RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 COLCA1Q6ZS62 124 aa12.06□□□□□ -0.48
RAPGEF3-218ENST00000548919 MRPL21Q7Z2W9 205 aaKnown RBP12.06□□□□□ -0.48
RAPGEF3-218ENST00000548919 SLC35E3Q7Z769 313 aa12.06□□□□□ -0.48
RAPGEF3-218ENST00000548919 MRPL30Q8TCC3 161 aaKnown RBP12.06□□□□□ -0.48
RAPGEF3-218ENST00000548919 ABHD14BQ96IU4 210 aa12.06□□□□□ -0.48
RAPGEF3-218ENST00000548919 SGCZQ96LD1 299 aa12.06□□□□□ -0.48
RAPGEF3-218ENST00000548919 SSX3Q99909 188 aa12.06□□□□□ -0.48
RAPGEF3-218ENST00000548919 CFIP05156 583 aa12.06□□□□□ -0.48
RAPGEF3-218ENST00000548919 ARL16Q0P5N6 197 aa12.06□□□□□ -0.48
RAPGEF3-218ENST00000548919 ZNF726P1Q15940 193 aa12.06□□□□□ -0.48
RAPGEF3-218ENST00000548919 CEACAM21Q3KPI0 293 aa12.06□□□□□ -0.48
RAPGEF3-218ENST00000548919 KHDC3LQ587J8 217 aa12.06□□□□□ -0.48
RAPGEF3-218ENST00000548919 ZDHHC23Q8IYP9 409 aa12.06□□□□□ -0.48
RAPGEF3-218ENST00000548919 PRR18Q8N4B5 295 aa12.06□□□□□ -0.48
RAPGEF3-218ENST00000548919 NOSIPQ9Y314 301 aaKnown RBP12.06□□□□□ -0.48
RAPGEF3-218ENST00000548919 KIR2DS1A0A191URI9 304 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 FAM90A10PA6NDY2 464 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 FAM90A18PA6NE21 464 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 FAM90A16PA6NEW6 464 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 FAM90A20PA6NIJ5 464 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 FAM90A8PA6NJQ4 464 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 FAM90A7PA6NKC0 464 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 FAM90A22PA8MWA6 464 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 FAM90A12PA8MX19 464 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 FAM90A5PA8MXJ8 464 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 FAM90A23PA8MXZ1 464 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 MRPL33O75394 65 aaKnown RBP12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 IFNA5P01569 189 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 SERPINE2P07093 398 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 FAM90A15PP0C7V4 464 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 METTL15P1P0C7V9 234 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 FAM90A13PP0C7W8 464 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 FAM90A14PP0C7W9 464 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 FAM90A24PP0C7X0 464 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 KIR2DS4P43632 304 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 KIR2DS1Q14954 304 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 ABHD5Q8WTS1 349 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 FRZBQ92765 325 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 OR1A1Q9P1Q5 309 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 ARHGAP21Q5T5U3 1957 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 DOCK10Q96BY6 2186 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 DUXBA0A1W2PPF3 345 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 KIAA1324LA8MWY0 1029 aaPredicted RBP12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 CYTIPO60759 359 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 HBE1P02100 147 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 TRGC1P0CF51 173 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 MMP9P14780 707 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 OR2T2Q6IF00 324 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 OR1K1Q8NGR3 316 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 SIRT7Q9NRC8 400 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 CACNG5Q9UF02 275 aa12.05□□□□□ -0.48
RAPGEF3-218ENST00000548919 NKX6-1P78426 367 aaPredicted RBP12.04□□□□□ -0.48
RAPGEF3-218ENST00000548919 ZNF324BQ6AW86 544 aaPredicted RBP12.04□□□□□ -0.48
RAPGEF3-218ENST00000548919 ZNF787Q6DD87 383 aa12.04□□□□□ -0.48
RAPGEF3-218ENST00000548919 MKXQ8IYA7 352 aa12.04□□□□□ -0.48
RAPGEF3-218ENST00000548919 OR10J5Q8NHC4 309 aa12.04□□□□□ -0.48
RAPGEF3-218ENST00000548919 FAM210BQ96KR6 192 aa12.04□□□□□ -0.48
RAPGEF3-218ENST00000548919 RHOVQ96L33 236 aa12.04□□□□□ -0.48
RAPGEF3-218ENST00000548919 KIAA2026Q5HYC2 2103 aa12.04□□□□□ -0.48
RAPGEF3-218ENST00000548919 DNAJC13O75165 2243 aa12.04□□□□□ -0.48
RAPGEF3-218ENST00000548919 CXorf65A6NEN9 183 aa12.04□□□□□ -0.48
RAPGEF3-218ENST00000548919 ZNF729A6NN14 1252 aaPredicted RBP12.04□□□□□ -0.48
RAPGEF3-218ENST00000548919 IGKV1-39P01597 117 aa12.04□□□□□ -0.48
RAPGEF3-218ENST00000548919 IGKV1D-39P04432 117 aa12.04□□□□□ -0.48
RAPGEF3-218ENST00000548919 ZNF880Q6PDB4 577 aa12.04□□□□□ -0.48
RAPGEF3-218ENST00000548919 HIST3H2BBQ8N257 126 aa12.04□□□□□ -0.48
RAPGEF3-218ENST00000548919 PSMF1Q92530 271 aa12.04□□□□□ -0.48
RAPGEF3-218ENST00000548919 CLDN23Q96B33 292 aa12.04□□□□□ -0.48
RAPGEF3-218ENST00000548919 PPP1R3CQ9UQK1 317 aa12.04□□□□□ -0.48
RAPGEF3-218ENST00000548919 OR2W1Q9Y3N9 320 aa12.04□□□□□ -0.48
RAPGEF3-218ENST00000548919 TRAV24A0A0B4J272 114 aa12.03□□□□□ -0.48
RAPGEF3-218ENST00000548919 PATE3B3GLJ2 98 aa12.03□□□□□ -0.48
RAPGEF3-218ENST00000548919 PPP1R2P9O14990 202 aa12.03□□□□□ -0.48
RAPGEF3-218ENST00000548919 DFFBO76075 338 aa12.03□□□□□ -0.48
RAPGEF3-218ENST00000548919 CELA3AP09093 270 aa12.03□□□□□ -0.48
RAPGEF3-218ENST00000548919 ZNF16P17020 682 aaPredicted RBP12.03□□□□□ -0.48
RAPGEF3-218ENST00000548919 SRSF7Q16629 238 aaKnown RBP eCLIP12.03□□□□□ -0.48
RAPGEF3-218ENST00000548919 SPINK14Q6IE38 97 aa12.03□□□□□ -0.48
RAPGEF3-218ENST00000548919 TUSC5Q8IXB3 177 aa12.03□□□□□ -0.48
RAPGEF3-218ENST00000548919 TREM2Q9NZC2 230 aa12.03□□□□□ -0.48
RAPGEF3-218ENST00000548919 TCFL5Q9UL49 500 aa12.03□□□□□ -0.48
RAPGEF3-218ENST00000548919 BCL2P10415 239 aa12.03□□□□□ -0.48
RAPGEF3-218ENST00000548919 FABP4P15090 132 aa12.03□□□□□ -0.48
RAPGEF3-218ENST00000548919 ZFP36L1Q07352 338 aaKnown RBP12.03□□□□□ -0.48
RAPGEF3-218ENST00000548919 PPP1R32Q7Z5V6 425 aa12.03□□□□□ -0.48
RAPGEF3-218ENST00000548919 HAPLN4Q86UW8 402 aa12.03□□□□□ -0.48
RAPGEF3-218ENST00000548919 SCGB1C1Q8TD33 95 aa12.03□□□□□ -0.48
RAPGEF3-218ENST00000548919 SEC14L6B5MCN3 397 aa12.02□□□□□ -0.48
RAPGEF3-218ENST00000548919 RHBDL1O75783 438 aa12.02□□□□□ -0.48
RAPGEF3-218ENST00000548919 CNOT4O95628 575 aaKnown RBP12.02□□□□□ -0.48
RAPGEF3-218ENST00000548919 ELLP55199 621 aaPredicted RBP12.02□□□□□ -0.48
RAPGEF3-218ENST00000548919 GFRA1P56159 465 aa12.02□□□□□ -0.48
RAPGEF3-218ENST00000548919 OR8G1Q15617 311 aa12.02□□□□□ -0.48
RAPGEF3-218ENST00000548919 DPPA3Q6W0C5 159 aa12.02□□□□□ -0.48
RAPGEF3-218ENST00000548919 H1FOOQ8IZA3 346 aaPredicted RBP12.02□□□□□ -0.48
RAPGEF3-218ENST00000548919 TDHQ8IZJ6 230 aa12.02□□□□□ -0.48
RAPGEF3-218ENST00000548919 IL22RA2Q969J5 263 aa12.02□□□□□ -0.48
RAPGEF3-218ENST00000548919 RCC1LQ96I51 464 aaKnown RBP12.02□□□□□ -0.48
RAPGEF3-218ENST00000548919 PRDM13Q9H4Q3 707 aa12.02□□□□□ -0.48
RAPGEF3-218ENST00000548919 URB1O60287 2271 aaKnown RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms