RNA–Protein interactions for RNA: ENST00000542896.5

PDCD2-209, Transcript of programmed cell death 2, humanhuman

TSL 2 BASIC

Gene PDCD2, Length 1,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-209ENST00000542896 UBALD1Q8TB05 177 aa20.39■□□□□ 0.85
PDCD2-209ENST00000542896 COL7A1Q02388 2944 aa20.39■□□□□ 0.85
PDCD2-209ENST00000542896 EFCAB10A6NFE3 127 aa20.38■□□□□ 0.85
PDCD2-209ENST00000542896 GTF2A1P52655 376 aaPredicted RBP20.38■□□□□ 0.85
PDCD2-209ENST00000542896 RBM11P57052 281 aaKnown RBP20.38■□□□□ 0.85
PDCD2-209ENST00000542896 MED21Q13503 144 aa20.38■□□□□ 0.85
PDCD2-209ENST00000542896 C9orf66Q5T8R8 295 aa20.38■□□□□ 0.85
PDCD2-209ENST00000542896 LINC00311Q8N616 119 aa20.38■□□□□ 0.85
PDCD2-209ENST00000542896 BPIFB6Q8NFQ5 453 aa20.38■□□□□ 0.85
PDCD2-209ENST00000542896 OR52N1Q8NH53 320 aa20.38■□□□□ 0.85
PDCD2-209ENST00000542896 CCDC107Q8WV48 283 aa20.38■□□□□ 0.85
PDCD2-209ENST00000542896 S100A13Q99584 98 aa20.38■□□□□ 0.85
PDCD2-209ENST00000542896 RASL11BQ9BPW5 248 aa20.38■□□□□ 0.85
PDCD2-209ENST00000542896 IFT22Q9H7X7 185 aa20.38■□□□□ 0.85
PDCD2-209ENST00000542896 CNOT2Q9NZN8 540 aaKnown RBP20.38■□□□□ 0.85
PDCD2-209ENST00000542896 U3KQK5 164 aa20.38■□□□□ 0.85
PDCD2-209ENST00000542896 C15orf65H3BRN8 121 aa20.37■□□□□ 0.85
PDCD2-209ENST00000542896 ELANEP08246 267 aa20.37■□□□□ 0.85
PDCD2-209ENST00000542896 CD1BP29016 333 aa20.37■□□□□ 0.85
PDCD2-209ENST00000542896 CDX1P47902 265 aaPredicted RBP20.37■□□□□ 0.85
PDCD2-209ENST00000542896 FOXE3Q13461 319 aa20.37■□□□□ 0.85
PDCD2-209ENST00000542896 KIR2DS1Q14954 304 aa20.37■□□□□ 0.85
PDCD2-209ENST00000542896 NHLRC3Q5JS37 347 aa20.37■□□□□ 0.85
PDCD2-209ENST00000542896 ATAD3CQ5T2N8 411 aa20.37■□□□□ 0.85
PDCD2-209ENST00000542896 OR52I1Q8NGK6 324 aa20.37■□□□□ 0.85
PDCD2-209ENST00000542896 GPR148Q8TDV2 347 aa20.37■□□□□ 0.85
PDCD2-209ENST00000542896 NEK7Q8TDX7 302 aa20.37■□□□□ 0.85
PDCD2-209ENST00000542896 RGP1Q92546 391 aaPredicted RBP20.37■□□□□ 0.85
PDCD2-209ENST00000542896 PRR25Q96S07 402 aa20.37■□□□□ 0.85
PDCD2-209ENST00000542896 FGF20Q9NP95 211 aaPredicted RBP20.37■□□□□ 0.85
PDCD2-209ENST00000542896 GFOD1Q9NXC2 390 aa20.37■□□□□ 0.85
PDCD2-209ENST00000542896 IL36GQ9NZH8 169 aa20.37■□□□□ 0.85
PDCD2-209ENST00000542896 PSORS1C1Q9UIG5 152 aa20.37■□□□□ 0.85
PDCD2-209ENST00000542896 IGHV3-43A0A0B4J1X8 118 aa20.36■□□□□ 0.85
PDCD2-209ENST00000542896 GEMIN2O14893 280 aaKnown RBP20.36■□□□□ 0.85
PDCD2-209ENST00000542896 MOSP00540 346 aa20.36■□□□□ 0.85
PDCD2-209ENST00000542896 IGHV3-43DP0DP04 118 aa20.36■□□□□ 0.85
PDCD2-209ENST00000542896 SERPINA2P20848 420 aa20.36■□□□□ 0.85
PDCD2-209ENST00000542896 ZNF93P35789 620 aaPredicted RBP20.36■□□□□ 0.85
PDCD2-209ENST00000542896 PPP3R1P63098 170 aa20.36■□□□□ 0.85
PDCD2-209ENST00000542896 DDI2Q5TDH0 399 aa20.36■□□□□ 0.85
PDCD2-209ENST00000542896 LINC00596Q86U02 117 aa20.36■□□□□ 0.85
PDCD2-209ENST00000542896 C8orf31Q8N9H6 132 aa20.36■□□□□ 0.85
PDCD2-209ENST00000542896 RTN4IP1Q8WWV3 396 aaPredicted RBP20.36■□□□□ 0.85
PDCD2-209ENST00000542896 GGHQ92820 318 aa20.36■□□□□ 0.85
PDCD2-209ENST00000542896 S1PR3Q99500 378 aa20.36■□□□□ 0.85
PDCD2-209ENST00000542896 SCN3BQ9NY72 215 aa20.36■□□□□ 0.85
PDCD2-209ENST00000542896 ORC5O43913 435 aa20.35■□□□□ 0.85
PDCD2-209ENST00000542896 TMEM106AQ96A25 262 aa20.35■□□□□ 0.85
PDCD2-209ENST00000542896 TMEM138Q9NPI0 162 aa20.35■□□□□ 0.85
PDCD2-209ENST00000542896 FKBP14Q9NWM8 211 aa20.35■□□□□ 0.85
PDCD2-209ENST00000542896 PAK1IP1Q9NWT1 392 aaPredicted RBP20.35■□□□□ 0.85
PDCD2-209ENST00000542896 LSM4Q9Y4Z0 139 aaKnown RBP20.35■□□□□ 0.85
PDCD2-209ENST00000542896 VDAC1P21796 283 aa20.34■□□□□ 0.85
PDCD2-209ENST00000542896 DCKP27707 260 aa20.34■□□□□ 0.85
PDCD2-209ENST00000542896 ECI1P42126 302 aa20.34■□□□□ 0.85
PDCD2-209ENST00000542896 MPV17LQ2QL34 196 aa20.34■□□□□ 0.85
PDCD2-209ENST00000542896 RBM48Q5RL73 367 aaKnown RBP20.34■□□□□ 0.85
PDCD2-209ENST00000542896 FAM53AQ6NSI3 398 aaPredicted RBP20.34■□□□□ 0.85
PDCD2-209ENST00000542896 RNF152Q8N8N0 203 aa20.34■□□□□ 0.85
PDCD2-209ENST00000542896 TMEM104Q8NE00 496 aa20.34■□□□□ 0.85
PDCD2-209ENST00000542896 OR8H1Q8NGG4 311 aa20.34■□□□□ 0.85
PDCD2-209ENST00000542896 ST6GALNAC6Q969X2 333 aa20.34■□□□□ 0.85
PDCD2-209ENST00000542896 PLSCR3Q9NRY6 295 aa20.34■□□□□ 0.85
PDCD2-209ENST00000542896 DIMT1Q9UNQ2 313 aaKnown RBP20.34■□□□□ 0.85
PDCD2-209ENST00000542896 TPRKBQ9Y3C4 175 aa20.34■□□□□ 0.85
PDCD2-209ENST00000542896 ZNF736B4DX44 427 aaPredicted RBP20.33■□□□□ 0.85
PDCD2-209ENST00000542896 SEC14L6B5MCN3 397 aa20.33■□□□□ 0.85
PDCD2-209ENST00000542896 AIPO00170 330 aa20.33■□□□□ 0.85
PDCD2-209ENST00000542896 RPL22L1Q6P5R6 122 aaKnown RBP20.33■□□□□ 0.85
PDCD2-209ENST00000542896 AHSA2Q719I0 299 aa20.33■□□□□ 0.85
PDCD2-209ENST00000542896 STX19Q8N4C7 294 aa20.33■□□□□ 0.85
PDCD2-209ENST00000542896 TMEM80Q96HE8 168 aa20.33■□□□□ 0.85
PDCD2-209ENST00000542896 HSPB9Q9BQS6 159 aa20.33■□□□□ 0.85
PDCD2-209ENST00000542896 SIRT4Q9Y6E7 314 aaPredicted RBP20.33■□□□□ 0.85
PDCD2-209ENST00000542896 TXNL1O43396 289 aa20.32■□□□□ 0.84
PDCD2-209ENST00000542896 ZNF780AO75290 641 aaPredicted RBP20.32■□□□□ 0.84
PDCD2-209ENST00000542896 MT-ND4P03905 459 aa20.32■□□□□ 0.84
PDCD2-209ENST00000542896 CRHBPP24387 322 aa20.32■□□□□ 0.84
PDCD2-209ENST00000542896 BDKRB2P30411 391 aa20.32■□□□□ 0.84
PDCD2-209ENST00000542896 SOX6P35712 828 aa20.32■□□□□ 0.84
PDCD2-209ENST00000542896 ST3GAL4Q11206 333 aa20.32■□□□□ 0.84
PDCD2-209ENST00000542896 Q3ZCU0 254 aa20.32■□□□□ 0.84
PDCD2-209ENST00000542896 CCDC58Q4VC31 144 aa20.32■□□□□ 0.84
PDCD2-209ENST00000542896 XAF1Q6GPH4 301 aa20.32■□□□□ 0.84
PDCD2-209ENST00000542896 YTHDF1Q9BYJ9 559 aaKnown RBP20.32■□□□□ 0.84
PDCD2-209ENST00000542896 BLOC1S6Q9UL45 172 aa20.32■□□□□ 0.84
PDCD2-209ENST00000542896 SLC31A2O15432 143 aa20.31■□□□□ 0.84
PDCD2-209ENST00000542896 IGHG4P01861 327 aa20.31■□□□□ 0.84
PDCD2-209ENST00000542896 LIMS3P0CW19 117 aa20.31■□□□□ 0.84
PDCD2-209ENST00000542896 LIMS4P0CW20 117 aa20.31■□□□□ 0.84
PDCD2-209ENST00000542896 GTF2F2P13984 249 aa20.31■□□□□ 0.84
PDCD2-209ENST00000542896 SLC22A6Q4U2R8 563 aa20.31■□□□□ 0.84
PDCD2-209ENST00000542896 ZNF497Q6ZNH5 498 aa20.31■□□□□ 0.84
PDCD2-209ENST00000542896 C4orf3Q8WVX3 66 aa20.31■□□□□ 0.84
PDCD2-209ENST00000542896 RAB9BQ9NP90 201 aa20.31■□□□□ 0.84
PDCD2-209ENST00000542896 GNG12Q9UBI6 72 aa20.31■□□□□ 0.84
PDCD2-209ENST00000542896 TRAPPC2LQ9UL33 140 aa20.31■□□□□ 0.84
PDCD2-209ENST00000542896 EXOSC1Q9Y3B2 195 aaKnown RBP20.31■□□□□ 0.84
PDCD2-209ENST00000542896 A0A1W2PP11 408 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms