RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 FABP1P07148 127 aa13□□□□□ -0.33
CNN3-207ENST00000545882 PSG2P11465 335 aa13□□□□□ -0.33
CNN3-207ENST00000545882 TCEAL6Q6IPX3 200 aa13□□□□□ -0.33
CNN3-207ENST00000545882 ZNF343Q6P1L6 599 aa13□□□□□ -0.33
CNN3-207ENST00000545882 ZNF429Q86V71 674 aa13□□□□□ -0.33
CNN3-207ENST00000545882 TCEAL3Q969E4 200 aa13□□□□□ -0.33
CNN3-207ENST00000545882 FAM173AQ9BQD7 235 aa13□□□□□ -0.33
CNN3-207ENST00000545882 CABLES2Q9BTV7 478 aa13□□□□□ -0.33
CNN3-207ENST00000545882 SPRY4Q9C004 299 aa13□□□□□ -0.33
CNN3-207ENST00000545882 RIMS4Q9H426 269 aaPredicted RBP13□□□□□ -0.33
CNN3-207ENST00000545882 NIT2Q9NQR4 276 aa13□□□□□ -0.33
CNN3-207ENST00000545882 DLL3Q9NYJ7 618 aa13□□□□□ -0.33
CNN3-207ENST00000545882 FREM2Q5SZK8 3169 aa12.99□□□□□ -0.33
CNN3-207ENST00000545882 A0A087WWC5 75 aa12.99□□□□□ -0.33
CNN3-207ENST00000545882 H3BP45 60 aa12.99□□□□□ -0.33
CNN3-207ENST00000545882 IFNA17P01571 189 aa12.99□□□□□ -0.33
CNN3-207ENST00000545882 CXCL1P09341 107 aa12.99□□□□□ -0.33
CNN3-207ENST00000545882 TAGLN2P37802 199 aaKnown RBP12.99□□□□□ -0.33
CNN3-207ENST00000545882 EIF2S3P41091 472 aaKnown RBP12.99□□□□□ -0.33
CNN3-207ENST00000545882 WNT5AP41221 380 aa12.99□□□□□ -0.33
CNN3-207ENST00000545882 CEBPGP53567 150 aa12.99□□□□□ -0.33
CNN3-207ENST00000545882 HLA-DRB3P79483 266 aa12.99□□□□□ -0.33
CNN3-207ENST00000545882 DLK1P80370 383 aa12.99□□□□□ -0.33
CNN3-207ENST00000545882 ELOBQ15370 118 aa12.99□□□□□ -0.33
CNN3-207ENST00000545882 AKR1C8PQ5T2L2 129 aa12.99□□□□□ -0.33
CNN3-207ENST00000545882 LINC00596Q86U02 117 aa12.99□□□□□ -0.33
CNN3-207ENST00000545882 UNKLQ9H9P5 680 aaKnown RBP12.99□□□□□ -0.33
CNN3-207ENST00000545882 OR1A1Q9P1Q5 309 aa12.99□□□□□ -0.33
CNN3-207ENST00000545882 ERRFI1Q9UJM3 462 aaPredicted RBP12.99□□□□□ -0.33
CNN3-207ENST00000545882 WSB1Q9Y6I7 421 aa12.99□□□□□ -0.33
CNN3-207ENST00000545882 A0A1B0GU03 582 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 WRBO00258 174 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 RHBDL1O75783 438 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 WNT2P09544 360 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 SLC25A6P12236 298 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 UBE2KP61086 200 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 TMEM267Q0VDI3 215 aaPredicted RBP12.98□□□□□ -0.33
CNN3-207ENST00000545882 OR8G1Q15617 311 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 LPAL2Q16609 132 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 NCMAPQ5T1S8 102 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 DPPA3Q6W0C5 159 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 NUFIP2Q7Z417 695 aaKnown RBP12.98□□□□□ -0.33
CNN3-207ENST00000545882 THNSL2Q86YJ6 484 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 OR51H1Q8NH63 302 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 Q8WTZ3 238 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 HIST1H2AAQ96QV6 131 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 TCEAL7Q9BRU2 100 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 PLK3Q9H4B4 646 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 MMP24Q9Y5R2 645 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 MED13Q9UHV7 2174 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 TRAV1-1A0A0B4J248 108 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 LOC102723971A0A1B0GUV8 181 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 FAM166BA8MTA8 275 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 ARR3P36575 388 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 MAGEA5P43359 124 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 ARL16Q0P5N6 197 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 Q6P435 159 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 FAM58AQ8N1B3 248 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 OR10J5Q8NHC4 309 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 TCTEX1D2Q8WW35 142 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 RBMXL1Q96E39 390 aaKnown RBP12.98□□□□□ -0.33
CNN3-207ENST00000545882 TVP23CQ96ET8 276 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 ZPBPQ9BS86 351 aa12.98□□□□□ -0.33
CNN3-207ENST00000545882 TRAV39A0A0B4J263 110 aa12.97□□□□□ -0.33
CNN3-207ENST00000545882 SYNGR4O95473 234 aa12.97□□□□□ -0.33
CNN3-207ENST00000545882 RPS10P46783 165 aaKnown RBP12.97□□□□□ -0.33
CNN3-207ENST00000545882 ERVFRD-1P60508 538 aa12.97□□□□□ -0.33
CNN3-207ENST00000545882 TLE4Q04727 773 aa12.97□□□□□ -0.33
CNN3-207ENST00000545882 KHDC3LQ587J8 217 aa12.97□□□□□ -0.33
CNN3-207ENST00000545882 HAPLN4Q86UW8 402 aa12.97□□□□□ -0.33
CNN3-207ENST00000545882 APH1AQ96BI3 265 aa12.97□□□□□ -0.33
CNN3-207ENST00000545882 VSIRQ9H7M9 311 aa12.97□□□□□ -0.33
CNN3-207ENST00000545882 ZDBF2Q9HCK1 2354 aa12.96□□□□□ -0.33
CNN3-207ENST00000545882 WDFY4Q6ZS81 3184 aa12.96□□□□□ -0.33
CNN3-207ENST00000545882 IFITM10A6NMD0 228 aa12.96□□□□□ -0.33
CNN3-207ENST00000545882 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.96□□□□□ -0.33
CNN3-207ENST00000545882 DFFBO76075 338 aa12.96□□□□□ -0.33
CNN3-207ENST00000545882 IGKV1-5P01602 117 aa12.96□□□□□ -0.33
CNN3-207ENST00000545882 HOXA5P20719 270 aa12.96□□□□□ -0.33
CNN3-207ENST00000545882 MPLP40238 635 aa12.96□□□□□ -0.33
CNN3-207ENST00000545882 RPL23AP62750 156 aaKnown RBP12.96□□□□□ -0.33
CNN3-207ENST00000545882 TESK1Q15569 626 aa12.96□□□□□ -0.33
CNN3-207ENST00000545882 P4HA3Q7Z4N8 544 aa12.96□□□□□ -0.33
CNN3-207ENST00000545882 OR10V1Q8NGI7 309 aa12.96□□□□□ -0.33
CNN3-207ENST00000545882 RAB40CQ96S21 281 aa12.96□□□□□ -0.33
CNN3-207ENST00000545882 RSG1Q9BU20 258 aa12.96□□□□□ -0.33
CNN3-207ENST00000545882 TTTY12Q9BZ98 90 aa12.96□□□□□ -0.33
CNN3-207ENST00000545882 OR51M1Q9H341 326 aa12.96□□□□□ -0.33
CNN3-207ENST00000545882 OR51I2Q9H344 312 aa12.96□□□□□ -0.33
CNN3-207ENST00000545882 MPC1Q9Y5U8 109 aa12.96□□□□□ -0.33
CNN3-207ENST00000545882 OR5B21A6NL26 309 aa12.96□□□□□ -0.34
CNN3-207ENST00000545882 ANKRD30BLA7E2S9 258 aa12.96□□□□□ -0.34
CNN3-207ENST00000545882 NPIPB11E5RHQ5 1161 aa12.96□□□□□ -0.34
CNN3-207ENST00000545882 YIF1AO95070 293 aa12.96□□□□□ -0.34
CNN3-207ENST00000545882 HBE1P02100 147 aa12.96□□□□□ -0.34
CNN3-207ENST00000545882 GNG3P63215 75 aa12.96□□□□□ -0.34
CNN3-207ENST00000545882 KIAA0141Q14154 515 aaPredicted RBP12.96□□□□□ -0.34
CNN3-207ENST00000545882 ZNF726P1Q15940 193 aa12.96□□□□□ -0.34
CNN3-207ENST00000545882 C3AR1Q16581 482 aa12.96□□□□□ -0.34
CNN3-207ENST00000545882 SSX7Q7RTT5 188 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms