RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 SERPINE3A8MV23 424 aa15.77■□□□□ 0.12
CHD4-213ENST00000545584 FAM90A23PA8MXZ1 464 aa15.77■□□□□ 0.12
CHD4-213ENST00000545584 CASQ2O14958 399 aaPredicted RBP15.77■□□□□ 0.12
CHD4-213ENST00000545584 CRTAPO75718 401 aaPredicted RBP15.77■□□□□ 0.12
CHD4-213ENST00000545584 IGHV3-43DP0DP04 118 aa15.77■□□□□ 0.12
CHD4-213ENST00000545584 MGMTP16455 207 aa15.77■□□□□ 0.12
CHD4-213ENST00000545584 REG1BP48304 166 aa15.77■□□□□ 0.12
CHD4-213ENST00000545584 LOXL3P58215 753 aa15.77■□□□□ 0.12
CHD4-213ENST00000545584 TMEM30BQ3MIR4 351 aa15.77■□□□□ 0.12
CHD4-213ENST00000545584 SYT6Q5T7P8 510 aaPredicted RBP15.77■□□□□ 0.12
CHD4-213ENST00000545584 LAIR2Q6ISS4 152 aa15.77■□□□□ 0.12
CHD4-213ENST00000545584 TRAT1Q6PIZ9 186 aa15.77■□□□□ 0.12
CHD4-213ENST00000545584 C10orf99Q6UWK7 81 aa15.77■□□□□ 0.12
CHD4-213ENST00000545584 NANOGP1Q8N7R0 232 aa15.77■□□□□ 0.12
CHD4-213ENST00000545584 FBLIM1Q8WUP2 373 aa15.77■□□□□ 0.12
CHD4-213ENST00000545584 UQCC2Q9BRT2 126 aa15.77■□□□□ 0.12
CHD4-213ENST00000545584 BANF2Q9H503 90 aa15.77■□□□□ 0.12
CHD4-213ENST00000545584 GNG12Q9UBI6 72 aa15.77■□□□□ 0.12
CHD4-213ENST00000545584 ANKRD65E5RJM6 399 aa15.76■□□□□ 0.11
CHD4-213ENST00000545584 PIN1P1O15428 100 aa15.76■□□□□ 0.11
CHD4-213ENST00000545584 CA11O75493 328 aa15.76■□□□□ 0.11
CHD4-213ENST00000545584 IGLL1P15814 213 aa15.76■□□□□ 0.11
CHD4-213ENST00000545584 FUT3P21217 361 aa15.76■□□□□ 0.11
CHD4-213ENST00000545584 SLC35A2P78381 396 aa15.76■□□□□ 0.11
CHD4-213ENST00000545584 SLC35B1P78383 322 aa15.76■□□□□ 0.11
CHD4-213ENST00000545584 SLC35E3Q7Z769 313 aa15.76■□□□□ 0.11
CHD4-213ENST00000545584 ZNF329Q86UD4 541 aa15.76■□□□□ 0.11
CHD4-213ENST00000545584 FOXRED2Q8IWF2 684 aa15.76■□□□□ 0.11
CHD4-213ENST00000545584 OR2T10Q8NGZ9 312 aa15.76■□□□□ 0.11
CHD4-213ENST00000545584 OR4K15Q8NH41 348 aa15.76■□□□□ 0.11
CHD4-213ENST00000545584 MRAPQ8TCY5 172 aa15.76■□□□□ 0.11
CHD4-213ENST00000545584 GHRLQ9UBU3 117 aa15.76■□□□□ 0.11
CHD4-213ENST00000545584 IGHV3-72A0A0B4J1Y9 119 aa15.75■□□□□ 0.11
CHD4-213ENST00000545584 NCBP2LA6PVI3 153 aaKnown RBP15.75■□□□□ 0.11
CHD4-213ENST00000545584 C12orf77C9JDV5 145 aa15.75■□□□□ 0.11
CHD4-213ENST00000545584 GLAP06280 429 aa15.75■□□□□ 0.11
CHD4-213ENST00000545584 EBI3Q14213 229 aa15.75■□□□□ 0.11
CHD4-213ENST00000545584 IZUMO1Q8IYV9 350 aa15.75■□□□□ 0.11
CHD4-213ENST00000545584 PRR18Q8N4B5 295 aa15.75■□□□□ 0.11
CHD4-213ENST00000545584 MS4A15Q8N5U1 240 aa15.75■□□□□ 0.11
CHD4-213ENST00000545584 OR51D1Q8NGF3 324 aa15.75■□□□□ 0.11
CHD4-213ENST00000545584 EAF1Q96JC9 268 aaPredicted RBP15.75■□□□□ 0.11
CHD4-213ENST00000545584 MND1Q9BWT6 205 aa15.75■□□□□ 0.11
CHD4-213ENST00000545584 CST11Q9H112 138 aa15.75■□□□□ 0.11
CHD4-213ENST00000545584 PRKDCP78527 4128 aaKnown RBP15.74■□□□□ 0.11
CHD4-213ENST00000545584 TXNL1O43396 289 aa15.74■□□□□ 0.11
CHD4-213ENST00000545584 IGHG2P01859 326 aa15.74■□□□□ 0.11
CHD4-213ENST00000545584 CD1BP29016 333 aa15.74■□□□□ 0.11
CHD4-213ENST00000545584 GPR50Q13585 617 aa15.74■□□□□ 0.11
CHD4-213ENST00000545584 FOXB2Q5VYV0 432 aa15.74■□□□□ 0.11
CHD4-213ENST00000545584 Q6ZPA2 131 aa15.74■□□□□ 0.11
CHD4-213ENST00000545584 TMEM104Q8NE00 496 aa15.74■□□□□ 0.11
CHD4-213ENST00000545584 RTN4IP1Q8WWV3 396 aaPredicted RBP15.74■□□□□ 0.11
CHD4-213ENST00000545584 RCC1LQ96I51 464 aaKnown RBP15.74■□□□□ 0.11
CHD4-213ENST00000545584 Q96M66 194 aa15.74■□□□□ 0.11
CHD4-213ENST00000545584 NOL4LQ96MY1 436 aaPredicted RBP15.74■□□□□ 0.11
CHD4-213ENST00000545584 FKBP14Q9NWM8 211 aa15.74■□□□□ 0.11
CHD4-213ENST00000545584 KCNIP1Q9NZI2 227 aa15.74■□□□□ 0.11
CHD4-213ENST00000545584 UBE2QL1A1L167 161 aa15.73■□□□□ 0.11
CHD4-213ENST00000545584 DUS4LO95620 317 aaKnown RBP15.73■□□□□ 0.11
CHD4-213ENST00000545584 HBZP02008 142 aa15.73■□□□□ 0.11
CHD4-213ENST00000545584 CDK1P06493 297 aa15.73■□□□□ 0.11
CHD4-213ENST00000545584 UBBP0CG47 229 aa15.73■□□□□ 0.11
CHD4-213ENST00000545584 GABPB1Q06547 395 aaPredicted RBP15.73■□□□□ 0.11
CHD4-213ENST00000545584 ACSM3Q53FZ2 586 aa15.73■□□□□ 0.11
CHD4-213ENST00000545584 SLC25A48Q6ZT89 311 aaKnown RBP15.73■□□□□ 0.11
CHD4-213ENST00000545584 LYPD6Q86Y78 171 aa15.73■□□□□ 0.11
CHD4-213ENST00000545584 TGIF2LXQ8IUE1 241 aa15.73■□□□□ 0.11
CHD4-213ENST00000545584 GAPTQ8N292 157 aa15.73■□□□□ 0.11
CHD4-213ENST00000545584 COMMD1Q8N668 190 aa15.73■□□□□ 0.11
CHD4-213ENST00000545584 OR10V1Q8NGI7 309 aa15.73■□□□□ 0.11
CHD4-213ENST00000545584 TFAP2CQ92754 450 aa15.73■□□□□ 0.11
CHD4-213ENST00000545584 ST6GALNAC6Q969X2 333 aa15.73■□□□□ 0.11
CHD4-213ENST00000545584 FAM46BQ96A09 425 aa15.73■□□□□ 0.11
CHD4-213ENST00000545584 ZFP57Q9NU63 452 aa15.73■□□□□ 0.11
CHD4-213ENST00000545584 LIN7CQ9NUP9 197 aaKnown RBP15.73■□□□□ 0.11
CHD4-213ENST00000545584 AURKAIP1Q9NWT8 199 aaPredicted RBP15.73■□□□□ 0.11
CHD4-213ENST00000545584 SCN3BQ9NY72 215 aa15.73■□□□□ 0.11
CHD4-213ENST00000545584 PTGES3LE9PB15 166 aa15.72■□□□□ 0.11
CHD4-213ENST00000545584 PDCD6O75340 191 aa15.72■□□□□ 0.11
CHD4-213ENST00000545584 SC5DO75845 299 aa15.72■□□□□ 0.11
CHD4-213ENST00000545584 MOSP00540 346 aa15.72■□□□□ 0.11
CHD4-213ENST00000545584 VHLP40337 213 aa15.72■□□□□ 0.11
CHD4-213ENST00000545584 RPL23AP62750 156 aaKnown RBP15.72■□□□□ 0.11
CHD4-213ENST00000545584 RNLSQ5VYX0 342 aa15.72■□□□□ 0.11
CHD4-213ENST00000545584 STEAP3Q658P3 488 aa15.72■□□□□ 0.11
CHD4-213ENST00000545584 GLT8D1Q68CQ7 371 aa15.72■□□□□ 0.11
CHD4-213ENST00000545584 FAM53AQ6NSI3 398 aaPredicted RBP15.72■□□□□ 0.11
CHD4-213ENST00000545584 OR1L1Q8NH94 360 aa15.72■□□□□ 0.11
CHD4-213ENST00000545584 GON7Q9BXV9 100 aa15.72■□□□□ 0.11
CHD4-213ENST00000545584 DCLRE1BQ9H816 532 aa15.72■□□□□ 0.11
CHD4-213ENST00000545584 TAF9BQ9HBM6 251 aa15.72■□□□□ 0.11
CHD4-213ENST00000545584 OR2S2Q9NQN1 319 aa15.72■□□□□ 0.11
CHD4-213ENST00000545584 LINC00527Q9UJ94 153 aa15.72■□□□□ 0.11
CHD4-213ENST00000545584 NUDT19A8MXV4 375 aa15.71■□□□□ 0.11
CHD4-213ENST00000545584 H0YHG0 523 aa15.71■□□□□ 0.11
CHD4-213ENST00000545584 AP4M1O00189 453 aa15.71■□□□□ 0.11
CHD4-213ENST00000545584 SLC31A2O15432 143 aa15.71■□□□□ 0.11
CHD4-213ENST00000545584 MPIG6BO95866 241 aa15.71■□□□□ 0.11
CHD4-213ENST00000545584 RCC1P18754 421 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms