RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 FOXB2Q5VYV0 432 aa11.12□□□□□ -0.63
SP140-213ENST00000543928 OR52W1Q6IF63 320 aa11.12□□□□□ -0.63
SP140-213ENST00000543928 ZNF880Q6PDB4 577 aa11.12□□□□□ -0.63
SP140-213ENST00000543928 MOB1BQ7L9L4 216 aa11.12□□□□□ -0.63
SP140-213ENST00000543928 PRR18Q8N4B5 295 aa11.12□□□□□ -0.63
SP140-213ENST00000543928 OR1L1Q8NH94 360 aa11.12□□□□□ -0.63
SP140-213ENST00000543928 C22orf15Q8WYQ4 148 aa11.12□□□□□ -0.63
SP140-213ENST00000543928 DGCR14Q96DF8 476 aaKnown RBP11.12□□□□□ -0.63
SP140-213ENST00000543928 DCUN1D5Q9BTE7 237 aa11.12□□□□□ -0.63
SP140-213ENST00000543928 SLIRPQ9GZT3 109 aaKnown RBP11.12□□□□□ -0.63
SP140-213ENST00000543928 MS4A7Q9GZW8 240 aaPredicted RBP11.12□□□□□ -0.63
SP140-213ENST00000543928 TMEM133Q9H2Q1 129 aa11.12□□□□□ -0.63
SP140-213ENST00000543928 RAB9BQ9NP90 201 aa11.12□□□□□ -0.63
SP140-213ENST00000543928 NIPBLQ6KC79 2804 aaeCLIP11.11□□□□□ -0.63
SP140-213ENST00000543928 MXRA5Q9NR99 2828 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 POM121CA8CG34 1229 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 FAM25AB3EWG3 89 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 FAM25CB3EWG5 89 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 FAM25GB3EWG6 89 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 CTDSP2O14595 271 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 RGS5O15539 181 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 HBZP02008 142 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 FPR2P25090 351 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 TALDO1P37837 337 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 GNG2P59768 71 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 BPIFB3P59826 476 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 SCGB2A2Q13296 93 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 HMGN3Q15651 99 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 PNLIPRP3Q17RR3 467 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 TMEM69Q5SWH9 247 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 UTF1Q5T230 341 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 C5orf24Q7Z6I8 188 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 ZNF554Q86TJ5 538 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 BCL6BQ8N143 479 aaPredicted RBP11.11□□□□□ -0.63
SP140-213ENST00000543928 OR10A7Q8NGE5 316 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 NUDCD2Q8WVJ2 157 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 AUNIPQ9H7T9 357 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 ZNF286AQ9HBT8 521 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 Q9N2K0 584 aa11.11□□□□□ -0.63
SP140-213ENST00000543928 SOX21Q9Y651 276 aaPredicted RBP11.11□□□□□ -0.63
SP140-213ENST00000543928 SETD2Q9BYW2 2564 aaPredicted RBP11.11□□□□□ -0.63
SP140-213ENST00000543928 A0A087X0M5 115 aa11.1□□□□□ -0.63
SP140-213ENST00000543928 IGHV2-26A0A0B4J1V2 119 aa11.1□□□□□ -0.63
SP140-213ENST00000543928 A0A1B0GX30 115 aa11.1□□□□□ -0.63
SP140-213ENST00000543928 F2RL2O00254 374 aa11.1□□□□□ -0.63
SP140-213ENST00000543928 SDCBPO00560 298 aaPredicted RBP11.1□□□□□ -0.63
SP140-213ENST00000543928 NPFFO15130 113 aa11.1□□□□□ -0.63
SP140-213ENST00000543928 ARG1P05089 322 aa11.1□□□□□ -0.63
SP140-213ENST00000543928 FCGR3AP08637 254 aa11.1□□□□□ -0.63
SP140-213ENST00000543928 PTHLHP12272 177 aa11.1□□□□□ -0.63
SP140-213ENST00000543928 MNDAP41218 407 aa11.1□□□□□ -0.63
SP140-213ENST00000543928 TAS2R20P59543 309 aa11.1□□□□□ -0.63
SP140-213ENST00000543928 HLA-DRB3P79483 266 aa11.1□□□□□ -0.63
SP140-213ENST00000543928 C9orf139Q6ZV77 190 aa11.1□□□□□ -0.63
SP140-213ENST00000543928 ABHD12Q8N2K0 398 aa11.1□□□□□ -0.63
SP140-213ENST00000543928 OR11H6Q8NGC7 330 aa11.1□□□□□ -0.63
SP140-213ENST00000543928 MCFD2Q8NI22 146 aa11.1□□□□□ -0.63
SP140-213ENST00000543928 CLEC7AQ9BXN2 247 aa11.1□□□□□ -0.63
SP140-213ENST00000543928 C6orf62Q9GZU0 229 aaPredicted RBP11.1□□□□□ -0.63
SP140-213ENST00000543928 MIXL1Q9H2W2 232 aa11.1□□□□□ -0.63
SP140-213ENST00000543928 ZNF230Q9UIE0 474 aaPredicted RBP11.1□□□□□ -0.63
SP140-213ENST00000543928 MGAT4AQ9UM21 535 aa11.1□□□□□ -0.63
SP140-213ENST00000543928 ZFHX3Q15911 3703 aa11.1□□□□□ -0.63
SP140-213ENST00000543928 IGHV3-43A0A0B4J1X8 118 aa11.09□□□□□ -0.63
SP140-213ENST00000543928 MEIOCA2RUB1 952 aa11.09□□□□□ -0.63
SP140-213ENST00000543928 SSX5O60225 188 aa11.09□□□□□ -0.63
SP140-213ENST00000543928 IGHV3-7P01780 117 aa11.09□□□□□ -0.63
SP140-213ENST00000543928 MELTFP08582 738 aa11.09□□□□□ -0.63
SP140-213ENST00000543928 IGHV3-43DP0DP04 118 aa11.09□□□□□ -0.63
SP140-213ENST00000543928 CD34P28906 385 aa11.09□□□□□ -0.63
SP140-213ENST00000543928 SAA4P35542 130 aa11.09□□□□□ -0.63
SP140-213ENST00000543928 LOXL3P58215 753 aa11.09□□□□□ -0.63
SP140-213ENST00000543928 PITPNAQ00169 270 aa11.09□□□□□ -0.63
SP140-213ENST00000543928 MADCAM1Q13477 382 aa11.09□□□□□ -0.63
SP140-213ENST00000543928 TMEM30BQ3MIR4 351 aa11.09□□□□□ -0.63
SP140-213ENST00000543928 ZNF626Q68DY1 528 aa11.09□□□□□ -0.63
SP140-213ENST00000543928 LAX1Q8IWV1 398 aa11.09□□□□□ -0.63
SP140-213ENST00000543928 OR52M1Q8NGK5 317 aa11.09□□□□□ -0.63
SP140-213ENST00000543928 MAFIPQ8WZ33 124 aa11.09□□□□□ -0.63
SP140-213ENST00000543928 LEAP2Q969E1 77 aa11.09□□□□□ -0.63
SP140-213ENST00000543928 SLC6A7Q99884 636 aa11.09□□□□□ -0.63
SP140-213ENST00000543928 NXF2Q9GZY0 626 aaKnown RBP11.09□□□□□ -0.63
SP140-213ENST00000543928 GFOD1Q9NXC2 390 aa11.09□□□□□ -0.63
SP140-213ENST00000543928 MRPS7Q9Y2R9 242 aaKnown RBP11.09□□□□□ -0.63
SP140-213ENST00000543928 A0A0U1RQK1 487 aa11.08□□□□□ -0.64
SP140-213ENST00000543928 A6NHS1 94 aa11.08□□□□□ -0.64
SP140-213ENST00000543928 ODF3BA8MYP8 253 aa11.08□□□□□ -0.64
SP140-213ENST00000543928 TRDCB7Z8K6 153 aa11.08□□□□□ -0.64
SP140-213ENST00000543928 TOR1AO14656 332 aa11.08□□□□□ -0.64
SP140-213ENST00000543928 SCTP09683 121 aa11.08□□□□□ -0.64
SP140-213ENST00000543928 DTYMKP23919 212 aa11.08□□□□□ -0.64
SP140-213ENST00000543928 LGALS4P56470 323 aa11.08□□□□□ -0.64
SP140-213ENST00000543928 MIDNQ504T8 468 aa11.08□□□□□ -0.64
SP140-213ENST00000543928 FAM53AQ6NSI3 398 aaPredicted RBP11.08□□□□□ -0.64
SP140-213ENST00000543928 OR52L2PQ8NGH6 319 aa11.08□□□□□ -0.64
SP140-213ENST00000543928 OR10V1Q8NGI7 309 aa11.08□□□□□ -0.64
SP140-213ENST00000543928 OR9G1Q8NH87 305 aa11.08□□□□□ -0.64
SP140-213ENST00000543928 IL1F10Q8WWZ1 152 aa11.08□□□□□ -0.64
SP140-213ENST00000543928 GALMQ96C23 342 aa11.08□□□□□ -0.64
SP140-213ENST00000543928 ST6GALNAC5Q9BVH7 336 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms