RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 LINC01548A6NM66 108 aa10.6□□□□□ -0.71
GCN1-206ENST00000549815 SLC31A2O15432 143 aa10.6□□□□□ -0.71
GCN1-206ENST00000549815 SC5DO75845 299 aa10.6□□□□□ -0.71
GCN1-206ENST00000549815 CAPGP40121 348 aa10.6□□□□□ -0.71
GCN1-206ENST00000549815 VHLP40337 213 aa10.6□□□□□ -0.71
GCN1-206ENST00000549815 ZNF134P52741 427 aa10.6□□□□□ -0.71
GCN1-206ENST00000549815 ZNF137PP52743 207 aa10.6□□□□□ -0.71
GCN1-206ENST00000549815 SLC35A2P78381 396 aa10.6□□□□□ -0.71
GCN1-206ENST00000549815 RCN1Q15293 331 aa10.6□□□□□ -0.71
GCN1-206ENST00000549815 OGFRL1Q5TC84 451 aaPredicted RBP10.6□□□□□ -0.71
GCN1-206ENST00000549815 SIGIRRQ6IA17 410 aa10.6□□□□□ -0.71
GCN1-206ENST00000549815 C18orf65Q6ZTR6 163 aa10.6□□□□□ -0.71
GCN1-206ENST00000549815 MOB3BQ86TA1 216 aa10.6□□□□□ -0.71
GCN1-206ENST00000549815 JAGN1Q8N5M9 183 aa10.6□□□□□ -0.71
GCN1-206ENST00000549815 Q8N9W7 124 aa10.6□□□□□ -0.71
GCN1-206ENST00000549815 CHPT1Q8WUD6 406 aa10.6□□□□□ -0.71
GCN1-206ENST00000549815 RTN4IP1Q8WWV3 396 aaPredicted RBP10.6□□□□□ -0.71
GCN1-206ENST00000549815 SPACA1Q9HBV2 294 aa10.6□□□□□ -0.71
GCN1-206ENST00000549815 LINC00527Q9UJ94 153 aa10.6□□□□□ -0.71
GCN1-206ENST00000549815 PNMA8CA0A1B0GUJ8 204 aa10.59□□□□□ -0.71
GCN1-206ENST00000549815 FAM90A10PA6NDY2 464 aa10.59□□□□□ -0.71
GCN1-206ENST00000549815 FAM90A7PA6NKC0 464 aa10.59□□□□□ -0.71
GCN1-206ENST00000549815 FAM90A23PA8MXZ1 464 aa10.59□□□□□ -0.71
GCN1-206ENST00000549815 MCRIP1C9JLW8 97 aa10.59□□□□□ -0.71
GCN1-206ENST00000549815 K7EIL1 84 aa10.59□□□□□ -0.71
GCN1-206ENST00000549815 CASQ2O14958 399 aaPredicted RBP10.59□□□□□ -0.71
GCN1-206ENST00000549815 MAS1P04201 325 aa10.59□□□□□ -0.71
GCN1-206ENST00000549815 CD1BP29016 333 aa10.59□□□□□ -0.71
GCN1-206ENST00000549815 GP2P55259 537 aaKnown RBP10.59□□□□□ -0.71
GCN1-206ENST00000549815 WNT4P56705 351 aa10.59□□□□□ -0.71
GCN1-206ENST00000549815 KRTAP10-11P60412 298 aa10.59□□□□□ -0.71
GCN1-206ENST00000549815 RPL23AP62750 156 aaKnown RBP10.59□□□□□ -0.71
GCN1-206ENST00000549815 KHDC1LQ5JSQ8 128 aa10.59□□□□□ -0.71
GCN1-206ENST00000549815 SYT6Q5T7P8 510 aaPredicted RBP10.59□□□□□ -0.71
GCN1-206ENST00000549815 RAB12Q6IQ22 244 aa10.59□□□□□ -0.71
GCN1-206ENST00000549815 SLC25A48Q6ZT89 311 aaKnown RBP10.59□□□□□ -0.71
GCN1-206ENST00000549815 OR2W3Q7Z3T1 314 aa10.59□□□□□ -0.71
GCN1-206ENST00000549815 SLC35E3Q7Z769 313 aa10.59□□□□□ -0.71
GCN1-206ENST00000549815 TGIF2LXQ8IUE1 241 aa10.59□□□□□ -0.71
GCN1-206ENST00000549815 MRPL41Q8IXM3 137 aaKnown RBP10.59□□□□□ -0.71
GCN1-206ENST00000549815 C8orf59Q8N0T1 100 aaPredicted RBP10.59□□□□□ -0.71
GCN1-206ENST00000549815 STPG2Q8N412 459 aa10.59□□□□□ -0.71
GCN1-206ENST00000549815 NANOGP1Q8N7R0 232 aa10.59□□□□□ -0.71
GCN1-206ENST00000549815 OR4K15Q8NH41 348 aa10.59□□□□□ -0.71
GCN1-206ENST00000549815 NEK7Q8TDX7 302 aa10.59□□□□□ -0.71
GCN1-206ENST00000549815 Q96M66 194 aa10.59□□□□□ -0.71
GCN1-206ENST00000549815 BANF2Q9H503 90 aa10.59□□□□□ -0.71
GCN1-206ENST00000549815 PLSCR3Q9NRY6 295 aa10.59□□□□□ -0.71
GCN1-206ENST00000549815 ETAA1Q9NY74 926 aa10.59□□□□□ -0.71
GCN1-206ENST00000549815 SERPINE3A8MV23 424 aa10.58□□□□□ -0.72
GCN1-206ENST00000549815 ZNF736B4DX44 427 aaPredicted RBP10.58□□□□□ -0.72
GCN1-206ENST00000549815 DUS4LO95620 317 aaKnown RBP10.58□□□□□ -0.72
GCN1-206ENST00000549815 GLAP06280 429 aa10.58□□□□□ -0.72
GCN1-206ENST00000549815 MGMTP16455 207 aa10.58□□□□□ -0.72
GCN1-206ENST00000549815 RCC1P18754 421 aaPredicted RBP10.58□□□□□ -0.72
GCN1-206ENST00000549815 CELP19835 753 aa10.58□□□□□ -0.72
GCN1-206ENST00000549815 GPR12P47775 334 aa10.58□□□□□ -0.72
GCN1-206ENST00000549815 THBS3P49746 956 aa10.58□□□□□ -0.72
GCN1-206ENST00000549815 EGFEM1PQ0D2K5 195 aa10.58□□□□□ -0.72
GCN1-206ENST00000549815 CT45A1Q5HYN5 189 aa10.58□□□□□ -0.72
GCN1-206ENST00000549815 AWAT2Q6E213 333 aa10.58□□□□□ -0.72
GCN1-206ENST00000549815 UNQ9370/PRO34162Q6UXP9 181 aa10.58□□□□□ -0.72
GCN1-206ENST00000549815 AHSA2Q719I0 299 aa10.58□□□□□ -0.72
GCN1-206ENST00000549815 STX19Q8N4C7 294 aa10.58□□□□□ -0.72
GCN1-206ENST00000549815 OR2T10Q8NGZ9 312 aa10.58□□□□□ -0.72
GCN1-206ENST00000549815 CT45A3Q8NHU0 189 aa10.58□□□□□ -0.72
GCN1-206ENST00000549815 RBMXL1Q96E39 390 aaKnown RBP10.58□□□□□ -0.72
GCN1-206ENST00000549815 ABCG5Q9H222 651 aa10.58□□□□□ -0.72
GCN1-206ENST00000549815 ZFP57Q9NU63 452 aa10.58□□□□□ -0.72
GCN1-206ENST00000549815 MBNL3Q9NUK0 354 aaKnown RBP10.58□□□□□ -0.72
GCN1-206ENST00000549815 LIN7CQ9NUP9 197 aaKnown RBP10.58□□□□□ -0.72
GCN1-206ENST00000549815 PEX16Q9Y5Y5 336 aa10.58□□□□□ -0.72
GCN1-206ENST00000549815 COL7A1Q02388 2944 aa10.57□□□□□ -0.72
GCN1-206ENST00000549815 MYL12BO14950 172 aa10.57□□□□□ -0.72
GCN1-206ENST00000549815 CA11O75493 328 aa10.57□□□□□ -0.72
GCN1-206ENST00000549815 HBZP02008 142 aa10.57□□□□□ -0.72
GCN1-206ENST00000549815 IL3RAP26951 378 aa10.57□□□□□ -0.72
GCN1-206ENST00000549815 INSL4Q14641 139 aa10.57□□□□□ -0.72
GCN1-206ENST00000549815 TMEM30BQ3MIR4 351 aa10.57□□□□□ -0.72
GCN1-206ENST00000549815 C6orf141Q5SZD1 244 aa10.57□□□□□ -0.72
GCN1-206ENST00000549815 C6orf183Q5T699 404 aa10.57□□□□□ -0.72
GCN1-206ENST00000549815 RNLSQ5VYX0 342 aa10.57□□□□□ -0.72
GCN1-206ENST00000549815 C8orf86Q6ZUL3 223 aa10.57□□□□□ -0.72
GCN1-206ENST00000549815 C5orf24Q7Z6I8 188 aa10.57□□□□□ -0.72
GCN1-206ENST00000549815 FOXRED2Q8IWF2 684 aa10.57□□□□□ -0.72
GCN1-206ENST00000549815 COMMD1Q8N668 190 aa10.57□□□□□ -0.72
GCN1-206ENST00000549815 NKAIN3Q8N8D7 197 aa10.57□□□□□ -0.72
GCN1-206ENST00000549815 BPIFB6Q8NFQ5 453 aa10.57□□□□□ -0.72
GCN1-206ENST00000549815 OR10V1Q8NGI7 309 aa10.57□□□□□ -0.72
GCN1-206ENST00000549815 OR1L1Q8NH94 360 aa10.57□□□□□ -0.72
GCN1-206ENST00000549815 TFAP2CQ92754 450 aa10.57□□□□□ -0.72
GCN1-206ENST00000549815 P2RX4Q99571 388 aa10.57□□□□□ -0.72
GCN1-206ENST00000549815 UQCC2Q9BRT2 126 aa10.57□□□□□ -0.72
GCN1-206ENST00000549815 SELENOIQ9C0D9 397 aa10.57□□□□□ -0.72
GCN1-206ENST00000549815 TRAPPC2LQ9UL33 140 aa10.57□□□□□ -0.72
GCN1-206ENST00000549815 NCBP2LA6PVI3 153 aaKnown RBP10.56□□□□□ -0.72
GCN1-206ENST00000549815 SPINT2O43291 252 aa10.56□□□□□ -0.72
GCN1-206ENST00000549815 TXNL1O43396 289 aa10.56□□□□□ -0.72
GCN1-206ENST00000549815 MPIG6BO95866 241 aa10.56□□□□□ -0.72
GCN1-206ENST00000549815 MOSP00540 346 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms