RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 OR2W1Q9Y3N9 320 aa11.73□□□□□ -0.53
VPS33A-208ENST00000543633 CABIN1Q9Y6J0 2220 aa11.73□□□□□ -0.53
VPS33A-208ENST00000543633 TRBV24-1A0A075B6N3 115 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 CLDN34H7C241 214 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 IFNA1P01562 189 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 HAAOP46952 286 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 ZNF468Q5VIY5 522 aaPredicted RBP11.72□□□□□ -0.53
VPS33A-208ENST00000543633 PEAR1Q5VY43 1037 aaPredicted RBP11.72□□□□□ -0.53
VPS33A-208ENST00000543633 ZNF324BQ6AW86 544 aaPredicted RBP11.72□□□□□ -0.53
VPS33A-208ENST00000543633 MOB1BQ7L9L4 216 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 MRPL21Q7Z2W9 205 aaKnown RBP11.72□□□□□ -0.53
VPS33A-208ENST00000543633 GPR146Q96CH1 333 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 FGF23Q9GZV9 251 aaPredicted RBP11.72□□□□□ -0.53
VPS33A-208ENST00000543633 NCKAP5O14513 1909 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 A0A0G2JMM0 328 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 A0A1W2PPB8 328 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 A0A1W2PRS3 328 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 KIR3DP1A8MWS1 328 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 NTN3O00634 580 aaPredicted RBP11.72□□□□□ -0.53
VPS33A-208ENST00000543633 PTBP3O95758 552 aaKnown RBP11.72□□□□□ -0.53
VPS33A-208ENST00000543633 OPN1MWP04001 364 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 SERPINE2P07093 398 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 OPN1MW2P0DN77 364 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 OPN1MW3P0DN78 364 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 RPS18P62269 152 aaKnown RBP11.72□□□□□ -0.53
VPS33A-208ENST00000543633 ZNF787Q6DD87 383 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 SLC25A24Q6NUK1 477 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 ZNF343Q6P1L6 599 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 THNSL2Q86YJ6 484 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 ZNF295-AS1Q8N0V1 137 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 HIST3H2BBQ8N257 126 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 SCGB1C1Q8TD33 95 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 NEK7Q8TDX7 302 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 PINX1Q96BK5 328 aaKnown RBP11.72□□□□□ -0.53
VPS33A-208ENST00000543633 MTCH1Q9NZJ7 389 aa11.72□□□□□ -0.53
VPS33A-208ENST00000543633 CYB5BO43169 146 aa11.71□□□□□ -0.53
VPS33A-208ENST00000543633 CEBPGP53567 150 aa11.71□□□□□ -0.53
VPS33A-208ENST00000543633 GFRA1P56159 465 aa11.71□□□□□ -0.53
VPS33A-208ENST00000543633 HBG1P69891 147 aa11.71□□□□□ -0.53
VPS33A-208ENST00000543633 HBG2P69892 147 aa11.71□□□□□ -0.53
VPS33A-208ENST00000543633 FAM210BQ96KR6 192 aa11.71□□□□□ -0.53
VPS33A-208ENST00000543633 PFDN5Q99471 154 aa11.71□□□□□ -0.53
VPS33A-208ENST00000543633 TGIF2-C20orf24A0A0A6YYL0 155 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 OR5B21A6NL26 309 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 APLNRP35414 380 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 MDH2P40926 338 aaKnown RBP11.7□□□□□ -0.54
VPS33A-208ENST00000543633 GPM6AP51674 278 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 ZFP36L1Q07352 338 aaKnown RBP11.7□□□□□ -0.54
VPS33A-208ENST00000543633 HLA-BQ31612 363 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 TCEAL6Q6IPX3 200 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 MRGPRGQ86SM5 289 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 ZNF525Q8N782 197 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 OR10J5Q8NHC4 309 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 AGMATQ9BSE5 352 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 BCL2L14Q9BZR8 327 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 PKIBQ9C010 78 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 STRADBQ9C0K7 418 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 SDF2L1Q9HCN8 221 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 GNG13Q9P2W3 67 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 VAX2Q9UIW0 290 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 RTTNQ86VV8 2226 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 FAM90A26D6RGX4 464 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 SYNGR2O43760 224 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 MRPL33O75394 65 aaKnown RBP11.7□□□□□ -0.54
VPS33A-208ENST00000543633 HIST1H1BP16401 226 aaKnown RBP11.7□□□□□ -0.54
VPS33A-208ENST00000543633 DUSP3P51452 185 aaPredicted RBP11.7□□□□□ -0.54
VPS33A-208ENST00000543633 WIPI1Q5MNZ9 446 aaPredicted RBP11.7□□□□□ -0.54
VPS33A-208ENST00000543633 OR10V1Q8NGI7 309 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 CA5BP1Q8WTZ4 195 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 PSMF1Q92530 271 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 HIST1H2AAQ96QV6 131 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 RPRMQ9NS64 109 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 GFOD1Q9NXC2 390 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 TIMM9Q9Y5J7 89 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 MPC1Q9Y5U8 109 aa11.7□□□□□ -0.54
VPS33A-208ENST00000543633 A0A0G2JRQ6 117 aa11.69□□□□□ -0.54
VPS33A-208ENST00000543633 RAB11AP62491 216 aa11.69□□□□□ -0.54
VPS33A-208ENST00000543633 ARF1P84077 181 aaKnown RBP11.69□□□□□ -0.54
VPS33A-208ENST00000543633 LRRC75BQ2VPJ9 315 aa11.69□□□□□ -0.54
VPS33A-208ENST00000543633 TMEM41BQ5BJD5 291 aa11.69□□□□□ -0.54
VPS33A-208ENST00000543633 SPNS3Q6ZMD2 512 aa11.69□□□□□ -0.54
VPS33A-208ENST00000543633 ZNF573Q86YE8 665 aa11.69□□□□□ -0.54
VPS33A-208ENST00000543633 ABHD3Q8WU67 409 aa11.69□□□□□ -0.54
VPS33A-208ENST00000543633 FSCN3Q9NQT6 498 aa11.69□□□□□ -0.54
VPS33A-208ENST00000543633 LIN7CQ9NUP9 197 aaKnown RBP11.69□□□□□ -0.54
VPS33A-208ENST00000543633 TTC28Q96AY4 2481 aa11.69□□□□□ -0.54
VPS33A-208ENST00000543633 OR5H1A6NKK0 313 aa11.69□□□□□ -0.54
VPS33A-208ENST00000543633 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.69□□□□□ -0.54
VPS33A-208ENST00000543633 IFNA10P01566 189 aa11.69□□□□□ -0.54
VPS33A-208ENST00000543633 TRGC2P03986 189 aa11.69□□□□□ -0.54
VPS33A-208ENST00000543633 RFPL3SP0C7P2 107 aa11.69□□□□□ -0.54
VPS33A-208ENST00000543633 GDF1P27539 372 aa11.69□□□□□ -0.54
VPS33A-208ENST00000543633 ARR3P36575 388 aa11.69□□□□□ -0.54
VPS33A-208ENST00000543633 TMEM267Q0VDI3 215 aaPredicted RBP11.69□□□□□ -0.54
VPS33A-208ENST00000543633 RNASE11Q8TAA1 199 aaKnown RBP11.69□□□□□ -0.54
VPS33A-208ENST00000543633 OR5P3Q8WZ94 311 aa11.69□□□□□ -0.54
VPS33A-208ENST00000543633 BOKQ9UMX3 212 aaPredicted RBP11.69□□□□□ -0.54
VPS33A-208ENST00000543633 URGCP-MRPS24S4R325 110 aa11.69□□□□□ -0.54
VPS33A-208ENST00000543633 WDR87Q6ZQQ6 2873 aa11.69□□□□□ -0.54
VPS33A-208ENST00000543633 CD300LBA8K4G0 201 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms