RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 ZNF764Q96H86 408 aaPredicted RBP13.52□□□□□ -0.25
CHD4-210ENST00000544040 PARD6GQ9BYG4 376 aaPredicted RBP13.52□□□□□ -0.25
CHD4-210ENST00000544040 IGKV3D-11A0A0A0MRZ8 115 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 UBE2L6O14933 153 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 EML2O95834 649 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 IGKV3-11P04433 115 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 C19orf54Q5BKX5 351 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 HMGCLL1Q8TB92 370 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 TMEM189A5PLL7 270 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 ZNF98A6NK75 572 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 PITX3O75364 302 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 J3QR06 171 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 SYNGR1O43759 233 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 KLK2P20151 261 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 C9orf50Q5SZB4 431 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 ASB5Q8WWX0 329 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 OR2H1Q9GZK4 316 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 CES1P1Q9UKY3 287 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 NUP98P52948 1817 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 LIPT2A6NK58 231 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 PLAUP00749 431 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 CT55Q8WUE5 264 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 RNF122Q9H9V4 155 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 GCGP01275 180 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 NAAAQ02083 359 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 FAM209BQ5JX69 171 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 VN1R4Q7Z5H5 301 aa13.51□□□□□ -0.25
CHD4-210ENST00000544040 NDUFB4O95168 129 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 ZNF665Q9H7R5 613 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 A0A1B0GU03 582 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 KBTBD11O94819 623 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 COL10A1Q03692 680 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 CALHM1Q8IU99 346 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 WFIKKN1Q96NZ8 548 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 UCN2Q96RP3 112 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 PCGF1Q9BSM1 259 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 RNF7Q9UBF6 113 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 IGHV3OR16-12A0A075B7B8 117 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 VSIG8P0DPA2 414 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 KLRB1Q12918 225 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 UBALD2Q8IYN6 164 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 HIST1H4GQ99525 98 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 SOD3P08294 240 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 CXCL2P19875 107 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 MMP16P51512 607 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 SLC25A40Q8TBP6 338 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 FAM131CQ96AQ9 280 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 TGIF2-C20orf24A0A0A6YYL0 155 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 CXorf65A6NEN9 183 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 MMDQ15546 238 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 WDR25Q64LD2 544 aaPredicted RBP13.5□□□□□ -0.25
CHD4-210ENST00000544040 ATG4DQ86TL0 474 aaPredicted RBP13.5□□□□□ -0.25
CHD4-210ENST00000544040 OR5AC2Q9NZP5 309 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 PHIPQ8WWQ0 1821 aa13.5□□□□□ -0.25
CHD4-210ENST00000544040 TRBV23-1A0A0A0MS06 115 aa13.49□□□□□ -0.25
CHD4-210ENST00000544040 RPL36A-HNRNPH2H7BZ11 118 aa13.49□□□□□ -0.25
CHD4-210ENST00000544040 HERPUD1Q15011 391 aa13.49□□□□□ -0.25
CHD4-210ENST00000544040 TPRX1Q8N7U7 411 aa13.49□□□□□ -0.25
CHD4-210ENST00000544040 PGLYRP4Q96LB8 373 aa13.49□□□□□ -0.25
CHD4-210ENST00000544040 PGLYRP3Q96LB9 341 aa13.49□□□□□ -0.25
CHD4-210ENST00000544040 SCN11AQ9UI33 1791 aa13.49□□□□□ -0.25
CHD4-210ENST00000544040 EIF3GO75821 320 aaKnown RBP eCLIP13.49□□□□□ -0.256e-9■■■■□ 22.8
CHD4-210ENST00000544040 ZNF735P0CB33 412 aa13.49□□□□□ -0.25
CHD4-210ENST00000544040 GLULP15104 373 aa13.49□□□□□ -0.25
CHD4-210ENST00000544040 COL9A1P20849 921 aa13.49□□□□□ -0.25
CHD4-210ENST00000544040 ZNF79Q15937 498 aa13.49□□□□□ -0.25
CHD4-210ENST00000544040 DCAF12L2Q5VW00 463 aa13.49□□□□□ -0.25
CHD4-210ENST00000544040 PRR7Q8TB68 274 aa13.49□□□□□ -0.25
CHD4-210ENST00000544040 ADAMTS17Q8TE56 1095 aa13.49□□□□□ -0.25
CHD4-210ENST00000544040 MAS1LP35410 378 aa13.49□□□□□ -0.25
CHD4-210ENST00000544040 AMMECR1LQ6DCA0 310 aa13.49□□□□□ -0.25
CHD4-210ENST00000544040 TNFSF18Q9UNG2 199 aa13.49□□□□□ -0.25
CHD4-210ENST00000544040 IGLV3-16A0A075B6K0 115 aa13.49□□□□□ -0.25
CHD4-210ENST00000544040 RAC3P60763 192 aa13.49□□□□□ -0.25
CHD4-210ENST00000544040 KCNMB2Q9Y691 235 aa13.49□□□□□ -0.25
CHD4-210ENST00000544040 N4BP2Q86UW6 1770 aaPredicted RBP13.49□□□□□ -0.25
CHD4-210ENST00000544040 LOXL3P58215 753 aa13.49□□□□□ -0.25
CHD4-210ENST00000544040 TTC32Q5I0X7 151 aa13.49□□□□□ -0.25
CHD4-210ENST00000544040 ID1P41134 155 aa13.48□□□□□ -0.25
CHD4-210ENST00000544040 TMEM92Q6UXU6 159 aa13.48□□□□□ -0.25
CHD4-210ENST00000544040 BCL2P10415 239 aa13.48□□□□□ -0.25
CHD4-210ENST00000544040 ERVFRD-1P60508 538 aa13.48□□□□□ -0.25
CHD4-210ENST00000544040 PXMP4Q9Y6I8 212 aa13.48□□□□□ -0.25
CHD4-210ENST00000544040 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.48□□□□□ -0.25
CHD4-210ENST00000544040 PAFAH1B2P68402 229 aa13.48□□□□□ -0.25
CHD4-210ENST00000544040 OR1L8Q8NGR8 309 aa13.48□□□□□ -0.25
CHD4-210ENST00000544040 IL19Q9UHD0 177 aa13.48□□□□□ -0.25
CHD4-210ENST00000544040 TMEM238LA0A1B0GVL6 79 aa13.48□□□□□ -0.25
CHD4-210ENST00000544040 A6NJY4 79 aa13.48□□□□□ -0.25
CHD4-210ENST00000544040 CTGFP29279 349 aa13.48□□□□□ -0.25
CHD4-210ENST00000544040 KIR3DL2P43630 455 aa13.48□□□□□ -0.25
CHD4-210ENST00000544040 LRRC75BQ2VPJ9 315 aa13.48□□□□□ -0.25
CHD4-210ENST00000544040 ATOH7Q8N100 152 aa13.48□□□□□ -0.25
CHD4-210ENST00000544040 MS4A3Q96HJ5 214 aa13.48□□□□□ -0.25
CHD4-210ENST00000544040 MRGPRX3Q96LB0 322 aa13.48□□□□□ -0.25
CHD4-210ENST00000544040 RASL10BQ96S79 203 aa13.48□□□□□ -0.25
CHD4-210ENST00000544040 MRPS18BQ9Y676 258 aaKnown RBP13.48□□□□□ -0.25
CHD4-210ENST00000544040 OR2A4O95047 310 aa13.48□□□□□ -0.25
CHD4-210ENST00000544040 NUDT3O95989 172 aa13.48□□□□□ -0.25
CHD4-210ENST00000544040 COX6CP09669 75 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms