 TMPRSS11AQ6ZMR5 421 aa10.02□□□□□ -0.81
PTCH1-221ENST00000550914 OR11H1Q8NG94 326 aa10.02□□□□□ -0.81
PTCH1-221ENST00000550914 CT45A3Q8NHU0 189 aa10.02□□□□□ -0.81
PTCH1-221ENST00000550914 UBALD1Q8TB05 177 aa10.02□□□□□ -0.81
PTCH1-221ENST00000550914 SMIM19Q96E16 107 aa10.02□□□□□ -0.81
PTCH1-221ENST00000550914 ZNF184Q99676 751 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-221ENST00000550914 C9orf16Q9BUW7 83 aa10.02□□□□□ -0.81
PTCH1-221ENST00000550914 ZNF107Q9UII5 783 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-221ENST00000550914 TRAPPC2LQ9UL33 140 aa10.02□□□□□ -0.81
PTCH1-221ENST00000550914 VSIG4Q9Y279 399 aa10.02□□□□□ -0.81
PTCH1-221ENST00000550914 LOC100130705A0A1B0GUX0 176 aa10.01□□□□□ -0.81
PTCH1-221ENST00000550914 FAM90A10PA6NDY2 464 aa10.01□□□□□ -0.81
PTCH1-221ENST00000550914 FAM90A7PA6NKC0 464 aa10.01□□□□□ -0.81
PTCH1-221ENST00000550914 FAM90A23PA8MXZ1 464 aa10.01□□□□□ -0.81
PTCH1-221ENST00000550914 I3L521 148 aa10.01□□□□□ -0.81
PTCH1-221ENST00000550914 OGG1O15527 345 aa10.01□□□□□ -0.81
PTCH1-221ENST00000550914 SC5DO75845 299 aa10.01□□□□□ -0.81
PTCH1-221ENST00000550914 HBZP02008 142 aa10.01□□□□□ -0.81
PTCH1-221ENST00000550914 GLAP06280 429 aa10.01□□□□□ -0.81
PTCH1-221ENST00000550914 ZNF616Q08AN1 781 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms