RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 AQP10Q96PS8 301 aa9.14□□□□□ -0.95
PCDH9-204ENST00000544246 ALKBH7Q9BT30 221 aaPredicted RBP9.14□□□□□ -0.95
PCDH9-204ENST00000544246 BEX4Q9NWD9 120 aaPredicted RBP9.14□□□□□ -0.95
PCDH9-204ENST00000544246 RCC2Q9P258 522 aaKnown RBP9.14□□□□□ -0.95
PCDH9-204ENST00000544246 PITX3O75364 302 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 ZFPL1O95159 310 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 IL4P05112 153 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 GABRG2P18507 467 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 FAM169BQ8N8A8 192 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 ABHD14BQ96IU4 210 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 CCL28Q9NRJ3 127 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 ASB1Q9Y576 335 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 SRD5A2P31213 254 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 MMDQ15546 238 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 ACER2Q5QJU3 275 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 RGP1Q92546 391 aaPredicted RBP9.13□□□□□ -0.95
PCDH9-204ENST00000544246 TAF1LQ8IZX4 1826 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 TRAV8-7A0A075B6U6 113 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 CTDSPLO15194 276 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 AMY1AP04745 511 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 MFAP2P55001 183 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 C10orf35Q96D05 121 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 PMCHL2Q9BQD1 86 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 CRHP06850 196 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 CTGFP29279 349 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 C2orf83Q53S99 150 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 SPEM1Q8N4L4 309 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 OR10S1Q8NGN2 331 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 TMEM174Q8WUU8 243 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 EAF1Q96JC9 268 aaPredicted RBP9.13□□□□□ -0.95
PCDH9-204ENST00000544246 MS4A7Q9GZW8 240 aaPredicted RBP9.13□□□□□ -0.95
PCDH9-204ENST00000544246 AURKAIP1Q9NWT8 199 aaPredicted RBP9.13□□□□□ -0.95
PCDH9-204ENST00000544246 MT-ND6P03923 174 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 PCMT1P22061 227 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 ERVFRD-1P60508 538 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 PDFQ9HBH1 243 aa9.13□□□□□ -0.95
PCDH9-204ENST00000544246 COL5A3P25940 1745 aaPredicted RBP9.13□□□□□ -0.95
PCDH9-204ENST00000544246 PDE4DIPQ5VU43 2346 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 MYH11P35749 1972 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 TMEM210A6NLX4 147 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 NKX2-2O95096 273 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 INSL4Q14641 139 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 HES3Q5TGS1 186 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 RND1Q92730 232 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 GEMIN7Q9H840 131 aaKnown RBP9.12□□□□□ -0.95
PCDH9-204ENST00000544246 HSPB7Q9UBY9 170 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 IGKV3OR2-268A0A0C4DH90 116 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 ZBTB42B2RXF5 422 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 J3QR06 171 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 TMEM50BP56557 158 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 RAC3P60763 192 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 RPS20P60866 119 aaKnown RBP9.12□□□□□ -0.95
PCDH9-204ENST00000544246 MRGPRFQ96AM1 343 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 F11RQ9Y624 299 aaKnown RBP9.12□□□□□ -0.95
PCDH9-204ENST00000544246 LMO7DNF2Z398 122 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 HMGA1P17096 107 aaKnown RBP9.12□□□□□ -0.95
PCDH9-204ENST00000544246 MEF2CQ06413 473 aaPredicted RBP9.12□□□□□ -0.95
PCDH9-204ENST00000544246 NSUN5P2Q63ZY6 315 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 FAM109BQ6ICB4 259 aaPredicted RBP9.12□□□□□ -0.95
PCDH9-204ENST00000544246 MRPL24Q96A35 216 aaKnown RBP9.12□□□□□ -0.95
PCDH9-204ENST00000544246 SCNM1Q9BWG6 230 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 UQCR10Q9UDW1 63 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 A0A1B0GV72 72 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 NKX2-6A6NCS4 301 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 NPFFO15130 113 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 STPG3Q8N7X2 389 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 OR8G5Q8NG78 346 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 HDHD3Q9BSH5 251 aaPredicted RBP9.12□□□□□ -0.95
PCDH9-204ENST00000544246 SLIRPQ9GZT3 109 aaKnown RBP9.12□□□□□ -0.95
PCDH9-204ENST00000544246 FAM206AQ9NX38 181 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 METTL12A8MUP2 240 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 PPYP01298 95 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 MVDP53602 400 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 SLC25A34Q6PIV7 304 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 GALNT14Q96FL9 552 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 SFRP2Q96HF1 295 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 PHLDA3Q9Y5J5 127 aa9.12□□□□□ -0.95
PCDH9-204ENST00000544246 A0A1B0GTH9 108 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 SLC25A17O43808 307 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 AGFG2O95081 481 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 PSG2P11465 335 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 ZNF506Q5JVG8 444 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 IBA57Q5T440 356 aaKnown RBP9.11□□□□□ -0.95
PCDH9-204ENST00000544246 RNF133Q8WVZ7 376 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 SPTY2D1-AS1A0A0U1RR47 76 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 TCRBV16S1A1N1A0A5B0 115 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 C7orf71A4D174 169 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 PATE4P0C8F1 98 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 ANOS1P23352 680 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 NUBP1P53384 320 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 PSG9Q00887 426 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 OR1K1Q8NGR3 316 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 OR6X1Q8NH79 312 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 OR4A5Q8NH83 315 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 PRR7Q8TB68 274 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 PRELID3AQ96N28 172 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 RNF122Q9H9V4 155 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 POLR2AP24928 1970 aaKnown RBP9.11□□□□□ -0.95
PCDH9-204ENST00000544246 IGHV3OR15-7A0A075B7D8 119 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 SMIM13P0DJ93 91 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms