RNA–Protein interactions for RNA: ENST00000544060.1

TDG-208, Transcript of thymine DNA glycosylase, humanhuman

TSL 1 (best)

Gene TDG, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDG-208ENST00000544060 KHDC1LQ5JSQ8 128 aa14.93□□□□□ -0.02
TDG-208ENST00000544060 SYT6Q5T7P8 510 aaPredicted RBP14.93□□□□□ -0.02
TDG-208ENST00000544060 SAMD5Q5TGI4 173 aa14.93□□□□□ -0.02
TDG-208ENST00000544060 RNLSQ5VYX0 342 aa14.93□□□□□ -0.02
TDG-208ENST00000544060 PRR18Q8N4B5 295 aa14.93□□□□□ -0.02
TDG-208ENST00000544060 TMEM104Q8NE00 496 aa14.93□□□□□ -0.02
TDG-208ENST00000544060 OR4K15Q8NH41 348 aa14.93□□□□□ -0.02
TDG-208ENST00000544060 FAM46BQ96A09 425 aa14.93□□□□□ -0.02
TDG-208ENST00000544060 TMED9Q9BVK6 235 aa14.93□□□□□ -0.02
TDG-208ENST00000544060 CST11Q9H112 138 aa14.93□□□□□ -0.02
TDG-208ENST00000544060 C12orf77C9JDV5 145 aa14.92□□□□□ -0.02
TDG-208ENST00000544060 FUT3P21217 361 aa14.92□□□□□ -0.02
TDG-208ENST00000544060 REG1BP48304 166 aa14.92□□□□□ -0.02
TDG-208ENST00000544060 AQP4P55087 323 aa14.92□□□□□ -0.02
TDG-208ENST00000544060 INSL4Q14641 139 aa14.92□□□□□ -0.02
TDG-208ENST00000544060 SPHARQ15513 63 aa14.92□□□□□ -0.02
TDG-208ENST00000544060 MED22Q15528 200 aa14.92□□□□□ -0.02
TDG-208ENST00000544060 BEAN1Q3B7T3 259 aa14.92□□□□□ -0.02
TDG-208ENST00000544060 RBM48Q5RL73 367 aaKnown RBP14.92□□□□□ -0.02
TDG-208ENST00000544060 TRAT1Q6PIZ9 186 aa14.92□□□□□ -0.02
TDG-208ENST00000544060 LINC00311Q8N616 119 aa14.92□□□□□ -0.02
TDG-208ENST00000544060 C8orf31Q8N9H6 132 aa14.92□□□□□ -0.02
TDG-208ENST00000544060 Q96M66 194 aa14.92□□□□□ -0.02
TDG-208ENST00000544060 GNG12Q9UBI6 72 aa14.92□□□□□ -0.02
TDG-208ENST00000544060 GHRLQ9UBU3 117 aa14.92□□□□□ -0.02
TDG-208ENST00000544060 TSSC4Q9Y5U2 329 aaPredicted RBP14.92□□□□□ -0.02
TDG-208ENST00000544060 PLXNB1O43157 2135 aa14.92□□□□□ -0.02
TDG-208ENST00000544060 IGHV1-3A0A0C4DH29 117 aa14.91□□□□□ -0.02
TDG-208ENST00000544060 CA11O75493 328 aa14.91□□□□□ -0.02
TDG-208ENST00000544060 UBBP0CG47 229 aa14.91□□□□□ -0.02
TDG-208ENST00000544060 VHLP40337 213 aa14.91□□□□□ -0.02
TDG-208ENST00000544060 LOXL3P58215 753 aa14.91□□□□□ -0.02
TDG-208ENST00000544060 TMEM30BQ3MIR4 351 aa14.91□□□□□ -0.02
TDG-208ENST00000544060 Q3ZCU0 254 aa14.91□□□□□ -0.02
TDG-208ENST00000544060 LYPD6Q86Y78 171 aa14.91□□□□□ -0.02
TDG-208ENST00000544060 C5orf56Q8N8D9 126 aa14.91□□□□□ -0.02
TDG-208ENST00000544060 TPRKBQ9Y3C4 175 aa14.91□□□□□ -0.02
TDG-208ENST00000544060 IGHV3-72A0A0B4J1Y9 119 aa14.9□□□□□ -0.02
TDG-208ENST00000544060 UBE2QL1A1L167 161 aa14.9□□□□□ -0.02
TDG-208ENST00000544060 H0YHG0 523 aa14.9□□□□□ -0.02
TDG-208ENST00000544060 FGF16O43320 207 aa14.9□□□□□ -0.02
TDG-208ENST00000544060 MPIG6BO95866 241 aa14.9□□□□□ -0.02
TDG-208ENST00000544060 HBZP02008 142 aa14.9□□□□□ -0.02
TDG-208ENST00000544060 GLAP06280 429 aa14.9□□□□□ -0.02
TDG-208ENST00000544060 CD33P20138 364 aa14.9□□□□□ -0.02
TDG-208ENST00000544060 TCTEX1D4Q5JR98 221 aa14.9□□□□□ -0.02
TDG-208ENST00000544060 FAM27D1Q5T7N8 215 aa14.9□□□□□ -0.02
TDG-208ENST00000544060 GLT8D1Q68CQ7 371 aa14.9□□□□□ -0.02
TDG-208ENST00000544060 FAM53AQ6NSI3 398 aaPredicted RBP14.9□□□□□ -0.02
TDG-208ENST00000544060 UNQ9370/PRO34162Q6UXP9 181 aa14.9□□□□□ -0.02
TDG-208ENST00000544060 OR10V1Q8NGI7 309 aa14.9□□□□□ -0.02
TDG-208ENST00000544060 PHYHIPQ92561 330 aa14.9□□□□□ -0.02
TDG-208ENST00000544060 KCNIP1Q9NZI2 227 aa14.9□□□□□ -0.02
TDG-208ENST00000544060 PSMB11A5LHX3 300 aa14.89□□□□□ -0.03
TDG-208ENST00000544060 NCBP2LA6PVI3 153 aaKnown RBP14.89□□□□□ -0.03
TDG-208ENST00000544060 PDCD6O75340 191 aa14.89□□□□□ -0.03
TDG-208ENST00000544060 SC5DO75845 299 aa14.89□□□□□ -0.03
TDG-208ENST00000544060 PF4P02776 101 aa14.89□□□□□ -0.03
TDG-208ENST00000544060 RCC1P18754 421 aaPredicted RBP14.89□□□□□ -0.03
TDG-208ENST00000544060 HSD17B12Q53GQ0 312 aa14.89□□□□□ -0.03
TDG-208ENST00000544060 NKAPLQ5M9Q1 402 aa14.89□□□□□ -0.03
TDG-208ENST00000544060 KPRPQ5T749 579 aaPredicted RBP14.89□□□□□ -0.03
TDG-208ENST00000544060 C10orf99Q6UWK7 81 aa14.89□□□□□ -0.03
TDG-208ENST00000544060 CEACAM19Q7Z692 300 aa14.89□□□□□ -0.03
TDG-208ENST00000544060 GAPTQ8N292 157 aa14.89□□□□□ -0.03
TDG-208ENST00000544060 OR1L1Q8NH94 360 aa14.89□□□□□ -0.03
TDG-208ENST00000544060 NRG4Q8WWG1 115 aa14.89□□□□□ -0.03
TDG-208ENST00000544060 RTN4IP1Q8WWV3 396 aaPredicted RBP14.89□□□□□ -0.03
TDG-208ENST00000544060 UFD1Q92890 307 aa14.89□□□□□ -0.03
TDG-208ENST00000544060 LSM2Q9Y333 95 aaKnown RBP14.89□□□□□ -0.03
TDG-208ENST00000544060 SERPINE3A8MV23 424 aa14.88□□□□□ -0.03
TDG-208ENST00000544060 TXNL1O43396 289 aa14.88□□□□□ -0.03
TDG-208ENST00000544060 SLC35A2P78381 396 aa14.88□□□□□ -0.03
TDG-208ENST00000544060 OXLD1Q5BKU9 147 aa14.88□□□□□ -0.03
TDG-208ENST00000544060 LIPKQ5VXJ0 399 aa14.88□□□□□ -0.03
TDG-208ENST00000544060 SIGIRRQ6IA17 410 aa14.88□□□□□ -0.03
TDG-208ENST00000544060 SLC25A48Q6ZT89 311 aaKnown RBP14.88□□□□□ -0.03
TDG-208ENST00000544060 LRRTM1Q86UE6 522 aa14.88□□□□□ -0.03
TDG-208ENST00000544060 IZUMO1Q8IYV9 350 aa14.88□□□□□ -0.03
TDG-208ENST00000544060 OR2T10Q8NGZ9 312 aa14.88□□□□□ -0.03
TDG-208ENST00000544060 SGCDQ92629 289 aa14.88□□□□□ -0.03
TDG-208ENST00000544060 EAF1Q96JC9 268 aaPredicted RBP14.88□□□□□ -0.03
TDG-208ENST00000544060 NEDD4LQ96PU5 975 aa14.88□□□□□ -0.03
TDG-208ENST00000544060 VCX3BQ9H321 246 aa14.88□□□□□ -0.03
TDG-208ENST00000544060 TAF9BQ9HBM6 251 aa14.88□□□□□ -0.03
TDG-208ENST00000544060 SLC31A2O15432 143 aa14.87□□□□□ -0.03
TDG-208ENST00000544060 HSMCR30P0CW71 290 aa14.87□□□□□ -0.03
TDG-208ENST00000544060 SRMP19623 302 aa14.87□□□□□ -0.03
TDG-208ENST00000544060 GP2P55259 537 aaKnown RBP14.87□□□□□ -0.03
TDG-208ENST00000544060 EBI3Q14213 229 aa14.87□□□□□ -0.03
TDG-208ENST00000544060 C1orf100Q5SVJ3 147 aa14.87□□□□□ -0.03
TDG-208ENST00000544060 OR10K2Q6IF99 312 aa14.87□□□□□ -0.03
TDG-208ENST00000544060 SLC35E3Q7Z769 313 aa14.87□□□□□ -0.03
TDG-208ENST00000544060 ZNF329Q86UD4 541 aa14.87□□□□□ -0.03
TDG-208ENST00000544060 TGIF2LXQ8IUE1 241 aa14.87□□□□□ -0.03
TDG-208ENST00000544060 FOXRED2Q8IWF2 684 aa14.87□□□□□ -0.03
TDG-208ENST00000544060 ZNF439Q8NDP4 499 aa14.87□□□□□ -0.03
TDG-208ENST00000544060 CHPT1Q8WUD6 406 aa14.87□□□□□ -0.03
TDG-208ENST00000544060 TMEM203Q969S6 136 aa14.87□□□□□ -0.03
TDG-208ENST00000544060 ST6GALNAC6Q969X2 333 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms