RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 RAB40BQ12829 278 aa10.61□□□□□ -0.71
TROAP-211ENST00000549891 ATAD3CQ5T2N8 411 aa10.61□□□□□ -0.71
TROAP-211ENST00000549891 TMEM65Q6PI78 240 aa10.61□□□□□ -0.71
TROAP-211ENST00000549891 SLC25A48Q6ZT89 311 aaKnown RBP10.61□□□□□ -0.71
TROAP-211ENST00000549891 OR11H1Q8NG94 326 aa10.61□□□□□ -0.71
TROAP-211ENST00000549891 UBE2E2Q96LR5 201 aa10.61□□□□□ -0.71
TROAP-211ENST00000549891 KCTD7Q96MP8 289 aa10.61□□□□□ -0.71
TROAP-211ENST00000549891 ASCL2Q99929 193 aa10.61□□□□□ -0.71
TROAP-211ENST00000549891 HSPB9Q9BQS6 159 aa10.61□□□□□ -0.71
TROAP-211ENST00000549891 SPACA1Q9HBV2 294 aa10.61□□□□□ -0.71
TROAP-211ENST00000549891 GMPPBQ9Y5P6 360 aa10.61□□□□□ -0.71
TROAP-211ENST00000549891 STAB2Q8WWQ8 2551 aa10.61□□□□□ -0.71
TROAP-211ENST00000549891 IGHV3-43A0A0B4J1X8 118 aa10.6□□□□□ -0.71
TROAP-211ENST00000549891 E9PI62 339 aa10.6□□□□□ -0.71
TROAP-211ENST00000549891 EI24O14681 340 aa10.6□□□□□ -0.71
TROAP-211ENST00000549891 GEMIN2O14893 280 aaKnown RBP10.6□□□□□ -0.71
TROAP-211ENST00000549891 LY86O95711 162 aa10.6□□□□□ -0.71
TROAP-211ENST00000549891 IGHV3-43DP0DP04 118 aa10.6□□□□□ -0.71
TROAP-211ENST00000549891 GTF2F2P13984 249 aa10.6□□□□□ -0.71
TROAP-211ENST00000549891 SERPINA2P20848 420 aa10.6□□□□□ -0.71
TROAP-211ENST00000549891 ALDH3A2P51648 485 aa10.6□□□□□ -0.71
TROAP-211ENST00000549891 ZNF137PP52743 207 aa10.6□□□□□ -0.71
TROAP-211ENST00000549891 GPR176Q14439 515 aa10.6□□□□□ -0.71
TROAP-211ENST00000549891 ZIK1Q3SY52 487 aaPredicted RBP10.6□□□□□ -0.71
TROAP-211ENST00000549891 CCDC58Q4VC31 144 aa10.6□□□□□ -0.71
TROAP-211ENST00000549891 FAM27D1Q5T7N8 215 aa10.6□□□□□ -0.71
TROAP-211ENST00000549891 DDI2Q5TDH0 399 aa10.6□□□□□ -0.71
TROAP-211ENST00000549891 ZNF497Q6ZNH5 498 aa10.6□□□□□ -0.71
TROAP-211ENST00000549891 CCDC107Q8WV48 283 aa10.6□□□□□ -0.71
TROAP-211ENST00000549891 TMEM106AQ96A25 262 aa10.6□□□□□ -0.71
TROAP-211ENST00000549891 GNG12Q9UBI6 72 aa10.6□□□□□ -0.71
TROAP-211ENST00000549891 ZNF107Q9UII5 783 aaPredicted RBP10.6□□□□□ -0.71
TROAP-211ENST00000549891 MT-ND4P03905 459 aa10.59□□□□□ -0.71
TROAP-211ENST00000549891 BDKRB2P30411 391 aa10.59□□□□□ -0.71
TROAP-211ENST00000549891 F2RL1P55085 397 aa10.59□□□□□ -0.71
TROAP-211ENST00000549891 ZNF616Q08AN1 781 aa10.59□□□□□ -0.71
TROAP-211ENST00000549891 C6orf183Q5T699 404 aa10.59□□□□□ -0.71
TROAP-211ENST00000549891 STEAP3Q658P3 488 aa10.59□□□□□ -0.71
TROAP-211ENST00000549891 RPL22L1Q6P5R6 122 aaKnown RBP10.59□□□□□ -0.71
TROAP-211ENST00000549891 TRAT1Q6PIZ9 186 aa10.59□□□□□ -0.71
TROAP-211ENST00000549891 ZNF429Q86V71 674 aa10.59□□□□□ -0.71
TROAP-211ENST00000549891 OR1N2Q8NGR9 330 aa10.59□□□□□ -0.71
TROAP-211ENST00000549891 MUC7Q8TAX7 377 aa10.59□□□□□ -0.71
TROAP-211ENST00000549891 UBALD1Q8TB05 177 aa10.59□□□□□ -0.71
TROAP-211ENST00000549891 ZNF581Q9P0T4 197 aa10.59□□□□□ -0.71
TROAP-211ENST00000549891 TRAPPC2LQ9UL33 140 aa10.59□□□□□ -0.71
TROAP-211ENST00000549891 VSIG4Q9Y279 399 aa10.59□□□□□ -0.71
TROAP-211ENST00000549891 RPL36Q9Y3U8 105 aaKnown RBP10.59□□□□□ -0.71
TROAP-211ENST00000549891 DNAH7Q8WXX0 4024 aa10.58□□□□□ -0.72
TROAP-211ENST00000549891 ZNF736B4DX44 427 aaPredicted RBP10.58□□□□□ -0.72
TROAP-211ENST00000549891 MCRIP1C9JLW8 97 aa10.58□□□□□ -0.72
TROAP-211ENST00000549891 GABRB1P18505 474 aa10.58□□□□□ -0.72
TROAP-211ENST00000549891 RUNX1Q01196 453 aa10.58□□□□□ -0.72
TROAP-211ENST00000549891 MMDQ15546 238 aa10.58□□□□□ -0.72
TROAP-211ENST00000549891 SLC22A6Q4U2R8 563 aa10.58□□□□□ -0.72
TROAP-211ENST00000549891 SYT6Q5T7P8 510 aaPredicted RBP10.58□□□□□ -0.72
TROAP-211ENST00000549891 RHOXF1Q8NHV9 184 aa10.58□□□□□ -0.72
TROAP-211ENST00000549891 MYOZ3Q8TDC0 251 aa10.58□□□□□ -0.72
TROAP-211ENST00000549891 RGP1Q92546 391 aaPredicted RBP10.58□□□□□ -0.72
TROAP-211ENST00000549891 AMBNQ9NP70 447 aa10.58□□□□□ -0.72
TROAP-211ENST00000549891 AASSQ9UDR5 926 aa10.58□□□□□ -0.72
TROAP-211ENST00000549891 C12orf77C9JDV5 145 aa10.57□□□□□ -0.72
TROAP-211ENST00000549891 I3L521 148 aa10.57□□□□□ -0.72
TROAP-211ENST00000549891 SLC31A2O15432 143 aa10.57□□□□□ -0.72
TROAP-211ENST00000549891 LANCL1O43813 399 aa10.57□□□□□ -0.72
TROAP-211ENST00000549891 CA11O75493 328 aa10.57□□□□□ -0.72
TROAP-211ENST00000549891 SLC2A2P11168 524 aaPredicted RBP10.57□□□□□ -0.72
TROAP-211ENST00000549891 MYF6P23409 242 aa10.57□□□□□ -0.72
TROAP-211ENST00000549891 PPIFP30405 207 aaKnown RBP10.57□□□□□ -0.72
TROAP-211ENST00000549891 GTF2A1P52655 376 aaPredicted RBP10.57□□□□□ -0.72
TROAP-211ENST00000549891 LSAMPQ13449 338 aa10.57□□□□□ -0.72
TROAP-211ENST00000549891 RIPK1Q13546 671 aa10.57□□□□□ -0.72
TROAP-211ENST00000549891 CT45A1Q5HYN5 189 aa10.57□□□□□ -0.72
TROAP-211ENST00000549891 CASC10Q5T4H9 136 aa10.57□□□□□ -0.72
TROAP-211ENST00000549891 PRR18Q8N4B5 295 aa10.57□□□□□ -0.72
TROAP-211ENST00000549891 ZNF491Q8N8L2 437 aa10.57□□□□□ -0.72
TROAP-211ENST00000549891 ZNF439Q8NDP4 499 aa10.57□□□□□ -0.72
TROAP-211ENST00000549891 OR52I1Q8NGK6 324 aa10.57□□□□□ -0.72
TROAP-211ENST00000549891 CT45A3Q8NHU0 189 aa10.57□□□□□ -0.72
TROAP-211ENST00000549891 PYDC1Q8WXC3 89 aa10.57□□□□□ -0.72
TROAP-211ENST00000549891 MRPS24Q96EL2 167 aaKnown RBP10.57□□□□□ -0.72
TROAP-211ENST00000549891 RCHY1Q96PM5 261 aa10.57□□□□□ -0.72
TROAP-211ENST00000549891 MRPS18AQ9NVS2 196 aaKnown RBP10.57□□□□□ -0.72
TROAP-211ENST00000549891 ETAA1Q9NY74 926 aa10.57□□□□□ -0.72
TROAP-211ENST00000549891 CKLFQ9UBR5 152 aa10.57□□□□□ -0.72
TROAP-211ENST00000549891 OVOL1O14753 267 aa10.56□□□□□ -0.72
TROAP-211ENST00000549891 HBZP02008 142 aa10.56□□□□□ -0.72
TROAP-211ENST00000549891 ZNF134P52741 427 aa10.56□□□□□ -0.72
TROAP-211ENST00000549891 FAM53AQ6NSI3 398 aaPredicted RBP10.56□□□□□ -0.72
TROAP-211ENST00000549891 TMPRSS11AQ6ZMR5 421 aa10.56□□□□□ -0.72
TROAP-211ENST00000549891 CBR4Q8N4T8 237 aa10.56□□□□□ -0.72
TROAP-211ENST00000549891 OR10V1Q8NGI7 309 aa10.56□□□□□ -0.72
TROAP-211ENST00000549891 ZNF184Q99676 751 aaPredicted RBP10.56□□□□□ -0.72
TROAP-211ENST00000549891 ZNF251Q9BRH9 671 aa10.56□□□□□ -0.72
TROAP-211ENST00000549891 OR51J1Q9H342 316 aa10.56□□□□□ -0.72
TROAP-211ENST00000549891 ZMAT4Q9H898 229 aa10.56□□□□□ -0.72
TROAP-211ENST00000549891 ISYNA1Q9NPH2 558 aa10.56□□□□□ -0.72
TROAP-211ENST00000549891 RCC2Q9P258 522 aaKnown RBP10.56□□□□□ -0.72
TROAP-211ENST00000549891 ERGIC3Q9Y282 383 aa10.56□□□□□ -0.72
TROAP-211ENST00000549891 TRAV41A0A0B4J266 112 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms