RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 CTLA4P16410 223 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 SRMP19623 302 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 SPRR2EP22531 72 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 NFYBP25208 207 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 EPHA2P29317 976 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 SPRR2BP35325 72 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 SPRR2AP35326 72 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 CHI3L1P36222 383 aaPredicted RBP1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR3A3P47888 321 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 ATP5G3P48201 142 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 HOXA1P49639 335 aaPredicted RBP1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 DAP3P51398 398 aaKnown RBP1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 ATP1B3P54709 279 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 UBE2KP61086 200 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 HPCAP84074 193 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 ZNF92Q03936 586 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 ATP5G2Q06055 141 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 AQP6Q13520 282 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 SNCBQ16143 134 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 CCDC92Q53HC0 331 aaPredicted RBP1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 MRPL2Q5T653 305 aaKnown RBP1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 METTL2BQ6P1Q9 378 aaKnown RBP1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 ZNF562Q6V9R5 426 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 HIST3H2AQ7L7L0 130 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 GOLGA7Q7Z5G4 137 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 HMGN2P46Q86SG4 172 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 SMIM29Q86T20 159 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 SERPINA11Q86U17 422 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 CCDC28AQ8IWP9 274 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR8H2Q8N162 312 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 FTMTQ8N4E7 242 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 C10orf126Q8N4M7 172 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 MS4A15Q8N5U1 240 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 ANKRD42Q8N9B4 389 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 TMEM104Q8NE00 496 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR56B2PQ8NGI1 322 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 RXFP4Q8TDU9 374 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 C7orf33Q8WU49 177 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 GIMAP1Q8WWP7 306 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 NPIPB3Q92617 1050 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 FCGR1BQ92637 280 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 HIST1H2ACQ93077 130 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 MOAP1Q96BY2 351 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 ROPN1LQ96C74 230 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 PPCDCQ96CD2 204 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 PKNOX2Q96KN3 472 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 TXN2Q99757 166 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 COQ7Q99807 217 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 FUT8Q9BYC5 575 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 NUF2Q9BZD4 464 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 HDHD2Q9H0R4 259 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 DPH5Q9H2P9 285 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 GOLPH3LQ9H4A5 285 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 MTHFD2LQ9H903 347 aaPredicted RBP1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 POPDC3Q9HBV1 291 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 POLE4Q9NR33 117 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 TAB2Q9NYJ8 693 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 TAS2R5Q9NYW4 299 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR14J1Q9UGF5 321 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 SLC7A11Q9UPY5 501 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 BZW2Q9Y6E2 419 aaKnown RBP1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 OBSCNQ5VST9 7968 aa1.3□□□□□ -2.2
TRAV1-1-201ENST00000542354 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 IGKV1D-43A0A0B4J1Z2 117 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 FUOMA2VDF0 154 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 CBY3A6NI87 242 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 SMIM23A6NLE4 172 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 SYCE1LA8MT33 242 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 RER1O15258 196 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 NBR2O15453 112 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 DFFBO76075 338 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 OR5F1O95221 314 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 HLA-AP01891 365 aaKnown RBP1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 KRT6AP02538 564 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 KRT6BP04259 564 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 DBIP07108 87 aaKnown RBP1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 FAM228BP0C875 321 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 DEFB130BP0DP73 79 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 DEFB130AP0DP74 79 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 NR2F1P10589 423 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 GFAPP14136 432 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 ZNF44P15621 663 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 ZNF3P17036 446 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 C4BPBP20851 252 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 GALP22466 123 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 HTR2AP28223 471 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 FRKP42685 505 aaPredicted RBP1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 GLP1RP43220 463 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 LGALS7P47929 136 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 KRT6CP48668 564 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 SLC7A2P52569 658 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 CRISP1P54107 249 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 NUTF2P61970 127 aaKnown RBP1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 PAFAH1B2P68402 229 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 BASP1P80723 227 aaKnown RBP1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 NDPQ00604 133 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 UBXN1Q04323 297 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 FMODQ06828 376 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 SS18Q15532 418 aa1.29□□□□□ -2.2
TRAV1-1-201ENST00000542354 ATP6AP1Q15904 470 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms