RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 FAM90A13PP0C7W8 464 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 FAM90A14PP0C7W9 464 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 FAM90A24PP0C7X0 464 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 IAPPP10997 89 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 B4GALT1P15291 398 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 F2RP25116 425 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 RNPS1Q15287 305 aaKnown RBP12.16□□□□□ -0.46
SRP54-202ENST00000546080 NEK7Q8TDX7 302 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 TMEM38BQ9NVV0 291 aa12.16□□□□□ -0.46
SRP54-202ENST00000546080 PIGBOS1A0A0B4J2F0 54 aa12.15□□□□□ -0.46
SRP54-202ENST00000546080 HSPB6O14558 160 aa12.15□□□□□ -0.46
SRP54-202ENST00000546080 TNFSF11O14788 317 aa12.15□□□□□ -0.46
SRP54-202ENST00000546080 NAPSAO96009 420 aa12.15□□□□□ -0.46
SRP54-202ENST00000546080 CTXN2P0C2S0 81 aa12.15□□□□□ -0.46
SRP54-202ENST00000546080 SLC25A6P12236 298 aa12.15□□□□□ -0.46
SRP54-202ENST00000546080 BTF3P20290 206 aaKnown RBP12.15□□□□□ -0.46
SRP54-202ENST00000546080 GZMHP20718 246 aa12.15□□□□□ -0.46
SRP54-202ENST00000546080 BCL3P20749 454 aa12.15□□□□□ -0.46
SRP54-202ENST00000546080 ELLP55199 621 aaPredicted RBP12.15□□□□□ -0.46
SRP54-202ENST00000546080 CLDN15P56746 228 aa12.15□□□□□ -0.46
SRP54-202ENST00000546080 NXPH1P58417 271 aa12.15□□□□□ -0.46
SRP54-202ENST00000546080 FAM3BP58499 235 aaPredicted RBP12.15□□□□□ -0.46
SRP54-202ENST00000546080 PMS2P11Q13670 270 aa12.15□□□□□ -0.46
SRP54-202ENST00000546080 WDR74Q6RFH5 385 aaPredicted RBP12.15□□□□□ -0.46
SRP54-202ENST00000546080 OR51G1Q8NGK1 321 aa12.15□□□□□ -0.46
SRP54-202ENST00000546080 OR51H1Q8NH63 302 aa12.15□□□□□ -0.46
SRP54-202ENST00000546080 TMEM170AQ8WVE7 144 aa12.15□□□□□ -0.46
SRP54-202ENST00000546080 TMEM18Q96B42 140 aa12.15□□□□□ -0.46
SRP54-202ENST00000546080 PINX1Q96BK5 328 aaKnown RBP12.15□□□□□ -0.46
SRP54-202ENST00000546080 PSENENQ9NZ42 101 aa12.15□□□□□ -0.46
SRP54-202ENST00000546080 C19orf25Q9UFG5 118 aaPredicted RBP12.15□□□□□ -0.46
SRP54-202ENST00000546080 SCRG1O75711 98 aa12.15□□□□□ -0.47
SRP54-202ENST00000546080 KBTBD11O94819 623 aa12.15□□□□□ -0.47
SRP54-202ENST00000546080 PDLIM4P50479 330 aa12.15□□□□□ -0.47
SRP54-202ENST00000546080 HBG1P69891 147 aa12.15□□□□□ -0.47
SRP54-202ENST00000546080 HBG2P69892 147 aa12.15□□□□□ -0.47
SRP54-202ENST00000546080 PSG4Q00888 419 aa12.15□□□□□ -0.47
SRP54-202ENST00000546080 LRRC75BQ2VPJ9 315 aa12.15□□□□□ -0.47
SRP54-202ENST00000546080 KRTAP27-1Q3LI81 207 aa12.15□□□□□ -0.47
SRP54-202ENST00000546080 RPUSD4Q96CM3 377 aaKnown RBP12.15□□□□□ -0.47
SRP54-202ENST00000546080 OR6C1Q96RD1 312 aa12.15□□□□□ -0.47
SRP54-202ENST00000546080 WNT16Q9UBV4 365 aa12.15□□□□□ -0.47
SRP54-202ENST00000546080 MED12Q93074 2177 aa12.14□□□□□ -0.47
SRP54-202ENST00000546080 IGKV1-6A0A0C4DH72 117 aa12.14□□□□□ -0.47
SRP54-202ENST00000546080 KIAA1324LA8MWY0 1029 aaPredicted RBP12.14□□□□□ -0.47
SRP54-202ENST00000546080 SYNGR2O43760 224 aa12.14□□□□□ -0.47
SRP54-202ENST00000546080 PSG2P11465 335 aa12.14□□□□□ -0.47
SRP54-202ENST00000546080 NUBP1P53384 320 aa12.14□□□□□ -0.47
SRP54-202ENST00000546080 RPL23P62829 140 aaKnown RBP12.14□□□□□ -0.47
SRP54-202ENST00000546080 MEF2BQ02080 365 aaPredicted RBP12.14□□□□□ -0.47
SRP54-202ENST00000546080 ARL16Q0P5N6 197 aa12.14□□□□□ -0.47
SRP54-202ENST00000546080 IQCJQ1A5X6 159 aa12.14□□□□□ -0.47
SRP54-202ENST00000546080 IZUMO4Q1ZYL8 232 aa12.14□□□□□ -0.47
SRP54-202ENST00000546080 MRPL41Q8IXM3 137 aaKnown RBP12.14□□□□□ -0.47
SRP54-202ENST00000546080 LHX4Q969G2 390 aa12.14□□□□□ -0.47
SRP54-202ENST00000546080 ZNF845Q96IR2 970 aaPredicted RBP12.14□□□□□ -0.47
SRP54-202ENST00000546080 ADGRG7Q96K78 797 aa12.14□□□□□ -0.47
SRP54-202ENST00000546080 ALKBH3Q96Q83 286 aaPredicted RBP12.14□□□□□ -0.47
SRP54-202ENST00000546080 PCGF1Q9BSM1 259 aa12.14□□□□□ -0.47
SRP54-202ENST00000546080 SLC39A9Q9NUM3 307 aa12.14□□□□□ -0.47
SRP54-202ENST00000546080 ATP23Q9Y6H3 246 aa12.14□□□□□ -0.47
SRP54-202ENST00000546080 RTTNQ86VV8 2226 aa12.14□□□□□ -0.47
SRP54-202ENST00000546080 A0A0J9YW62 118 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 A0A1W2PPQ1 181 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 HRASP01112 189 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 DSCR4P56555 118 aaPredicted RBP12.13□□□□□ -0.47
SRP54-202ENST00000546080 TNFRSF9Q07011 255 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 CLEC12BQ2HXU8 276 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 SYT13Q7L8C5 426 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 TMEM37Q8WXS4 190 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 TMEM68Q96MH6 324 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 ATG101Q9BSB4 218 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 SRXN1Q9BYN0 137 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 WNT5BQ9H1J7 359 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 OR51I2Q9H344 312 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 CACNG5Q9UF02 275 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 FUT9Q9Y231 359 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 LRRC3CA6NJW4 275 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 CD300LBA8K4G0 201 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 OR4A8P0C604 315 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 CCKARP32238 428 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 CASP6P55212 293 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 FGF12P61328 243 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 PAX5Q02548 391 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 SHHQ15465 462 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 ACOT6Q3I5F7 207 aaPredicted RBP12.13□□□□□ -0.47
SRP54-202ENST00000546080 Q8NFD4 153 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 ELOVL1Q9BW60 279 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 OR2H1Q9GZK4 316 aa12.13□□□□□ -0.47
SRP54-202ENST00000546080 WDR61Q9GZS3 305 aaKnown RBP12.13□□□□□ -0.47
SRP54-202ENST00000546080 EDN3P14138 238 aa12.12□□□□□ -0.47
SRP54-202ENST00000546080 LIFP15018 202 aa12.12□□□□□ -0.47
SRP54-202ENST00000546080 RTP5Q14D33 572 aa12.12□□□□□ -0.47
SRP54-202ENST00000546080 ACTL10Q5JWF8 245 aa12.12□□□□□ -0.47
SRP54-202ENST00000546080 ZNF468Q5VIY5 522 aaPredicted RBP12.12□□□□□ -0.47
SRP54-202ENST00000546080 Q6ZRM9 215 aa12.12□□□□□ -0.47
SRP54-202ENST00000546080 CENPVQ7Z7K6 275 aaPredicted RBP12.12□□□□□ -0.47
SRP54-202ENST00000546080 CPT1CQ8TCG5 803 aa12.12□□□□□ -0.47
SRP54-202ENST00000546080 G3V3Y1 287 aa12.12□□□□□ -0.47
SRP54-202ENST00000546080 PSMB3P49720 205 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms