RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 OR11H1Q8NG94 326 aa12.01□□□□□ -0.49
RAB5C-205ENST00000550013 NEK7Q8TDX7 302 aa12.01□□□□□ -0.49
RAB5C-205ENST00000550013 MYCBPQ99417 103 aaPredicted RBP12.01□□□□□ -0.49
RAB5C-205ENST00000550013 GNB4Q9HAV0 340 aa12.01□□□□□ -0.49
RAB5C-205ENST00000550013 SIRT4Q9Y6E7 314 aaPredicted RBP12.01□□□□□ -0.49
RAB5C-205ENST00000550013 C12orf77C9JDV5 145 aa12□□□□□ -0.49
RAB5C-205ENST00000550013 ORC5O43913 435 aa12□□□□□ -0.49
RAB5C-205ENST00000550013 CSTBP04080 98 aaKnown RBP12□□□□□ -0.49
RAB5C-205ENST00000550013 IGF1P05019 195 aa12□□□□□ -0.49
RAB5C-205ENST00000550013 SLC2A2P11168 524 aaPredicted RBP12□□□□□ -0.49
RAB5C-205ENST00000550013 CHATP28329 748 aa12□□□□□ -0.49
RAB5C-205ENST00000550013 VHLP40337 213 aa12□□□□□ -0.49
RAB5C-205ENST00000550013 ALDH3A2P51648 485 aa12□□□□□ -0.49
RAB5C-205ENST00000550013 ZNF134P52741 427 aa12□□□□□ -0.49
RAB5C-205ENST00000550013 MRPL28Q13084 256 aaKnown RBP12□□□□□ -0.49
RAB5C-205ENST00000550013 DDI2Q5TDH0 399 aa12□□□□□ -0.49
RAB5C-205ENST00000550013 ASPHD1Q5U4P2 390 aa12□□□□□ -0.49
RAB5C-205ENST00000550013 SLC25A48Q6ZT89 311 aaKnown RBP12□□□□□ -0.49
RAB5C-205ENST00000550013 OR8H1Q8NGG4 311 aa12□□□□□ -0.49
RAB5C-205ENST00000550013 OR10V1Q8NGI7 309 aa12□□□□□ -0.49
RAB5C-205ENST00000550013 OR52I1Q8NGK6 324 aa12□□□□□ -0.49
RAB5C-205ENST00000550013 MYOZ3Q8TDC0 251 aa12□□□□□ -0.49
RAB5C-205ENST00000550013 GPR148Q8TDV2 347 aa12□□□□□ -0.49
RAB5C-205ENST00000550013 ORAI1Q96D31 301 aa12□□□□□ -0.49
RAB5C-205ENST00000550013 KLK15Q9H2R5 256 aa12□□□□□ -0.49
RAB5C-205ENST00000550013 ZNF107Q9UII5 783 aaPredicted RBP12□□□□□ -0.49
RAB5C-205ENST00000550013 GMPPBQ9Y5P6 360 aa12□□□□□ -0.49
RAB5C-205ENST00000550013 AIPO00170 330 aa11.99□□□□□ -0.49
RAB5C-205ENST00000550013 MYF6P23409 242 aa11.99□□□□□ -0.49
RAB5C-205ENST00000550013 ZNF93P35789 620 aaPredicted RBP11.99□□□□□ -0.49
RAB5C-205ENST00000550013 ZNF137PP52743 207 aa11.99□□□□□ -0.49
RAB5C-205ENST00000550013 KIAA0141Q14154 515 aaPredicted RBP11.99□□□□□ -0.49
RAB5C-205ENST00000550013 MPV17LQ2QL34 196 aa11.99□□□□□ -0.49
RAB5C-205ENST00000550013 KLHL22Q53GT1 634 aa11.99□□□□□ -0.49
RAB5C-205ENST00000550013 CT45A1Q5HYN5 189 aa11.99□□□□□ -0.49
RAB5C-205ENST00000550013 LINC00596Q86U02 117 aa11.99□□□□□ -0.49
RAB5C-205ENST00000550013 CT45A3Q8NHU0 189 aa11.99□□□□□ -0.49
RAB5C-205ENST00000550013 RHOXF1Q8NHV9 184 aa11.99□□□□□ -0.49
RAB5C-205ENST00000550013 TMEM106AQ96A25 262 aa11.99□□□□□ -0.49
RAB5C-205ENST00000550013 OR5B12Q96R08 314 aa11.99□□□□□ -0.49
RAB5C-205ENST00000550013 TMEM138Q9NPI0 162 aa11.99□□□□□ -0.49
RAB5C-205ENST00000550013 WSB1Q9Y6I7 421 aa11.99□□□□□ -0.49
RAB5C-205ENST00000550013 G3V318 75 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 I3L521 148 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 TXNL1O43396 289 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 CIB2O75838 187 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 CD2P06729 351 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 LIMS3P0CW19 117 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 LIMS4P0CW20 117 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 RASSF2P50749 326 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 GNB1P62873 340 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 PPP3R1P63098 170 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 RAB40BQ12829 278 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 LSAMPQ13449 338 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 Q3ZCU0 254 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 SLC22A6Q4U2R8 563 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 CASC10Q5T4H9 136 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 SBSPONQ8IVN8 264 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 PRR18Q8N4B5 295 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 CBR4Q8N4T8 237 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 OR1N2Q8NGR9 330 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 OR1L1Q8NH94 360 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 MUC7Q8TAX7 377 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 CYYR1Q96J86 154 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 S100A13Q99584 98 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 GNG12Q9UBI6 72 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 ZNF580Q9UK33 172 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 SMAD5-AS1Q9Y6J3 95 aa11.98□□□□□ -0.49
RAB5C-205ENST00000550013 MAGEA13PA6NCF6 341 aa11.97□□□□□ -0.49
RAB5C-205ENST00000550013 H3BNX3 289 aa11.97□□□□□ -0.49
RAB5C-205ENST00000550013 HBZP02008 142 aa11.97□□□□□ -0.49
RAB5C-205ENST00000550013 OR8U8P0C7N1 319 aa11.97□□□□□ -0.49
RAB5C-205ENST00000550013 OR5H8P0DN80 308 aa11.97□□□□□ -0.49
RAB5C-205ENST00000550013 PPIFP30405 207 aaKnown RBP11.97□□□□□ -0.49
RAB5C-205ENST00000550013 BDKRB2P30411 391 aa11.97□□□□□ -0.49
RAB5C-205ENST00000550013 ZNF616Q08AN1 781 aa11.97□□□□□ -0.49
RAB5C-205ENST00000550013 MMDQ15546 238 aa11.97□□□□□ -0.49
RAB5C-205ENST00000550013 SYT6Q5T7P8 510 aaPredicted RBP11.97□□□□□ -0.49
RAB5C-205ENST00000550013 RPL22L1Q6P5R6 122 aaKnown RBP11.97□□□□□ -0.49
RAB5C-205ENST00000550013 STX19Q8N4C7 294 aa11.97□□□□□ -0.49
RAB5C-205ENST00000550013 ZNF491Q8N8L2 437 aa11.97□□□□□ -0.49
RAB5C-205ENST00000550013 OR13C5Q8NGS8 318 aa11.97□□□□□ -0.49
RAB5C-205ENST00000550013 OR4K15Q8NH41 348 aa11.97□□□□□ -0.49
RAB5C-205ENST00000550013 UBE2E2Q96LR5 201 aa11.97□□□□□ -0.49
RAB5C-205ENST00000550013 Q96MT0 163 aa11.97□□□□□ -0.49
RAB5C-205ENST00000550013 RCHY1Q96PM5 261 aa11.97□□□□□ -0.49
RAB5C-205ENST00000550013 MRPS18AQ9NVS2 196 aaKnown RBP11.97□□□□□ -0.49
RAB5C-205ENST00000550013 PAK1IP1Q9NWT1 392 aaPredicted RBP11.97□□□□□ -0.49
RAB5C-205ENST00000550013 RCC2Q9P258 522 aaKnown RBP11.97□□□□□ -0.49
RAB5C-205ENST00000550013 TRAPPC2LQ9UL33 140 aa11.97□□□□□ -0.49
RAB5C-205ENST00000550013 VSIG4Q9Y279 399 aa11.97□□□□□ -0.49
RAB5C-205ENST00000550013 ATP6V0E1O15342 81 aa11.96□□□□□ -0.49
RAB5C-205ENST00000550013 SPINT2O43291 252 aa11.96□□□□□ -0.49
RAB5C-205ENST00000550013 GTF2F2P13984 249 aa11.96□□□□□ -0.49
RAB5C-205ENST00000550013 CNTFRP26992 372 aa11.96□□□□□ -0.49
RAB5C-205ENST00000550013 INSL3P51460 131 aa11.96□□□□□ -0.49
RAB5C-205ENST00000550013 ADARB1P78563 741 aaKnown RBP11.96□□□□□ -0.49
RAB5C-205ENST00000550013 RUNX1Q01196 453 aa11.96□□□□□ -0.49
RAB5C-205ENST00000550013 TMEM65Q6PI78 240 aa11.96□□□□□ -0.49
RAB5C-205ENST00000550013 OVCH2Q7RTZ1 564 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms