RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 CLDN23Q96B33 292 aa8.43□□□□□ -1.06
SMARCD1-205ENST00000548573 CABLES2Q9BTV7 478 aa8.43□□□□□ -1.06
SMARCD1-205ENST00000548573 GPR61Q9BZJ8 451 aa8.43□□□□□ -1.06
SMARCD1-205ENST00000548573 LINC00470Q9BZP3 86 aa8.43□□□□□ -1.06
SMARCD1-205ENST00000548573 SDF2L1Q9HCN8 221 aa8.43□□□□□ -1.06
SMARCD1-205ENST00000548573 TRIOO75962 3097 aa8.43□□□□□ -1.06
SMARCD1-205ENST00000548573 CABIN1Q9Y6J0 2220 aa8.43□□□□□ -1.06
SMARCD1-205ENST00000548573 LRRC3CA6NJW4 275 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 H3BP45 60 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 PHOX2AO14813 284 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 SYNGR2O43760 224 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 OPN1MWP04001 364 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 RFPL3SP0C7P2 107 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 OPN1MW2P0DN77 364 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 OPN1MW3P0DN78 364 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 GPX4P36969 197 aaPredicted RBP8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 FOLR3P41439 243 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 CXCL12P48061 93 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 TMEM267Q0VDI3 215 aaPredicted RBP8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 WIPI1Q5MNZ9 446 aaPredicted RBP8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 LYSMD4Q5XG99 296 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 CDPF1Q6NVV7 123 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 MRPL21Q7Z2W9 205 aaKnown RBP8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 OR10J5Q8NHC4 309 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 IFI44Q8TCB0 444 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 ABHD3Q8WU67 409 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 FRZBQ92765 325 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 PARD6GQ9BYG4 376 aaPredicted RBP8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 ZNF665Q9H7R5 613 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 IL36RNQ9UBH0 155 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 WNT16Q9UBV4 365 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 VAX2Q9UIW0 290 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 IGKV3D-15A0A087WSY6 115 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 ZFP92A6NM28 416 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 NPIPB11E5RHQ5 1161 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 HSPB6O14558 160 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 ATXN7O15265 892 aaPredicted RBP8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 SS18L1O75177 396 aaPredicted RBP8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 TRAPPC6AO75865 159 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 IGHEP01854 428 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 RD3LP0DJH9 198 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 PSG2P11465 335 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 ZFP36L1Q07352 338 aaKnown RBP8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 TRA2AQ13595 282 aaKnown RBP eCLIP8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 ZNF726P1Q15940 193 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 LRRC75BQ2VPJ9 315 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 GFI1BQ5VTD9 330 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 MRGPRGQ86SM5 289 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 ZNF525Q8N782 197 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 PSMF1Q92530 271 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 APOBEC3DQ96AK3 386 aaPredicted RBP8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 PINX1Q96BK5 328 aaKnown RBP8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 RSG1Q9BU20 258 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 CRIM1Q9NZV1 1036 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 OR14J1Q9UGF5 321 aa8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 TNRC6AQ8NDV7 1962 aaKnown RBP8.42□□□□□ -1.06
SMARCD1-205ENST00000548573 DEGS1O15121 323 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 MRPL33O75394 65 aaKnown RBP8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 IFNA1P01562 189 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 HLA-HP01893 362 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 GFRA1P56159 465 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 HBG1P69891 147 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 HBG2P69892 147 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 ARF1P84077 181 aaKnown RBP8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 HLA-BQ31612 363 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 TMEM41BQ5BJD5 291 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 LCN15Q6UWW0 184 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 C20orf204Q6ZNR8 217 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 Q6ZRM9 215 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 OR10V1Q8NGI7 309 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 OR51H1Q8NH63 302 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 RNASE11Q8TAA1 199 aaKnown RBP8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 ZNF845Q96IR2 970 aaPredicted RBP8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 HIST1H2AAQ96QV6 131 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 CDH20Q9HBT6 801 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 PSENENQ9NZ42 101 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 LRFN1Q9P244 771 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 ERRFI1Q9UJM3 462 aaPredicted RBP8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 PITPNC1Q9UKF7 332 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 C5orf49A4QMS7 147 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 CD300LBA8K4G0 201 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 SYNGR1O43759 233 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 IGKV1-39P01597 117 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 IGKV1D-39P04432 117 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 CCNOP22674 350 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 IGFBP4P22692 258 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 MDH2P40926 338 aaKnown RBP8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 TCEAL6Q6IPX3 200 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 AGMATQ9BSE5 352 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 STRADBQ9C0K7 418 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 WDR61Q9GZS3 305 aaKnown RBP8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 VSIRQ9H7M9 311 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 PRDM6Q9NQX0 595 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 CACNG5Q9UF02 275 aa8.41□□□□□ -1.06
SMARCD1-205ENST00000548573 NCKAP5O14513 1909 aa8.4□□□□□ -1.06
SMARCD1-205ENST00000548573 TRAV24A0A0B4J272 114 aa8.4□□□□□ -1.06
SMARCD1-205ENST00000548573 OR5B21A6NL26 309 aa8.4□□□□□ -1.06
SMARCD1-205ENST00000548573 NTN3O00634 580 aaPredicted RBP8.4□□□□□ -1.06
SMARCD1-205ENST00000548573 IFNA10P01566 189 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms