RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 ZNF154Q13106 437 aa12.01□□□□□ -0.49
CALCOCO1-218ENST00000550804 TBC1D28Q2M2D7 210 aa12.01□□□□□ -0.49
CALCOCO1-218ENST00000550804 TMEM182Q6ZP80 229 aaPredicted RBP12.01□□□□□ -0.49
CALCOCO1-218ENST00000550804 Q6ZRM9 215 aa12.01□□□□□ -0.49
CALCOCO1-218ENST00000550804 CMTM1Q8IZ96 169 aa12.01□□□□□ -0.49
CALCOCO1-218ENST00000550804 SCRT1Q9BWW7 348 aa12.01□□□□□ -0.49
CALCOCO1-218ENST00000550804 PLK3Q9H4B4 646 aa12.01□□□□□ -0.49
CALCOCO1-218ENST00000550804 ESRP2Q9H6T0 727 aaKnown RBP12.01□□□□□ -0.49
CALCOCO1-218ENST00000550804 FZR1Q9UM11 496 aa12.01□□□□□ -0.49
CALCOCO1-218ENST00000550804 ATMQ13315 3056 aa12.01□□□□□ -0.49
CALCOCO1-218ENST00000550804 BORCS7-ASMTA0A0B4J1R7 106 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 PRSS44E7EML9 344 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 UCP1P25874 307 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 MPV17P39210 176 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 CAMLGP49069 296 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 RND3P61587 244 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 ZNF826PQ6ZT77 177 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 TMEM252Q8N6L7 170 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 GMPPAQ96IJ6 420 aaPredicted RBP12□□□□□ -0.49
CALCOCO1-218ENST00000550804 TAAR3PQ9P1P4 343 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 TINAGQ9UJW2 476 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 PPP1R3CQ9UQK1 317 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 GTF3C1Q12789 2109 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 KIAA2026Q5HYC2 2103 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 H3BP45 60 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 SNAPINO95295 136 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 VDAC1P21796 283 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 F2RP25116 425 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 SNCAP37840 140 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 DVL1P1P54792 670 aaPredicted RBP12□□□□□ -0.49
CALCOCO1-218ENST00000550804 UCP2P55851 309 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 UBE2NP61088 152 aaKnown RBP12□□□□□ -0.49
CALCOCO1-218ENST00000550804 CCL20P78556 96 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 ID3Q02535 119 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 FOXF2Q12947 444 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 TESK1Q15569 626 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 VWA1Q6PCB0 445 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 OR1J1Q8NGS3 322 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 NANOS1Q8WY41 292 aaKnown RBP12□□□□□ -0.49
CALCOCO1-218ENST00000550804 OPA3Q9H6K4 179 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 SPACA1Q9HBV2 294 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 CACNA1GO43497 2377 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 CACNA1DQ01668 2161 aa12□□□□□ -0.49
CALCOCO1-218ENST00000550804 J3QT63 122 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 WNT9BO14905 357 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 GPR37O15354 613 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 CEACAM4O75871 244 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 CTXN2P0C2S0 81 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 PPP1CCP36873 323 aaKnown RBP11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 HFEQ30201 348 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 DHRS7BQ6IAN0 325 aaPredicted RBP11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 ZNF880Q6PDB4 577 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 H1FOOQ8IZA3 346 aaPredicted RBP11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 SPAG16Q8N0X2 631 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 OR5C1Q8NGR4 320 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 EIF5A2Q9GZV4 153 aaKnown RBP11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 OR14J1Q9UGF5 321 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 TRAPPC2LQ9UL33 140 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 TNRC6AQ8NDV7 1962 aaKnown RBP11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 ATP6V0CP27449 155 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 PAX9P55771 341 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 ERVK11-1P61568 191 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 SRPXP78539 464 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 HLA-DRB3P79483 266 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 GABRA6Q16445 453 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 FAM214BQ7L5A3 538 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 FAM213BQ8TBF2 198 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 GPR146Q96CH1 333 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 PKIBQ9C010 78 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 RIMS4Q9H426 269 aaPredicted RBP11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 CDH20Q9HBT6 801 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 C19orf12Q9NSK7 152 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 ZFP57Q9NU63 452 aa11.99□□□□□ -0.49
CALCOCO1-218ENST00000550804 TRAV17A0A0B4J275 112 aa11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 PSPNO60542 156 aa11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 NXPH2O95156 264 aa11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 IGKV1-39P01597 117 aa11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 IGKV1D-39P04432 117 aa11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 PVALBP20472 110 aaPredicted RBP11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 DYNLT3P51808 116 aa11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 RUNX1Q01196 453 aa11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 GUK1Q16774 197 aa11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 KLF14Q8TD94 323 aaPredicted RBP11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 GTF3AQ92664 365 aaKnown RBP11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 RARRES2Q99969 163 aa11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 C20orf24Q9BUV8 137 aa11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 RTL8AQ9BWD3 113 aa11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 PLEKHF2Q9H8W4 249 aa11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 LYRM2Q9NU23 88 aaPredicted RBP11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 CLCF1Q9UBD9 225 aa11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 FBXO7Q9Y3I1 522 aa11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 ZNF175Q9Y473 711 aa11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 RNF115Q9Y4L5 304 aa11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 DMXL2Q8TDJ6 3036 aa11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 ARHGAP21Q5T5U3 1957 aa11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 HSPA12AO43301 675 aa11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 IGHG3P01860 377 aa11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 H2AFB1P0C5Y9 115 aa11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 ZNF16P17020 682 aaPredicted RBP11.98□□□□□ -0.49
CALCOCO1-218ENST00000550804 KIR2DL2P43627 348 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms