RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 IGHV2-70DA0A0C4DH43 119 aa13.21□□□□□ -0.29
PRPF40A-212ENST00000545856 C15orf65H3BRN8 121 aa13.21□□□□□ -0.29
PRPF40A-212ENST00000545856 ITGB1BP1O14713 200 aa13.21□□□□□ -0.29
PRPF40A-212ENST00000545856 RGS11O94810 467 aa13.21□□□□□ -0.29
PRPF40A-212ENST00000545856 PPIAL4GP0DN37 164 aa13.21□□□□□ -0.29
PRPF40A-212ENST00000545856 RCC1P18754 421 aaPredicted RBP13.21□□□□□ -0.29
PRPF40A-212ENST00000545856 FPR2P25090 351 aa13.21□□□□□ -0.29
PRPF40A-212ENST00000545856 IL2RGP31785 369 aa13.21□□□□□ -0.29
PRPF40A-212ENST00000545856 ECI1P42126 302 aa13.21□□□□□ -0.29
PRPF40A-212ENST00000545856 OR3A3P47888 321 aa13.21□□□□□ -0.29
PRPF40A-212ENST00000545856 GZMKP49863 264 aa13.21□□□□□ -0.29
PRPF40A-212ENST00000545856 CDK10Q15131 360 aa13.21□□□□□ -0.29
PRPF40A-212ENST00000545856 TMEM200BQ69YZ2 307 aa13.21□□□□□ -0.29
PRPF40A-212ENST00000545856 STEAP1BQ6NZ63 245 aa13.21□□□□□ -0.29
PRPF40A-212ENST00000545856 OVCH2Q7RTZ1 564 aa13.21□□□□□ -0.29
PRPF40A-212ENST00000545856 FAM185AQ8N0U4 392 aa13.21□□□□□ -0.29
PRPF40A-212ENST00000545856 SLC2A8Q9NY64 477 aa13.21□□□□□ -0.29
PRPF40A-212ENST00000545856 CSMD1Q96PZ7 3565 aa13.21□□□□□ -0.29
PRPF40A-212ENST00000545856 TRBV6-7A0A0A0MS04 114 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 C17orf98A8MV24 154 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 J3QRK9 145 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 ZBTB25P24278 435 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 SEC61A1P61619 476 aaKnown RBP13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 PAX2Q02962 417 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 MADCAM1Q13477 382 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 ASAH1Q13510 395 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 ZNF57Q68EA5 555 aaPredicted RBP13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 TCF23Q7RTU1 214 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 GVQW1Q8N7I0 195 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 C8orf31Q8N9H6 132 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 LINC01356Q8N9X3 169 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 MRGPRDQ8TDS7 321 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 ARL11Q969Q4 196 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 PRRT1Q99946 306 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 GHITMQ9H3K2 345 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 ZNF230Q9UIE0 474 aaPredicted RBP13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 VPS13CQ709C8 3753 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 A0A087X0M5 115 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 A0A1B0GX30 115 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 DISC1C4P0D8 188 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 RAB3DO95716 219 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 HBZP02008 142 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 IFNA6P05013 189 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 MSMBP08118 114 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 DLX6P56179 175 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 Q6ZPA2 131 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 LYSMD2Q8IV50 215 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 TPRX1Q8N7U7 411 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 CCDC107Q8WV48 283 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 EDARADDQ8WWZ3 215 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 TNFRSF14Q92956 283 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 ABCB10Q9NRK6 738 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 COPZ2Q9P299 210 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 SCP2D1Q9UJQ7 156 aa13.2□□□□□ -0.3
PRPF40A-212ENST00000545856 MEIS3P1A6NDR6 274 aa13.19□□□□□ -0.3
PRPF40A-212ENST00000545856 C22orf46C9J442 243 aa13.19□□□□□ -0.3
PRPF40A-212ENST00000545856 J3QLI3 93 aa13.19□□□□□ -0.3
PRPF40A-212ENST00000545856 PHF1O43189 567 aaPredicted RBP13.19□□□□□ -0.3
PRPF40A-212ENST00000545856 LANCL1O43813 399 aa13.19□□□□□ -0.3
PRPF40A-212ENST00000545856 YPEL1O60688 119 aa13.19□□□□□ -0.3
PRPF40A-212ENST00000545856 CD3DP04234 171 aa13.19□□□□□ -0.3
PRPF40A-212ENST00000545856 OR5H8P0DN80 308 aa13.19□□□□□ -0.3
PRPF40A-212ENST00000545856 HRH1P35367 487 aa13.19□□□□□ -0.3
PRPF40A-212ENST00000545856 ERVFRD-1P60508 538 aa13.19□□□□□ -0.3
PRPF40A-212ENST00000545856 ZNF273Q14593 569 aa13.19□□□□□ -0.3
PRPF40A-212ENST00000545856 C17orf58Q2M2W7 97 aa13.19□□□□□ -0.3
PRPF40A-212ENST00000545856 MZT2BQ6NZ67 158 aa13.19□□□□□ -0.3
PRPF40A-212ENST00000545856 OR10J5Q8NHC4 309 aa13.19□□□□□ -0.3
PRPF40A-212ENST00000545856 GIMAP1Q8WWP7 306 aa13.19□□□□□ -0.3
PRPF40A-212ENST00000545856 YPEL2Q96QA6 119 aa13.19□□□□□ -0.3
PRPF40A-212ENST00000545856 METTL8Q9H825 291 aaKnown RBP13.19□□□□□ -0.3
PRPF40A-212ENST00000545856 ING3Q9NXR8 418 aa13.19□□□□□ -0.3
PRPF40A-212ENST00000545856 IDI2-AS1Q9NZ38 188 aa13.19□□□□□ -0.3
PRPF40A-212ENST00000545856 FAM157AC9JC47 383 aa13.18□□□□□ -0.3
PRPF40A-212ENST00000545856 GSTT2P0CG29 244 aa13.18□□□□□ -0.3
PRPF40A-212ENST00000545856 ZFP36P26651 326 aaKnown RBP13.18□□□□□ -0.3
PRPF40A-212ENST00000545856 HLA-DMAP28067 261 aa13.18□□□□□ -0.3
PRPF40A-212ENST00000545856 CD34P28906 385 aa13.18□□□□□ -0.3
PRPF40A-212ENST00000545856 SSTR5P35346 364 aa13.18□□□□□ -0.3
PRPF40A-212ENST00000545856 DVL1P1P54792 670 aaPredicted RBP13.18□□□□□ -0.3
PRPF40A-212ENST00000545856 MSMO1Q15800 293 aa13.18□□□□□ -0.3
PRPF40A-212ENST00000545856 RNASE12Q5GAN4 147 aaKnown RBP13.18□□□□□ -0.3
PRPF40A-212ENST00000545856 NCR3LG1Q68D85 454 aa13.18□□□□□ -0.3
PRPF40A-212ENST00000545856 DHRS11Q6UWP2 260 aa13.18□□□□□ -0.3
PRPF40A-212ENST00000545856 TEX29Q8N6K0 151 aa13.18□□□□□ -0.3
PRPF40A-212ENST00000545856 KIRREL1Q96J84 757 aa13.18□□□□□ -0.3
PRPF40A-212ENST00000545856 GINS4Q9BRT9 223 aa13.18□□□□□ -0.3
PRPF40A-212ENST00000545856 EHFQ9NZC4 300 aa13.18□□□□□ -0.3
PRPF40A-212ENST00000545856 SESN1Q9Y6P5 492 aa13.18□□□□□ -0.3
PRPF40A-212ENST00000545856 IGKV1D-8A0A087WSZ0 117 aa13.17□□□□□ -0.3
PRPF40A-212ENST00000545856 RNF223E7ERA6 249 aa13.17□□□□□ -0.3
PRPF40A-212ENST00000545856 HSPA12AO43301 675 aa13.17□□□□□ -0.3
PRPF40A-212ENST00000545856 LYRM1O43325 122 aa13.17□□□□□ -0.3
PRPF40A-212ENST00000545856 TUSC2O75896 110 aa13.17□□□□□ -0.3
PRPF40A-212ENST00000545856 SLC22A5O76082 557 aa13.17□□□□□ -0.3
PRPF40A-212ENST00000545856 FCER2P06734 321 aa13.17□□□□□ -0.3
PRPF40A-212ENST00000545856 SCTP09683 121 aa13.17□□□□□ -0.3
PRPF40A-212ENST00000545856 IGHV1-8P0DP01 117 aa13.17□□□□□ -0.3
PRPF40A-212ENST00000545856 PRTN3P24158 256 aa13.17□□□□□ -0.3
PRPF40A-212ENST00000545856 HERPUD1Q15011 391 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms