RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 ZFP57Q9NU63 452 aa8.66□□□□□ -1.02
TOP3A-208ENST00000542570 OPN4Q9UHM6 478 aa8.66□□□□□ -1.02
TOP3A-208ENST00000542570 ZNF462Q96JM2 2506 aa8.66□□□□□ -1.02
TOP3A-208ENST00000542570 IGHV3-21A0A0B4J1V1 117 aa8.66□□□□□ -1.02
TOP3A-208ENST00000542570 RPL36A-HNRNPH2H7BZ11 118 aa8.66□□□□□ -1.02
TOP3A-208ENST00000542570 F12P00748 615 aaPredicted RBP8.66□□□□□ -1.02
TOP3A-208ENST00000542570 CD1AP06126 327 aa8.66□□□□□ -1.02
TOP3A-208ENST00000542570 TRAPPC2P0DI81 140 aa8.66□□□□□ -1.02
TOP3A-208ENST00000542570 TRAPPC2BP0DI82 140 aa8.66□□□□□ -1.02
TOP3A-208ENST00000542570 ASPHD2Q6ICH7 369 aa8.66□□□□□ -1.02
TOP3A-208ENST00000542570 EDARADDQ8WWZ3 215 aa8.66□□□□□ -1.02
TOP3A-208ENST00000542570 HS3ST6Q96QI5 342 aa8.66□□□□□ -1.02
TOP3A-208ENST00000542570 RAB9BQ9NP90 201 aa8.66□□□□□ -1.02
TOP3A-208ENST00000542570 PSENENQ9NZ42 101 aa8.66□□□□□ -1.02
TOP3A-208ENST00000542570 MLXQ9UH92 298 aa8.66□□□□□ -1.02
TOP3A-208ENST00000542570 SIGLEC5O15389 551 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 APOA2P02652 100 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 H2BFSP57053 126 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 SCAND1P57086 179 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 CLEC12BQ2HXU8 276 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 LGALSLQ3ZCW2 172 aaPredicted RBP8.65□□□□□ -1.02
TOP3A-208ENST00000542570 PIP4P1Q86T03 277 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 DOLPP1Q86YN1 238 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 SLC38A6Q8IZM9 456 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 VKORC1L1Q8N0U8 176 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 ZDHHC22Q8N966 263 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 FAM57AQ8TBR7 257 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 STARD4Q96DR4 205 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 CNTNAP3BQ96NU0 1288 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 PCGF1Q9BSM1 259 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 HIPK2Q9H2X6 1198 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 IGKV1-27A0A075B6S5 117 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 MPTX1A8MV57 137 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 TXNL1O43396 289 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 HBZP02008 142 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 CD40P25942 277 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 AKR1C3P42330 323 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 KLRB1Q12918 225 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 RPL7L1Q6DKI1 246 aaKnown RBP8.65□□□□□ -1.02
TOP3A-208ENST00000542570 FAM216BQ8N7L0 139 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 COMMD5Q9GZQ3 224 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 MS4A5Q9H3V2 200 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 RPS10P5Q9NQ39 176 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 DENND4AQ7Z401 1863 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 IGHV3OR16-10A0A075B7F0 116 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 hCG_1809904A0A1W2PP81 198 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 A0A1W2PPE2 198 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 A0A1W2PR64 198 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 A0A1W2PRV1 198 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 SRPXP78539 464 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 MRPS11P82912 194 aaKnown RBP8.65□□□□□ -1.02
TOP3A-208ENST00000542570 TOR2AQ5JU69 321 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 BAP18Q8IXM2 172 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 ST8SIA2Q92186 375 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 AQP3Q92482 292 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 LINC00470Q9BZP3 86 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 SHARPINQ9H0F6 387 aa8.65□□□□□ -1.02
TOP3A-208ENST00000542570 COL4A4P53420 1690 aaPredicted RBP8.65□□□□□ -1.03
TOP3A-208ENST00000542570 CDRT15L2A8MXV6 281 aa8.65□□□□□ -1.03
TOP3A-208ENST00000542570 CHST1O43916 411 aa8.65□□□□□ -1.03
TOP3A-208ENST00000542570 CHATP28329 748 aa8.65□□□□□ -1.03
TOP3A-208ENST00000542570 SSBP1Q04837 148 aaKnown RBP8.65□□□□□ -1.03
TOP3A-208ENST00000542570 TCTE3Q8IZS6 198 aa8.65□□□□□ -1.03
TOP3A-208ENST00000542570 TMEM45BQ96B21 275 aa8.65□□□□□ -1.03
TOP3A-208ENST00000542570 C10orf35Q96D05 121 aa8.65□□□□□ -1.03
TOP3A-208ENST00000542570 ACY3Q96HD9 319 aa8.65□□□□□ -1.03
TOP3A-208ENST00000542570 PNRC2Q9NPJ4 139 aaKnown RBP8.65□□□□□ -1.03
TOP3A-208ENST00000542570 SIRT7Q9NRC8 400 aa8.65□□□□□ -1.03
TOP3A-208ENST00000542570 SLC39A9Q9NUM3 307 aa8.65□□□□□ -1.03
TOP3A-208ENST00000542570 LIN7CQ9NUP9 197 aaKnown RBP8.65□□□□□ -1.03
TOP3A-208ENST00000542570 PRELID1Q9Y255 219 aa8.65□□□□□ -1.03
TOP3A-208ENST00000542570 A0A0A6YYD4 124 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 TOX4O94842 621 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 SCAF4O95104 1147 aaKnown RBP8.64□□□□□ -1.03
TOP3A-208ENST00000542570 IGHV3-48P01763 117 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 SULT1A3P0DMM9 295 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 SULT1A4P0DMN0 295 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 DBX2Q6ZNG2 339 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 SLC25A42Q86VD7 318 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 RBMXL3Q8N7X1 1067 aaKnown RBP8.64□□□□□ -1.03
TOP3A-208ENST00000542570 PXT1Q8NFP0 134 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 OR5C1Q8NGR4 320 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 OR5P3Q8WZ94 311 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 NEUROG1Q92886 237 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 C5orf66Q9H5L9 145 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 HILPDAQ9Y5L2 63 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 MAP1AP78559 2803 aaPredicted RBP8.64□□□□□ -1.03
TOP3A-208ENST00000542570 NAV3Q8IVL0 2385 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 PPIAL4EA0A075B759 164 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 TRAV38-1A0A0B4J264 116 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 PPIAL4DF5H284 164 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 PPIAL4FP0DN26 164 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 ANKRD55Q3KP44 614 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 Q6ZRG5 221 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 OR5M8Q8NGP6 311 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 OR1S2Q8NGQ3 325 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 PBDC1Q9BVG4 233 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 C1QTNF5Q9BXJ0 243 aa8.64□□□□□ -1.03
TOP3A-208ENST00000542570 FAM212BQ9NTI7 297 aaPredicted RBP8.64□□□□□ -1.03
TOP3A-208ENST00000542570 PPIAL4AQ9Y536 164 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms