RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 ZNF329Q86UD4 541 aa18■□□□□ 0.47
CHD4-214ENST00000545942 NKAIN3Q8N8D7 197 aa18■□□□□ 0.47
CHD4-214ENST00000545942 BPIFB6Q8NFQ5 453 aa18■□□□□ 0.47
CHD4-214ENST00000545942 AURKAIP1Q9NWT8 199 aaPredicted RBP18■□□□□ 0.47
CHD4-214ENST00000545942 IGHV3-43A0A0B4J1X8 118 aa17.99■□□□□ 0.47
CHD4-214ENST00000545942 FAM90A10PA6NDY2 464 aa17.99■□□□□ 0.47
CHD4-214ENST00000545942 FAM90A7PA6NKC0 464 aa17.99■□□□□ 0.47
CHD4-214ENST00000545942 FAM90A23PA8MXZ1 464 aa17.99■□□□□ 0.47
CHD4-214ENST00000545942 CASQ2O14958 399 aaPredicted RBP17.99■□□□□ 0.47
CHD4-214ENST00000545942 SPINT2O43291 252 aa17.99■□□□□ 0.47
CHD4-214ENST00000545942 IGHV3-43DP0DP04 118 aa17.99■□□□□ 0.47
CHD4-214ENST00000545942 IL3RAP26951 378 aa17.99■□□□□ 0.47
CHD4-214ENST00000545942 MAPK3P27361 379 aaPredicted RBP17.99■□□□□ 0.47
CHD4-214ENST00000545942 TMEM30BQ3MIR4 351 aa17.99■□□□□ 0.47
CHD4-214ENST00000545942 SYT6Q5T7P8 510 aaPredicted RBP17.99■□□□□ 0.47
CHD4-214ENST00000545942 LYPD6Q86Y78 171 aa17.99■□□□□ 0.47
CHD4-214ENST00000545942 IZUMO1Q8IYV9 350 aa17.99■□□□□ 0.47
CHD4-214ENST00000545942 SELENOIQ9C0D9 397 aa17.99■□□□□ 0.47
CHD4-214ENST00000545942 BANF2Q9H503 90 aa17.99■□□□□ 0.47
CHD4-214ENST00000545942 ERGIC3Q9Y282 383 aa17.99■□□□□ 0.47
CHD4-214ENST00000545942 IGHV3-72A0A0B4J1Y9 119 aa17.98■□□□□ 0.47
CHD4-214ENST00000545942 SERPINE3A8MV23 424 aa17.98■□□□□ 0.47
CHD4-214ENST00000545942 C12orf77C9JDV5 145 aa17.98■□□□□ 0.47
CHD4-214ENST00000545942 CRTAPO75718 401 aaPredicted RBP17.98■□□□□ 0.47
CHD4-214ENST00000545942 MGMTP16455 207 aa17.98■□□□□ 0.47
CHD4-214ENST00000545942 C6orf183Q5T699 404 aa17.98■□□□□ 0.47
CHD4-214ENST00000545942 FAM53AQ6NSI3 398 aaPredicted RBP17.98■□□□□ 0.47
CHD4-214ENST00000545942 SLC35E3Q7Z769 313 aa17.98■□□□□ 0.47
CHD4-214ENST00000545942 GAPTQ8N292 157 aa17.98■□□□□ 0.47
CHD4-214ENST00000545942 NANOGP1Q8N7R0 232 aa17.98■□□□□ 0.47
CHD4-214ENST00000545942 OR4K15Q8NH41 348 aa17.98■□□□□ 0.47
CHD4-214ENST00000545942 EAF1Q96JC9 268 aaPredicted RBP17.98■□□□□ 0.47
CHD4-214ENST00000545942 NOL4LQ96MY1 436 aaPredicted RBP17.98■□□□□ 0.47
CHD4-214ENST00000545942 UQCC2Q9BRT2 126 aa17.98■□□□□ 0.47
CHD4-214ENST00000545942 GNG12Q9UBI6 72 aa17.98■□□□□ 0.47
CHD4-214ENST00000545942 PEX16Q9Y5Y5 336 aa17.98■□□□□ 0.47
CHD4-214ENST00000545942 CA11O75493 328 aa17.98■□□□□ 0.47
CHD4-214ENST00000545942 IGHG2P01859 326 aa17.98■□□□□ 0.47
CHD4-214ENST00000545942 TRAT1Q6PIZ9 186 aa17.98■□□□□ 0.47
CHD4-214ENST00000545942 TGIF2LXQ8IUE1 241 aa17.98■□□□□ 0.47
CHD4-214ENST00000545942 TMEM104Q8NE00 496 aa17.98■□□□□ 0.47
CHD4-214ENST00000545942 OR2T10Q8NGZ9 312 aa17.98■□□□□ 0.47
CHD4-214ENST00000545942 RTN4IP1Q8WWV3 396 aaPredicted RBP17.98■□□□□ 0.47
CHD4-214ENST00000545942 ST6GALNAC6Q969X2 333 aa17.98■□□□□ 0.47
CHD4-214ENST00000545942 RCC1LQ96I51 464 aaKnown RBP17.98■□□□□ 0.47
CHD4-214ENST00000545942 Q96M66 194 aa17.98■□□□□ 0.47
CHD4-214ENST00000545942 VCXQ9H320 206 aa17.98■□□□□ 0.47
CHD4-214ENST00000545942 NCBP2LA6PVI3 153 aaKnown RBP17.97■□□□□ 0.47
CHD4-214ENST00000545942 SC5DO75845 299 aa17.97■□□□□ 0.47
CHD4-214ENST00000545942 DUS4LO95620 317 aaKnown RBP17.97■□□□□ 0.47
CHD4-214ENST00000545942 HBZP02008 142 aa17.97■□□□□ 0.47
CHD4-214ENST00000545942 GLAP06280 429 aa17.97■□□□□ 0.47
CHD4-214ENST00000545942 FUT3P21217 361 aa17.97■□□□□ 0.47
CHD4-214ENST00000545942 CD1BP29016 333 aa17.97■□□□□ 0.47
CHD4-214ENST00000545942 SLC25A48Q6ZT89 311 aaKnown RBP17.97■□□□□ 0.47
CHD4-214ENST00000545942 FOXRED2Q8IWF2 684 aa17.97■□□□□ 0.47
CHD4-214ENST00000545942 PRR18Q8N4B5 295 aa17.97■□□□□ 0.47
CHD4-214ENST00000545942 Q8N6K4 173 aa17.97■□□□□ 0.47
CHD4-214ENST00000545942 ZNF439Q8NDP4 499 aa17.97■□□□□ 0.47
CHD4-214ENST00000545942 OR51D1Q8NGF3 324 aa17.97■□□□□ 0.47
CHD4-214ENST00000545942 FKBP14Q9NWM8 211 aa17.97■□□□□ 0.47
CHD4-214ENST00000545942 GHRLQ9UBU3 117 aa17.97■□□□□ 0.47
CHD4-214ENST00000545942 LINC00527Q9UJ94 153 aa17.97■□□□□ 0.47
CHD4-214ENST00000545942 SLC31A2O15432 143 aa17.96■□□□□ 0.46
CHD4-214ENST00000545942 TXNL1O43396 289 aa17.96■□□□□ 0.46
CHD4-214ENST00000545942 RPL23AP62750 156 aaKnown RBP17.96■□□□□ 0.46
CHD4-214ENST00000545942 SLC35B1P78383 322 aa17.96■□□□□ 0.46
CHD4-214ENST00000545942 GPR50Q13585 617 aa17.96■□□□□ 0.46
CHD4-214ENST00000545942 COMMD1Q8N668 190 aa17.96■□□□□ 0.46
CHD4-214ENST00000545942 LIN7CQ9NUP9 197 aaKnown RBP17.96■□□□□ 0.46
CHD4-214ENST00000545942 RCC1P18754 421 aaPredicted RBP17.95■□□□□ 0.46
CHD4-214ENST00000545942 VHLP40337 213 aa17.95■□□□□ 0.46
CHD4-214ENST00000545942 ZNF137PP52743 207 aa17.95■□□□□ 0.46
CHD4-214ENST00000545942 SIGIRRQ6IA17 410 aa17.95■□□□□ 0.46
CHD4-214ENST00000545942 STPG2Q8N412 459 aa17.95■□□□□ 0.46
CHD4-214ENST00000545942 LINC00482Q8N8I6 264 aa17.95■□□□□ 0.46
CHD4-214ENST00000545942 OR10V1Q8NGI7 309 aa17.95■□□□□ 0.46
CHD4-214ENST00000545942 OR1L1Q8NH94 360 aa17.95■□□□□ 0.46
CHD4-214ENST00000545942 TFAP2CQ92754 450 aa17.95■□□□□ 0.46
CHD4-214ENST00000545942 MND1Q9BWT6 205 aa17.95■□□□□ 0.46
CHD4-214ENST00000545942 CST11Q9H112 138 aa17.95■□□□□ 0.46
CHD4-214ENST00000545942 ABCG5Q9H222 651 aa17.95■□□□□ 0.46
CHD4-214ENST00000545942 ZFP57Q9NU63 452 aa17.95■□□□□ 0.46
CHD4-214ENST00000545942 UBE2QL1A1L167 161 aa17.94■□□□□ 0.46
CHD4-214ENST00000545942 PDCD6O75340 191 aa17.94■□□□□ 0.46
CHD4-214ENST00000545942 MOSP00540 346 aa17.94■□□□□ 0.46
CHD4-214ENST00000545942 SLC6A1P30531 599 aa17.94■□□□□ 0.46
CHD4-214ENST00000545942 ZNF134P52741 427 aa17.94■□□□□ 0.46
CHD4-214ENST00000545942 ACSM3Q53FZ2 586 aa17.94■□□□□ 0.46
CHD4-214ENST00000545942 CT45A1Q5HYN5 189 aa17.94■□□□□ 0.46
CHD4-214ENST00000545942 RNLSQ5VYX0 342 aa17.94■□□□□ 0.46
CHD4-214ENST00000545942 STEAP3Q658P3 488 aa17.94■□□□□ 0.46
CHD4-214ENST00000545942 OR2W3Q7Z3T1 314 aa17.94■□□□□ 0.46
CHD4-214ENST00000545942 MS4A15Q8N5U1 240 aa17.94■□□□□ 0.46
CHD4-214ENST00000545942 Q8N9W7 124 aa17.94■□□□□ 0.46
CHD4-214ENST00000545942 CT45A3Q8NHU0 189 aa17.94■□□□□ 0.46
CHD4-214ENST00000545942 FAM46BQ96A09 425 aa17.94■□□□□ 0.46
CHD4-214ENST00000545942 TAF9BQ9HBM6 251 aa17.94■□□□□ 0.46
CHD4-214ENST00000545942 MBNL3Q9NUK0 354 aaKnown RBP17.94■□□□□ 0.46
CHD4-214ENST00000545942 AP4M1O00189 453 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms