RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 PRR18Q8N4B5 295 aa21.04■□□□□ 0.96
SRSF9-202ENST00000546942 NKAIN3Q8N8D7 197 aa21.04■□□□□ 0.96
SRSF9-202ENST00000546942 OR4F17Q8NGA8 305 aa21.04■□□□□ 0.96
SRSF9-202ENST00000546942 OR4F4Q96R69 305 aa21.04■□□□□ 0.96
SRSF9-202ENST00000546942 ISYNA1Q9NPH2 558 aa21.04■□□□□ 0.96
SRSF9-202ENST00000546942 RCC2Q9P258 522 aaKnown RBP21.04■□□□□ 0.96
SRSF9-202ENST00000546942 MOB4Q9Y3A3 225 aa21.04■□□□□ 0.96
SRSF9-202ENST00000546942 PRKDCP78527 4128 aaKnown RBP21.04■□□□□ 0.96
SRSF9-202ENST00000546942 UBE2QL1A1L167 161 aa21.03■□□□□ 0.96
SRSF9-202ENST00000546942 FAM90A18PA6NE21 464 aa21.03■□□□□ 0.96
SRSF9-202ENST00000546942 FAM90A16PA6NEW6 464 aa21.03■□□□□ 0.96
SRSF9-202ENST00000546942 FAM90A20PA6NIJ5 464 aa21.03■□□□□ 0.96
SRSF9-202ENST00000546942 FAM90A9PA6NNJ1 464 aa21.03■□□□□ 0.96
SRSF9-202ENST00000546942 FAM90A12PA8MX19 464 aa21.03■□□□□ 0.96
SRSF9-202ENST00000546942 FAM90A5PA8MXJ8 464 aa21.03■□□□□ 0.96
SRSF9-202ENST00000546942 M0QZK8 103 aa21.03■□□□□ 0.96
SRSF9-202ENST00000546942 DENRO43583 198 aaKnown RBP21.03■□□□□ 0.96
SRSF9-202ENST00000546942 ORC5O43913 435 aa21.03■□□□□ 0.96
SRSF9-202ENST00000546942 FAM90A15PP0C7V4 464 aa21.03■□□□□ 0.96
SRSF9-202ENST00000546942 FAM90A13PP0C7W8 464 aa21.03■□□□□ 0.96
SRSF9-202ENST00000546942 FAM90A14PP0C7W9 464 aa21.03■□□□□ 0.96
SRSF9-202ENST00000546942 FAM90A24PP0C7X0 464 aa21.03■□□□□ 0.96
SRSF9-202ENST00000546942 TMEM11P17152 192 aa21.03■□□□□ 0.96
SRSF9-202ENST00000546942 LYPD6Q86Y78 171 aa21.03■□□□□ 0.96
SRSF9-202ENST00000546942 CYYR1Q96J86 154 aa21.03■□□□□ 0.96
SRSF9-202ENST00000546942 GFOD1Q9NXC2 390 aa21.03■□□□□ 0.96
SRSF9-202ENST00000546942 CCRL2O00421 344 aa21.02■□□□□ 0.96
SRSF9-202ENST00000546942 HSD17B6O14756 317 aa21.02■□□□□ 0.96
SRSF9-202ENST00000546942 MRPS14O60783 128 aaKnown RBP21.02■□□□□ 0.96
SRSF9-202ENST00000546942 IGKV1D-33P01593 117 aa21.02■□□□□ 0.96
SRSF9-202ENST00000546942 IGKV1-33P01594 117 aa21.02■□□□□ 0.96
SRSF9-202ENST00000546942 C10orf99Q6UWK7 81 aa21.02■□□□□ 0.96
SRSF9-202ENST00000546942 OR8H3Q8N146 312 aa21.02■□□□□ 0.96
SRSF9-202ENST00000546942 OR52M1Q8NGK5 317 aa21.02■□□□□ 0.96
SRSF9-202ENST00000546942 UQCC2Q9BRT2 126 aa21.02■□□□□ 0.96
SRSF9-202ENST00000546942 TCRBV4S1A1TA0A5B7 111 aa21.01■□□□□ 0.95
SRSF9-202ENST00000546942 C12orf77C9JDV5 145 aa21.01■□□□□ 0.95
SRSF9-202ENST00000546942 GAPDHP04406 335 aaKnown RBP21.01■□□□□ 0.95
SRSF9-202ENST00000546942 FUT3P21217 361 aa21.01■□□□□ 0.95
SRSF9-202ENST00000546942 LOXL3P58215 753 aa21.01■□□□□ 0.95
SRSF9-202ENST00000546942 CD83Q01151 205 aa21.01■□□□□ 0.95
SRSF9-202ENST00000546942 UNQ9370/PRO34162Q6UXP9 181 aa21.01■□□□□ 0.95
SRSF9-202ENST00000546942 Q96M66 194 aa21.01■□□□□ 0.95
SRSF9-202ENST00000546942 CCDC90BQ9GZT6 254 aa21.01■□□□□ 0.95
SRSF9-202ENST00000546942 IGHV3-72A0A0B4J1Y9 119 aa21■□□□□ 0.95
SRSF9-202ENST00000546942 SPINT2O43291 252 aa21■□□□□ 0.95
SRSF9-202ENST00000546942 MPIG6BO95866 241 aa21■□□□□ 0.95
SRSF9-202ENST00000546942 GP2P55259 537 aaKnown RBP21■□□□□ 0.95
SRSF9-202ENST00000546942 TCTEX1D4Q5JR98 221 aa21■□□□□ 0.95
SRSF9-202ENST00000546942 CEACAM19Q7Z692 300 aa21■□□□□ 0.95
SRSF9-202ENST00000546942 OR10V1Q8NGI7 309 aa21■□□□□ 0.95
SRSF9-202ENST00000546942 OR1L1Q8NH94 360 aa21■□□□□ 0.95
SRSF9-202ENST00000546942 UFD1Q92890 307 aa21■□□□□ 0.95
SRSF9-202ENST00000546942 YTHDF1Q9BYJ9 559 aaKnown RBP21■□□□□ 0.95
SRSF9-202ENST00000546942 GNG12Q9UBI6 72 aa21■□□□□ 0.95
SRSF9-202ENST00000546942 IGHV1-3A0A0C4DH29 117 aa20.99■□□□□ 0.95
SRSF9-202ENST00000546942 FAM90A10PA6NDY2 464 aa20.99■□□□□ 0.95
SRSF9-202ENST00000546942 FAM90A7PA6NKC0 464 aa20.99■□□□□ 0.95
SRSF9-202ENST00000546942 FAM90A23PA8MXZ1 464 aa20.99■□□□□ 0.95
SRSF9-202ENST00000546942 RCC1P18754 421 aaPredicted RBP20.99■□□□□ 0.95
SRSF9-202ENST00000546942 GABARAPL2P60520 117 aa20.99■□□□□ 0.95
SRSF9-202ENST00000546942 TPBGQ13641 420 aa20.99■□□□□ 0.95
SRSF9-202ENST00000546942 KHDC1LQ5JSQ8 128 aa20.99■□□□□ 0.95
SRSF9-202ENST00000546942 NKAPLQ5M9Q1 402 aa20.99■□□□□ 0.95
SRSF9-202ENST00000546942 C6orf183Q5T699 404 aa20.99■□□□□ 0.95
SRSF9-202ENST00000546942 LIPKQ5VXJ0 399 aa20.99■□□□□ 0.95
SRSF9-202ENST00000546942 SIGIRRQ6IA17 410 aa20.99■□□□□ 0.95
SRSF9-202ENST00000546942 OR10K2Q6IF99 312 aa20.99■□□□□ 0.95
SRSF9-202ENST00000546942 CST11Q9H112 138 aa20.99■□□□□ 0.95
SRSF9-202ENST00000546942 SLC31A2O15432 143 aa20.98■□□□□ 0.95
SRSF9-202ENST00000546942 HBZP02008 142 aa20.98■□□□□ 0.95
SRSF9-202ENST00000546942 HSMCR30P0CW71 290 aa20.98■□□□□ 0.95
SRSF9-202ENST00000546942 PSMA1P25786 263 aaKnown RBP20.98■□□□□ 0.95
SRSF9-202ENST00000546942 ZNF816Q0VGE8 651 aaPredicted RBP20.98■□□□□ 0.95
SRSF9-202ENST00000546942 MLLT11Q13015 90 aaPredicted RBP20.98■□□□□ 0.95
SRSF9-202ENST00000546942 TRAM1Q15629 374 aa20.98■□□□□ 0.95
SRSF9-202ENST00000546942 TBCEQ15813 527 aaPredicted RBP20.98■□□□□ 0.95
SRSF9-202ENST00000546942 BEAN1Q3B7T3 259 aa20.98■□□□□ 0.95
SRSF9-202ENST00000546942 OXLD1Q5BKU9 147 aa20.98■□□□□ 0.95
SRSF9-202ENST00000546942 SAMD5Q5TGI4 173 aa20.98■□□□□ 0.95
SRSF9-202ENST00000546942 GLT8D1Q68CQ7 371 aa20.98■□□□□ 0.95
SRSF9-202ENST00000546942 LRRTM1Q86UE6 522 aa20.98■□□□□ 0.95
SRSF9-202ENST00000546942 LINC00311Q8N616 119 aa20.98■□□□□ 0.95
SRSF9-202ENST00000546942 OR4X2Q8NGF9 303 aa20.98■□□□□ 0.95
SRSF9-202ENST00000546942 TMEM203Q969S6 136 aa20.98■□□□□ 0.95
SRSF9-202ENST00000546942 RAB9BQ9NP90 201 aa20.98■□□□□ 0.95
SRSF9-202ENST00000546942 NOTCH3Q9UM47 2321 aa20.98■□□□□ 0.95
SRSF9-202ENST00000546942 PRB2P02812 416 aaPredicted RBP20.97■□□□□ 0.95
SRSF9-202ENST00000546942 PF4V1P10720 104 aa20.97■□□□□ 0.95
SRSF9-202ENST00000546942 SRMP19623 302 aa20.97■□□□□ 0.95
SRSF9-202ENST00000546942 IL3RAP26951 378 aa20.97■□□□□ 0.95
SRSF9-202ENST00000546942 HSD17B12Q53GQ0 312 aa20.97■□□□□ 0.95
SRSF9-202ENST00000546942 C5orf24Q7Z6I8 188 aa20.97■□□□□ 0.95
SRSF9-202ENST00000546942 C5orf56Q8N8D9 126 aa20.97■□□□□ 0.95
SRSF9-202ENST00000546942 GHRLQ9UBU3 117 aa20.97■□□□□ 0.95
SRSF9-202ENST00000546942 TSSC4Q9Y5U2 329 aaPredicted RBP20.97■□□□□ 0.95
SRSF9-202ENST00000546942 NCBP2LA6PVI3 153 aaKnown RBP20.96■□□□□ 0.95
SRSF9-202ENST00000546942 PDCD6O75340 191 aa20.96■□□□□ 0.95
SRSF9-202ENST00000546942 C8orf31Q8N9H6 132 aa20.96■□□□□ 0.95
SRSF9-202ENST00000546942 PHYHIPQ92561 330 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms