RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 MOB4Q9Y3A3 225 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 HSPE1-MOB4S4R3N1 261 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 TRAV8-7A0A075B6U6 113 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 TRBV5-5A0A0J9YX44 114 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 A0A1W2PPI3 338 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 MAGEA13PA6NCF6 341 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 LINC01548A6NM66 108 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 MCRIP1C9JLW8 97 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 C15orf65H3BRN8 121 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 HSD17B6O14756 317 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 MPIG6BO95866 241 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 MAS1P04201 325 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 CELP19835 753 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 VHLP40337 213 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 RPS11P62280 158 aaKnown RBP eCLIP5.31□□□□□ -1.56
SCAF11-211ENST00000547950 SLC35A2P78381 396 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 ADARB1P78563 741 aaKnown RBP5.31□□□□□ -1.56
SCAF11-211ENST00000547950 PAX5Q02548 391 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 GPR176Q14439 515 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 MPV17LQ2QL34 196 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 YIF1BQ5BJH7 314 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 DEFB121Q5J5C9 76 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 NHLRC3Q5JS37 347 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 SYT6Q5T7P8 510 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-211ENST00000547950 OR8H3Q8N146 312 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 JAGN1Q8N5M9 183 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 C5orf56Q8N8D9 126 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 BPIFB6Q8NFQ5 453 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 OR4K15Q8NH41 348 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 RBMXL1Q96E39 390 aaKnown RBP5.31□□□□□ -1.56
SCAF11-211ENST00000547950 OR14A2Q96R54 314 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 SELENOIQ9C0D9 397 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 BANF2Q9H503 90 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 IFT22Q9H7X7 185 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 PEX16Q9Y5Y5 336 aa5.31□□□□□ -1.56
SCAF11-211ENST00000547950 TRBV5-7A0A0A0MS05 114 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 IGHV1-3A0A0C4DH29 117 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 UBE2QL1A1L167 161 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 EFCAB10A6NFE3 127 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 NUDT19A8MXV4 375 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 ZNF736B4DX44 427 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-211ENST00000547950 C12orf77C9JDV5 145 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 AIPO00170 330 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 SPINT2O43291 252 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 ORC5O43913 435 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 EIF4EBP3O60516 100 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-211ENST00000547950 GPX5O75715 221 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 CRTAPO75718 401 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-211ENST00000547950 GNAO1P09471 354 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 HOXD3P31249 432 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-211ENST00000547950 CAPGP40121 348 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 RCN1Q15293 331 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 AWAT2Q6E213 333 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 RAB12Q6IQ22 244 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 LAIR2Q6ISS4 152 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 ZNF497Q6ZNH5 498 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 AHSA2Q719I0 299 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 SLC35E3Q7Z769 313 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 LINC00596Q86U02 117 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 C8orf59Q8N0T1 100 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-211ENST00000547950 PACRGLQ8N7B6 248 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 ZNF485Q8NCK3 441 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 OR10V1Q8NGI7 309 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 OR52M1Q8NGK5 317 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 OR2T10Q8NGZ9 312 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 OR1L1Q8NH94 360 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 CHPT1Q8WUD6 406 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 EAF1Q96JC9 268 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-211ENST00000547950 PGLYRP3Q96LB9 341 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 SPACA1Q9HBV2 294 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 GFOD1Q9NXC2 390 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 ETAA1Q9NY74 926 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 GNG12Q9UBI6 72 aa5.3□□□□□ -1.56
SCAF11-211ENST00000547950 TET2Q6N021 2002 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-211ENST00000547950 ANKRD65E5RJM6 399 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 PTGES3LE9PB15 166 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 MYL12BO14950 172 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 SLC31A2O15432 143 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 FGF16O43320 207 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 HBZP02008 142 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 MGMTP16455 207 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 RCC1P18754 421 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-211ENST00000547950 FUT3P21217 361 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 IL3RAP26951 378 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 ZNF134P52741 427 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 RAB25P57735 213 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 TAS2R43P59537 309 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 KRTAP10-11P60412 298 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 RPL23AP62750 156 aaKnown RBP5.29□□□□□ -1.56
SCAF11-211ENST00000547950 SLC35B1P78383 322 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 ZNF816Q0VGE8 651 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-211ENST00000547950 EBI3Q14213 229 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 CT45A1Q5HYN5 189 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 C18orf65Q6ZTR6 163 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 OR2W3Q7Z3T1 314 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 C5orf24Q7Z6I8 188 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 FOXRED2Q8IWF2 684 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 MRPL41Q8IXM3 137 aaKnown RBP5.29□□□□□ -1.56
SCAF11-211ENST00000547950 LINC00311Q8N616 119 aa5.29□□□□□ -1.56
SCAF11-211ENST00000547950 NANOGP1Q8N7R0 232 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms