RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 IGKV1-39P01597 117 aa13.44□□□□□ -0.26
LDLR-204ENST00000545707 IGKV1D-39P04432 117 aa13.44□□□□□ -0.26
LDLR-204ENST00000545707 ZNF16P17020 682 aaPredicted RBP13.44□□□□□ -0.26
LDLR-204ENST00000545707 RPL23AP62750 156 aaKnown RBP13.44□□□□□ -0.26
LDLR-204ENST00000545707 S100A12P80511 92 aa13.44□□□□□ -0.26
LDLR-204ENST00000545707 HNF4GQ14541 408 aa13.44□□□□□ -0.26
LDLR-204ENST00000545707 ATP5SQ99766 215 aa13.44□□□□□ -0.26
LDLR-204ENST00000545707 LINC00470Q9BZP3 86 aa13.44□□□□□ -0.26
LDLR-204ENST00000545707 BCL2L14Q9BZR8 327 aa13.44□□□□□ -0.26
LDLR-204ENST00000545707 PRSS50Q9UI38 385 aa13.44□□□□□ -0.26
LDLR-204ENST00000545707 MRPS18CQ9Y3D5 142 aaKnown RBP13.44□□□□□ -0.26
LDLR-204ENST00000545707 NCOR1O75376 2440 aa13.44□□□□□ -0.26
LDLR-204ENST00000545707 TNRC6BQ9UPQ9 1833 aaKnown RBP13.44□□□□□ -0.26
LDLR-204ENST00000545707 B4E171 279 aa13.44□□□□□ -0.26
LDLR-204ENST00000545707 SYNGR4O95473 234 aa13.44□□□□□ -0.26
LDLR-204ENST00000545707 TSPAN7P41732 249 aa13.44□□□□□ -0.26
LDLR-204ENST00000545707 SRSF7Q16629 238 aaKnown RBP eCLIP13.44□□□□□ -0.26
LDLR-204ENST00000545707 NRN1LQ496H8 165 aa13.44□□□□□ -0.26
LDLR-204ENST00000545707 SP5Q6BEB4 398 aaPredicted RBP13.44□□□□□ -0.26
LDLR-204ENST00000545707 FAM180AQ6UWF9 173 aa13.44□□□□□ -0.26
LDLR-204ENST00000545707 FAM58AQ8N1B3 248 aa13.44□□□□□ -0.26
LDLR-204ENST00000545707 CLDND2Q8NHS1 167 aa13.44□□□□□ -0.26
LDLR-204ENST00000545707 Q8WTZ3 238 aa13.44□□□□□ -0.26
LDLR-204ENST00000545707 APH1AQ96BI3 265 aa13.44□□□□□ -0.26
LDLR-204ENST00000545707 GNPNAT1Q96EK6 184 aaPredicted RBP13.44□□□□□ -0.26
LDLR-204ENST00000545707 DLL3Q9NYJ7 618 aa13.44□□□□□ -0.26
LDLR-204ENST00000545707 GNG13Q9P2W3 67 aa13.44□□□□□ -0.26
LDLR-204ENST00000545707 LOC400499M0QZD8 3231 aa13.44□□□□□ -0.26
LDLR-204ENST00000545707 ASPMQ8IZT6 3477 aa13.44□□□□□ -0.26
LDLR-204ENST00000545707 KIAA1324LA8MWY0 1029 aaPredicted RBP13.43□□□□□ -0.26
LDLR-204ENST00000545707 LAMTOR5O43504 91 aa13.43□□□□□ -0.26
LDLR-204ENST00000545707 TAS2R30P59541 319 aa13.43□□□□□ -0.26
LDLR-204ENST00000545707 ERVFRD-1P60508 538 aa13.43□□□□□ -0.26
LDLR-204ENST00000545707 ARL16Q0P5N6 197 aa13.43□□□□□ -0.26
LDLR-204ENST00000545707 KIAA0141Q14154 515 aaPredicted RBP13.43□□□□□ -0.26
LDLR-204ENST00000545707 MALSU1Q96EH3 234 aa13.43□□□□□ -0.26
LDLR-204ENST00000545707 FAM173AQ9BQD7 235 aa13.43□□□□□ -0.26
LDLR-204ENST00000545707 ZNF251Q9BRH9 671 aa13.43□□□□□ -0.26
LDLR-204ENST00000545707 TTTY12Q9BZ98 90 aa13.43□□□□□ -0.26
LDLR-204ENST00000545707 CACNG5Q9UF02 275 aa13.43□□□□□ -0.26
LDLR-204ENST00000545707 MIOXQ9UGB7 285 aa13.43□□□□□ -0.26
LDLR-204ENST00000545707 DSPP15924 2871 aaKnown RBP13.43□□□□□ -0.26
LDLR-204ENST00000545707 IFNA17P01571 189 aa13.43□□□□□ -0.26
LDLR-204ENST00000545707 CTXN2P0C2S0 81 aa13.43□□□□□ -0.26
LDLR-204ENST00000545707 METTL15P1P0C7V9 234 aa13.43□□□□□ -0.26
LDLR-204ENST00000545707 HOXB1P14653 301 aaPredicted RBP13.43□□□□□ -0.26
LDLR-204ENST00000545707 HOXA6P31267 233 aa13.43□□□□□ -0.26
LDLR-204ENST00000545707 FGF8P55075 233 aaPredicted RBP13.43□□□□□ -0.26
LDLR-204ENST00000545707 BAXQ07812 192 aa13.43□□□□□ -0.26
LDLR-204ENST00000545707 ABHD17BQ5VST6 288 aa13.43□□□□□ -0.26
LDLR-204ENST00000545707 LCN15Q6UWW0 184 aa13.43□□□□□ -0.26
LDLR-204ENST00000545707 STX12Q86Y82 276 aa13.43□□□□□ -0.26
LDLR-204ENST00000545707 OR1K1Q8NGR3 316 aa13.43□□□□□ -0.26
LDLR-204ENST00000545707 KNTC1P50748 2209 aa13.43□□□□□ -0.26
LDLR-204ENST00000545707 TGIF2-C20orf24A0A0A6YYL0 155 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 ZFP92A6NM28 416 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 ANKRD30BLA7E2S9 258 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 SIRPB1O00241 398 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 SS18L1O75177 396 aaPredicted RBP13.42□□□□□ -0.26
LDLR-204ENST00000545707 CNOT4O95628 575 aaKnown RBP13.42□□□□□ -0.26
LDLR-204ENST00000545707 IGLV2-14P01704 120 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 IL24Q13007 206 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 ESPL1Q14674 2120 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 ELOBQ15370 118 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 OR1C1Q15619 314 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 TMEM251Q8N6I4 163 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 RPRMQ9NS64 109 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 FOXJ2Q9P0K8 574 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 DUXBA0A1W2PPF3 345 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 A0A1W2PR80 420 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 DEGS1O15121 323 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 PPIHO43447 177 aaKnown RBP13.42□□□□□ -0.26
LDLR-204ENST00000545707 RD3LP0DJH9 198 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 SELEP16581 610 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 EIF2S3P41091 472 aaKnown RBP13.42□□□□□ -0.26
LDLR-204ENST00000545707 HLA-DRB3P79483 266 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 TLE4Q04727 773 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 PLP2Q04941 152 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 ZNF674Q2M3X9 581 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 ZNF506Q5JVG8 444 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 SSX7Q7RTT5 188 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 H1FOOQ8IZA3 346 aaPredicted RBP13.42□□□□□ -0.26
LDLR-204ENST00000545707 TCTEX1D2Q8WW35 142 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 POM121Q96HA1 1249 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 ABHD14BQ96IU4 210 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 SMDT1Q9H4I9 107 aa13.42□□□□□ -0.26
LDLR-204ENST00000545707 RBM7Q9Y580 266 aaKnown RBP13.42□□□□□ -0.26
LDLR-204ENST00000545707 DIDO1Q9BTC0 2240 aaKnown RBP13.42□□□□□ -0.26
LDLR-204ENST00000545707 BTBD17A6NE02 478 aa13.41□□□□□ -0.26
LDLR-204ENST00000545707 C9orf172C9J069 976 aa13.41□□□□□ -0.26
LDLR-204ENST00000545707 NDUFA6P56556 154 aa13.41□□□□□ -0.26
LDLR-204ENST00000545707 HOXA4Q00056 320 aaPredicted RBP13.41□□□□□ -0.26
LDLR-204ENST00000545707 PLGLB1Q02325 96 aa13.41□□□□□ -0.26
LDLR-204ENST00000545707 TLE1Q04724 770 aa13.41□□□□□ -0.26
LDLR-204ENST00000545707 OR10V1Q8NGI7 309 aa13.41□□□□□ -0.26
LDLR-204ENST00000545707 NIPSNAP3BQ9BS92 247 aa13.41□□□□□ -0.26
LDLR-204ENST00000545707 ZNF665Q9H7R5 613 aa13.41□□□□□ -0.26
LDLR-204ENST00000545707 MED13Q9UHV7 2174 aa13.41□□□□□ -0.26
LDLR-204ENST00000545707 TRAV20A0A0B4J274 112 aa13.41□□□□□ -0.26
LDLR-204ENST00000545707 WDR1O75083 606 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms