RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 INSIG2Q9Y5U4 225 aa4.42□□□□□ -1.7
CPSF7-220ENST00000541963 MAP1AP78559 2803 aaPredicted RBP4.42□□□□□ -1.7
CPSF7-220ENST00000541963 TEP1Q99973 2627 aaKnown RBP4.42□□□□□ -1.7
CPSF7-220ENST00000541963 MALRD1Q5VYJ5 2156 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 KIR2DS1A0A191URI9 304 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 A0A1B0GW55 424 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 A0A1W2PPI3 338 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 A0A1W2PQL4 384 aaPredicted RBP4.41□□□□□ -1.7
CPSF7-220ENST00000541963 IRGMA1A4Y4 181 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 NKX6-3A6NJ46 265 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 DHRS7CA6NNS2 312 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 ZNF732B4DXR9 585 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 TRAPPC2LH3BP13 241 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 M0R129 80 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 DLGAP1O14490 977 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 SYT7O43581 403 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 NDUFB3O43676 98 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 ENSAO43768 121 aaKnown RBP4.41□□□□□ -1.7
CPSF7-220ENST00000541963 ENTPD6O75354 484 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 GATBO75879 557 aaKnown RBP4.41□□□□□ -1.7
CPSF7-220ENST00000541963 FADS2O95864 444 aaKnown RBP4.41□□□□□ -1.7
CPSF7-220ENST00000541963 GYPAP02724 150 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 TTRP02766 147 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 DUX4L2P0CJ85 424 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 DUX4L3P0CJ86 424 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 DUX4L4P0CJ87 422 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 DUX4L5P0CJ88 424 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 DUX4L6P0CJ89 424 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 DUX4L7P0CJ90 424 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 ADRA2CP18825 462 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 GLRA1P23415 457 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 ACKR3P25106 362 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 CD80P33681 288 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 BPIFB3P59826 476 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 B2MP61769 119 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 ACTA2P62736 377 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 ACTG2P63267 376 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 RPL24P83731 157 aaKnown RBP4.41□□□□□ -1.7
CPSF7-220ENST00000541963 PAX8Q06710 450 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 MRPL28Q13084 256 aaKnown RBP4.41□□□□□ -1.7
CPSF7-220ENST00000541963 ZNF273Q14593 569 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 KLHL22Q53GT1 634 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 LRRC10Q5BKY1 277 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 FAM76BQ5HYJ3 339 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 FAM201AQ5SY85 155 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 CLVS2Q5SYC1 327 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 TMEM244Q5VVB8 128 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 PLCXD3Q63HM9 321 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 WDR25Q64LD2 544 aaPredicted RBP4.41□□□□□ -1.7
CPSF7-220ENST00000541963 PRR27Q6MZM9 219 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 CCBE1Q6UXH8 406 aaPredicted RBP4.41□□□□□ -1.7
CPSF7-220ENST00000541963 ZNF826PQ6ZT77 177 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 ZNF573Q86YE8 665 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 C11orf53Q8IXP5 236 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 ACBD7Q8N6N7 88 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 HAVCR2Q8TDQ0 301 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 C10orf35Q96D05 121 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 HYLS1Q96M11 299 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 TTTY10Q9BZA0 68 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 SLIRPQ9GZT3 109 aaKnown RBP4.41□□□□□ -1.7
CPSF7-220ENST00000541963 DNTTIP1Q9H147 329 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 TLNRD1Q9H1K6 362 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 PPA2Q9H2U2 334 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 PLEKHA1Q9HB21 404 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 C12orf4Q9NQ89 552 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 MMP26Q9NRE1 261 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 INPP5EQ9NRR6 644 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 RASL12Q9NYN1 266 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 KAAG1Q9UBP8 84 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 DUX4Q9UBX2 424 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 MRM2Q9UI43 246 aaKnown RBP4.41□□□□□ -1.7
CPSF7-220ENST00000541963 GNG8Q9UK08 70 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 SLC22A13Q9Y226 551 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 POLDIP2Q9Y2S7 368 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 CSPG4Q6UVK1 2322 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 C2CD3Q4AC94 2353 aa4.41□□□□□ -1.7
CPSF7-220ENST00000541963 IGHV2-70DA0A0C4DH43 119 aa4.4□□□□□ -1.71
CPSF7-220ENST00000541963 TEX13DA0A0J9YY54 714 aaPredicted RBP4.4□□□□□ -1.71
CPSF7-220ENST00000541963 A0A1W2PPQ1 181 aa4.4□□□□□ -1.71
CPSF7-220ENST00000541963 LINC00862A6NCI5 91 aa4.4□□□□□ -1.71
CPSF7-220ENST00000541963 SRRM5B3KS81 715 aa4.4□□□□□ -1.71
CPSF7-220ENST00000541963 PRAC2D3DTV9 90 aa4.4□□□□□ -1.71
CPSF7-220ENST00000541963 SLC1A7O00341 560 aa4.4□□□□□ -1.71
CPSF7-220ENST00000541963 P2RY10O00398 339 aa4.4□□□□□ -1.71
CPSF7-220ENST00000541963 MAGEB4O15481 346 aaPredicted RBP4.4□□□□□ -1.71
CPSF7-220ENST00000541963 SRSF10O75494 262 aaKnown RBP4.4□□□□□ -1.71
CPSF7-220ENST00000541963 CYB5AP00167 134 aa4.4□□□□□ -1.71
CPSF7-220ENST00000541963 IGLV3-1P01715 115 aa4.4□□□□□ -1.71
CPSF7-220ENST00000541963 C1QBP02746 253 aa4.4□□□□□ -1.71
CPSF7-220ENST00000541963 S100A6P06703 90 aa4.4□□□□□ -1.71
CPSF7-220ENST00000541963 HTR1AP08908 422 aa4.4□□□□□ -1.71
CPSF7-220ENST00000541963 UBCP0CG48 685 aaKnown RBP4.4□□□□□ -1.71
CPSF7-220ENST00000541963 GPM6AP51674 278 aa4.4□□□□□ -1.71
CPSF7-220ENST00000541963 GBX2P52951 348 aaPredicted RBP4.4□□□□□ -1.71
CPSF7-220ENST00000541963 CX3CL1P78423 397 aa4.4□□□□□ -1.71
CPSF7-220ENST00000541963 ZNF85Q03923 595 aa4.4□□□□□ -1.71
CPSF7-220ENST00000541963 MFGE8Q08431 387 aaPredicted RBP4.4□□□□□ -1.71
CPSF7-220ENST00000541963 RAB40BQ12829 278 aa4.4□□□□□ -1.71
CPSF7-220ENST00000541963 ATAD3CQ5T2N8 411 aa4.4□□□□□ -1.71
CPSF7-220ENST00000541963 UBE2UQ5VVX9 321 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms