RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 OR14A2Q96R54 314 aa13.7□□□□□ -0.22
CHMP1A-205ENST00000548650 P2RX4Q99571 388 aa13.7□□□□□ -0.22
CHMP1A-205ENST00000548650 GPR61Q9BZJ8 451 aa13.7□□□□□ -0.22
CHMP1A-205ENST00000548650 SPACA1Q9HBV2 294 aa13.7□□□□□ -0.22
CHMP1A-205ENST00000548650 ZFP57Q9NU63 452 aa13.7□□□□□ -0.22
CHMP1A-205ENST00000548650 LIN7CQ9NUP9 197 aaKnown RBP13.7□□□□□ -0.22
CHMP1A-205ENST00000548650 MRPS28Q9Y2Q9 187 aaKnown RBP13.7□□□□□ -0.22
CHMP1A-205ENST00000548650 NUDT19A8MXV4 375 aa13.69□□□□□ -0.22
CHMP1A-205ENST00000548650 IL3RAP26951 378 aa13.69□□□□□ -0.22
CHMP1A-205ENST00000548650 ZNF137PP52743 207 aa13.69□□□□□ -0.22
CHMP1A-205ENST00000548650 DOC2BQ14184 412 aa13.69□□□□□ -0.22
CHMP1A-205ENST00000548650 GPR176Q14439 515 aa13.69□□□□□ -0.22
CHMP1A-205ENST00000548650 LYPD6Q86Y78 171 aa13.69□□□□□ -0.22
CHMP1A-205ENST00000548650 GAPTQ8N292 157 aa13.69□□□□□ -0.22
CHMP1A-205ENST00000548650 STX19Q8N4C7 294 aa13.69□□□□□ -0.22
CHMP1A-205ENST00000548650 JAGN1Q8N5M9 183 aa13.69□□□□□ -0.22
CHMP1A-205ENST00000548650 OR2T10Q8NGZ9 312 aa13.69□□□□□ -0.22
CHMP1A-205ENST00000548650 CYYR1Q96J86 154 aa13.69□□□□□ -0.22
CHMP1A-205ENST00000548650 ABCG5Q9H222 651 aa13.69□□□□□ -0.22
CHMP1A-205ENST00000548650 DNAH9Q9NYC9 4486 aa13.68□□□□□ -0.22
CHMP1A-205ENST00000548650 ZNF736B4DX44 427 aaPredicted RBP13.68□□□□□ -0.22
CHMP1A-205ENST00000548650 ANKRD65E5RJM6 399 aa13.68□□□□□ -0.22
CHMP1A-205ENST00000548650 AP4M1O00189 453 aa13.68□□□□□ -0.22
CHMP1A-205ENST00000548650 ADARB1P78563 741 aaKnown RBP13.68□□□□□ -0.22
CHMP1A-205ENST00000548650 MED21Q13503 144 aa13.68□□□□□ -0.22
CHMP1A-205ENST00000548650 LRRC36Q1X8D7 754 aa13.68□□□□□ -0.22
CHMP1A-205ENST00000548650 TMEM30BQ3MIR4 351 aa13.68□□□□□ -0.22
CHMP1A-205ENST00000548650 TTC23Q5W5X9 447 aa13.68□□□□□ -0.22
CHMP1A-205ENST00000548650 RAB12Q6IQ22 244 aa13.68□□□□□ -0.22
CHMP1A-205ENST00000548650 GLIPR1L1Q6UWM5 242 aa13.68□□□□□ -0.22
CHMP1A-205ENST00000548650 SLC25A48Q6ZT89 311 aaKnown RBP13.68□□□□□ -0.22
CHMP1A-205ENST00000548650 ZNF695Q8IW36 515 aa13.68□□□□□ -0.22
CHMP1A-205ENST00000548650 SETD9Q8NE22 299 aa13.68□□□□□ -0.22
CHMP1A-205ENST00000548650 DPF1Q92782 380 aa13.68□□□□□ -0.22
CHMP1A-205ENST00000548650 MRPS24Q96EL2 167 aaKnown RBP13.68□□□□□ -0.22
CHMP1A-205ENST00000548650 DERL3Q96Q80 235 aa13.68□□□□□ -0.22
CHMP1A-205ENST00000548650 PLSCR3Q9NRY6 295 aa13.68□□□□□ -0.22
CHMP1A-205ENST00000548650 ETAA1Q9NY74 926 aa13.68□□□□□ -0.22
CHMP1A-205ENST00000548650 A0A1W2PPK0 400 aa13.67□□□□□ -0.22
CHMP1A-205ENST00000548650 NCBP2LA6PVI3 153 aaKnown RBP13.67□□□□□ -0.22
CHMP1A-205ENST00000548650 TXNL1O43396 289 aa13.67□□□□□ -0.22
CHMP1A-205ENST00000548650 MOSP00540 346 aa13.67□□□□□ -0.22
CHMP1A-205ENST00000548650 CD1BP29016 333 aa13.67□□□□□ -0.22
CHMP1A-205ENST00000548650 MYCNOSP40205 109 aa13.67□□□□□ -0.22
CHMP1A-205ENST00000548650 TAS2R43P59537 309 aa13.67□□□□□ -0.22
CHMP1A-205ENST00000548650 ST3GAL4Q11206 333 aa13.67□□□□□ -0.22
CHMP1A-205ENST00000548650 C6orf183Q5T699 404 aa13.67□□□□□ -0.22
CHMP1A-205ENST00000548650 SYT6Q5T7P8 510 aaPredicted RBP13.67□□□□□ -0.22
CHMP1A-205ENST00000548650 AWAT2Q6E213 333 aa13.67□□□□□ -0.22
CHMP1A-205ENST00000548650 LAIR2Q6ISS4 152 aa13.67□□□□□ -0.22
CHMP1A-205ENST00000548650 C11orf87Q6NUJ2 197 aa13.67□□□□□ -0.22
CHMP1A-205ENST00000548650 FAM71E2Q8N5Q1 922 aa13.67□□□□□ -0.22
CHMP1A-205ENST00000548650 PACRGLQ8N7B6 248 aa13.67□□□□□ -0.22
CHMP1A-205ENST00000548650 OR4K15Q8NH41 348 aa13.67□□□□□ -0.22
CHMP1A-205ENST00000548650 OR1L1Q8NH94 360 aa13.67□□□□□ -0.22
CHMP1A-205ENST00000548650 GGHQ92820 318 aa13.67□□□□□ -0.22
CHMP1A-205ENST00000548650 RBMXL1Q96E39 390 aaKnown RBP13.67□□□□□ -0.22
CHMP1A-205ENST00000548650 CHCHD3Q9NX63 227 aaKnown RBP13.67□□□□□ -0.22
CHMP1A-205ENST00000548650 GNG12Q9UBI6 72 aa13.67□□□□□ -0.22
CHMP1A-205ENST00000548650 PNMA8CA0A1B0GUJ8 204 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 FAM90A10PA6NDY2 464 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 FAM90A7PA6NKC0 464 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 FAM90A23PA8MXZ1 464 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 MCRIP1C9JLW8 97 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 H0YHG0 523 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 SPINT2O43291 252 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 SC5DO75845 299 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 HBZP02008 142 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 RPLP1P05386 114 aaKnown RBP13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 MGMTP16455 207 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 RCC1P18754 421 aaPredicted RBP13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 ZNF134P52741 427 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 CFHR3Q02985 330 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 CT45A1Q5HYN5 189 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 TEX38Q6PEX7 206 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 OR10V1Q8NGI7 309 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 CT45A3Q8NHU0 189 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 RAX2Q96IS3 184 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 Q96M66 194 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 DUX3Q96PT4 197 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 S1PR3Q99500 378 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 HSPB9Q9BQS6 159 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 MCRIP2Q9BUT9 160 aaKnown RBP13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 BANF2Q9H503 90 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 C8orf4Q9NR00 106 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 TRAPPC2LQ9UL33 140 aa13.66□□□□□ -0.22
CHMP1A-205ENST00000548650 CA11O75493 328 aa13.65□□□□□ -0.22
CHMP1A-205ENST00000548650 MAS1P04201 325 aa13.65□□□□□ -0.22
CHMP1A-205ENST00000548650 GNAO1P09471 354 aa13.65□□□□□ -0.22
CHMP1A-205ENST00000548650 VHLP40337 213 aa13.65□□□□□ -0.22
CHMP1A-205ENST00000548650 VAX1Q5SQQ9 334 aa13.65□□□□□ -0.22
CHMP1A-205ENST00000548650 SIGIRRQ6IA17 410 aa13.65□□□□□ -0.22
CHMP1A-205ENST00000548650 TRAT1Q6PIZ9 186 aa13.65□□□□□ -0.22
CHMP1A-205ENST00000548650 LCNL1Q6ZST4 164 aa13.65□□□□□ -0.22
CHMP1A-205ENST00000548650 CDH26Q8IXH8 852 aa13.65□□□□□ -0.22
CHMP1A-205ENST00000548650 PRR18Q8N4B5 295 aa13.65□□□□□ -0.22
CHMP1A-205ENST00000548650 NKAIN3Q8N8D7 197 aa13.65□□□□□ -0.22
CHMP1A-205ENST00000548650 RNF152Q8N8N0 203 aa13.65□□□□□ -0.22
CHMP1A-205ENST00000548650 OR8H1Q8NGG4 311 aa13.65□□□□□ -0.22
CHMP1A-205ENST00000548650 SELENOIQ9C0D9 397 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms