RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 PHF21AQ96BD5 680 aa13.92□□□□□ -0.18
RABGGTA-203ENST00000543002 PRDM13Q9H4Q3 707 aa13.92□□□□□ -0.18
RABGGTA-203ENST00000543002 ZMAT3Q9HA38 289 aaKnown RBP13.92□□□□□ -0.18
RABGGTA-203ENST00000543002 TAF9BQ9HBM6 251 aa13.92□□□□□ -0.18
RABGGTA-203ENST00000543002 A0A0A6YYJ9 748 aa13.91□□□□□ -0.18
RABGGTA-203ENST00000543002 F2RL2O00254 374 aa13.91□□□□□ -0.18
RABGGTA-203ENST00000543002 HBZP02008 142 aa13.91□□□□□ -0.18
RABGGTA-203ENST00000543002 ARG1P05089 322 aa13.91□□□□□ -0.18
RABGGTA-203ENST00000543002 LGALS4P56470 323 aa13.91□□□□□ -0.18
RABGGTA-203ENST00000543002 MRPS15P82914 257 aaKnown RBP13.91□□□□□ -0.18
RABGGTA-203ENST00000543002 HMGN3Q15651 99 aa13.91□□□□□ -0.18
RABGGTA-203ENST00000543002 LTC4SQ16873 150 aa13.91□□□□□ -0.18
RABGGTA-203ENST00000543002 TMEM30BQ3MIR4 351 aa13.91□□□□□ -0.18
RABGGTA-203ENST00000543002 SIGLECL1Q8N7X8 197 aa13.91□□□□□ -0.18
RABGGTA-203ENST00000543002 SAMD12Q8N8I0 201 aa13.91□□□□□ -0.18
RABGGTA-203ENST00000543002 UBALD1Q8TB05 177 aa13.91□□□□□ -0.18
RABGGTA-203ENST00000543002 AP3S1Q92572 193 aa13.91□□□□□ -0.18
RABGGTA-203ENST00000543002 CMTM3Q96MX0 182 aa13.91□□□□□ -0.18
RABGGTA-203ENST00000543002 RBM38Q9H0Z9 239 aaKnown RBP13.91□□□□□ -0.18
RABGGTA-203ENST00000543002 ZNF286AQ9HBT8 521 aa13.91□□□□□ -0.18
RABGGTA-203ENST00000543002 DIABLOQ9NR28 239 aa13.91□□□□□ -0.18
RABGGTA-203ENST00000543002 MDFIC2A0A1B0GVS7 189 aa13.9□□□□□ -0.18
RABGGTA-203ENST00000543002 FAM172BPA6NC97 362 aa13.9□□□□□ -0.18
RABGGTA-203ENST00000543002 SDCBPO00560 298 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-203ENST00000543002 TCF21O43680 179 aa13.9□□□□□ -0.18
RABGGTA-203ENST00000543002 GSTP1P09211 210 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-203ENST00000543002 SOX6P35712 828 aa13.9□□□□□ -0.18
RABGGTA-203ENST00000543002 ARFRP1Q13795 201 aa13.9□□□□□ -0.18
RABGGTA-203ENST00000543002 ZNF260Q3ZCT1 412 aa13.9□□□□□ -0.18
RABGGTA-203ENST00000543002 UTF1Q5T230 341 aa13.9□□□□□ -0.18
RABGGTA-203ENST00000543002 MZT2AQ6P582 158 aa13.9□□□□□ -0.18
RABGGTA-203ENST00000543002 RBMS3Q6XE24 437 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-203ENST00000543002 OR1L1Q8NH94 360 aa13.9□□□□□ -0.18
RABGGTA-203ENST00000543002 SETD6Q8TBK2 473 aa13.9□□□□□ -0.18
RABGGTA-203ENST00000543002 DYNC2LI1Q8TCX1 351 aa13.9□□□□□ -0.18
RABGGTA-203ENST00000543002 S100A16Q96FQ6 103 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-203ENST00000543002 AJUBAQ96IF1 538 aa13.9□□□□□ -0.18
RABGGTA-203ENST00000543002 Q9N2K0 584 aa13.9□□□□□ -0.18
RABGGTA-203ENST00000543002 COMMD3Q9UBI1 195 aa13.9□□□□□ -0.18
RABGGTA-203ENST00000543002 MGAT4AQ9UM21 535 aa13.9□□□□□ -0.18
RABGGTA-203ENST00000543002 FAM96BQ9Y3D0 163 aa13.9□□□□□ -0.18
RABGGTA-203ENST00000543002 TBL2Q9Y4P3 447 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-203ENST00000543002 TRAV18A0A075B6X5 111 aa13.9□□□□□ -0.19
RABGGTA-203ENST00000543002 CCDC160A6NGH7 325 aa13.9□□□□□ -0.19
RABGGTA-203ENST00000543002 IGLV1-47P01700 117 aa13.9□□□□□ -0.19
RABGGTA-203ENST00000543002 FBP1P09467 338 aa13.9□□□□□ -0.19
RABGGTA-203ENST00000543002 LOXL3P58215 753 aa13.9□□□□□ -0.19
RABGGTA-203ENST00000543002 HILS1P60008 231 aa13.9□□□□□ -0.19
RABGGTA-203ENST00000543002 HACD4Q5VWC8 232 aa13.9□□□□□ -0.19
RABGGTA-203ENST00000543002 PRR18Q8N4B5 295 aa13.9□□□□□ -0.19
RABGGTA-203ENST00000543002 BEND2Q8NDZ0 799 aa13.9□□□□□ -0.19
RABGGTA-203ENST00000543002 OR9G1Q8NH87 305 aa13.9□□□□□ -0.19
RABGGTA-203ENST00000543002 ZNF596Q8TC21 504 aa13.9□□□□□ -0.19
RABGGTA-203ENST00000543002 ZDHHC16Q969W1 377 aa13.9□□□□□ -0.19
RABGGTA-203ENST00000543002 JMJD8Q96S16 334 aa13.9□□□□□ -0.19
RABGGTA-203ENST00000543002 GFOD1Q9NXC2 390 aa13.9□□□□□ -0.19
RABGGTA-203ENST00000543002 ELF5Q9UKW6 265 aaPredicted RBP13.9□□□□□ -0.19
RABGGTA-203ENST00000543002 TOR1AO14656 332 aa13.89□□□□□ -0.19
RABGGTA-203ENST00000543002 XRCC3O43542 346 aa13.89□□□□□ -0.19
RABGGTA-203ENST00000543002 APOA1P02647 267 aa13.89□□□□□ -0.19
RABGGTA-203ENST00000543002 PRRX1P54821 245 aa13.89□□□□□ -0.19
RABGGTA-203ENST00000543002 HTD2P86397 168 aa13.89□□□□□ -0.19
RABGGTA-203ENST00000543002 PNLIPRP3Q17RR3 467 aa13.89□□□□□ -0.19
RABGGTA-203ENST00000543002 LDLRAD2Q5SZI1 272 aa13.89□□□□□ -0.19
RABGGTA-203ENST00000543002 MINOS1Q5TGZ0 78 aa13.89□□□□□ -0.19
RABGGTA-203ENST00000543002 Q6YL49 198 aa13.89□□□□□ -0.19
RABGGTA-203ENST00000543002 C5orf24Q7Z6I8 188 aa13.89□□□□□ -0.19
RABGGTA-203ENST00000543002 LHFPL4Q7Z7J7 247 aa13.89□□□□□ -0.19
RABGGTA-203ENST00000543002 OR4P4Q8NGL7 312 aa13.89□□□□□ -0.19
RABGGTA-203ENST00000543002 C17orf50Q8WW18 174 aa13.89□□□□□ -0.19
RABGGTA-203ENST00000543002 LEAP2Q969E1 77 aa13.89□□□□□ -0.19
RABGGTA-203ENST00000543002 GALMQ96C23 342 aa13.89□□□□□ -0.19
RABGGTA-203ENST00000543002 CCDC59Q9P031 241 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-203ENST00000543002 RSL24D1Q9UHA3 163 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-203ENST00000543002 PSG11Q9UQ72 335 aa13.89□□□□□ -0.19
RABGGTA-203ENST00000543002 MINOS1-NBL1R4GNA1 71 aa13.89□□□□□ -0.19
RABGGTA-203ENST00000543002 IGHV3-43A0A0B4J1X8 118 aa13.88□□□□□ -0.19
RABGGTA-203ENST00000543002 TMEM235A6NFC5 223 aa13.88□□□□□ -0.19
RABGGTA-203ENST00000543002 J3QR06 171 aa13.88□□□□□ -0.19
RABGGTA-203ENST00000543002 ZNF701M0R085 212 aaPredicted RBP13.88□□□□□ -0.19
RABGGTA-203ENST00000543002 IGHV3-7P01780 117 aa13.88□□□□□ -0.19
RABGGTA-203ENST00000543002 EIF4EP06730 217 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-203ENST00000543002 MELTFP08582 738 aa13.88□□□□□ -0.19
RABGGTA-203ENST00000543002 FCGR3AP08637 254 aa13.88□□□□□ -0.19
RABGGTA-203ENST00000543002 IGHV3-43DP0DP04 118 aa13.88□□□□□ -0.19
RABGGTA-203ENST00000543002 HTR1DP28221 377 aa13.88□□□□□ -0.19
RABGGTA-203ENST00000543002 TALDO1P37837 337 aa13.88□□□□□ -0.19
RABGGTA-203ENST00000543002 HLA-DRB3P79483 266 aa13.88□□□□□ -0.19
RABGGTA-203ENST00000543002 PITPNAQ00169 270 aa13.88□□□□□ -0.19
RABGGTA-203ENST00000543002 HLA-DRB5Q30154 266 aa13.88□□□□□ -0.19
RABGGTA-203ENST00000543002 Q3ZCU0 254 aa13.88□□□□□ -0.19
RABGGTA-203ENST00000543002 LDLRAD3Q86YD5 345 aa13.88□□□□□ -0.19
RABGGTA-203ENST00000543002 MALSU1Q96EH3 234 aa13.88□□□□□ -0.19
RABGGTA-203ENST00000543002 MEGF9Q9H1U4 602 aa13.88□□□□□ -0.19
RABGGTA-203ENST00000543002 AUNIPQ9H7T9 357 aa13.88□□□□□ -0.19
RABGGTA-203ENST00000543002 OR2S2Q9NQN1 319 aa13.88□□□□□ -0.19
RABGGTA-203ENST00000543002 ZNRD1Q9P1U0 126 aa13.88□□□□□ -0.19
RABGGTA-203ENST00000543002 GNG12Q9UBI6 72 aa13.88□□□□□ -0.19
RABGGTA-203ENST00000543002 TRDCB7Z8K6 153 aa13.87□□□□□ -0.19
RABGGTA-203ENST00000543002 HPGDSO60760 199 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms