RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 CRYBB2P43320 205 aa9.4□□□□□ -0.9
GABRB3-204ENST00000541819 AESQ08117 197 aa9.4□□□□□ -0.9
GABRB3-204ENST00000541819 SIRT7Q9NRC8 400 aa9.4□□□□□ -0.9
GABRB3-204ENST00000541819 RGPD5Q99666 1765 aa9.4□□□□□ -0.9
GABRB3-204ENST00000541819 HMSDA8MTL9 139 aa9.4□□□□□ -0.9
GABRB3-204ENST00000541819 RPL27AP46776 148 aaKnown RBP9.4□□□□□ -0.9
GABRB3-204ENST00000541819 EWSR1Q01844 656 aaKnown RBP eCLIP9.4□□□□□ -0.9
GABRB3-204ENST00000541819 MDP1Q86V88 176 aa9.4□□□□□ -0.9
GABRB3-204ENST00000541819 OR2V2Q96R30 315 aa9.4□□□□□ -0.9
GABRB3-204ENST00000541819 CDX2Q99626 313 aaPredicted RBP9.4□□□□□ -0.9
GABRB3-204ENST00000541819 CTXND1A0A1B0GTU2 59 aa9.4□□□□□ -0.9
GABRB3-204ENST00000541819 SH2D5Q6ZV89 423 aa9.4□□□□□ -0.9
GABRB3-204ENST00000541819 ARL6IP6Q8N6S5 226 aa9.4□□□□□ -0.9
GABRB3-204ENST00000541819 TMEM204Q9BSN7 226 aa9.4□□□□□ -0.9
GABRB3-204ENST00000541819 MRPL13Q9BYD1 178 aaKnown RBP9.4□□□□□ -0.9
GABRB3-204ENST00000541819 METTL1Q9UBP6 276 aaKnown RBP9.4□□□□□ -0.9
GABRB3-204ENST00000541819 YBX2Q9Y2T7 364 aaKnown RBP9.4□□□□□ -0.9
GABRB3-204ENST00000541819 TOPAZ1Q8N9V7 1692 aa9.4□□□□□ -0.9
GABRB3-204ENST00000541819 ADAP1O75689 374 aa9.4□□□□□ -0.91
GABRB3-204ENST00000541819 HPRT1P00492 218 aa9.4□□□□□ -0.91
GABRB3-204ENST00000541819 ACAA1P09110 424 aaPredicted RBP9.4□□□□□ -0.91
GABRB3-204ENST00000541819 LINC01555Q8NAE3 123 aa9.4□□□□□ -0.91
GABRB3-204ENST00000541819 ABHD14BQ96IU4 210 aa9.4□□□□□ -0.91
GABRB3-204ENST00000541819 GPA33Q99795 319 aa9.4□□□□□ -0.91
GABRB3-204ENST00000541819 CT62P0C5K7 136 aa9.4□□□□□ -0.91
GABRB3-204ENST00000541819 PSG2P11465 335 aa9.4□□□□□ -0.91
GABRB3-204ENST00000541819 KLF9Q13886 244 aaPredicted RBP9.4□□□□□ -0.91
GABRB3-204ENST00000541819 DNLZQ5SXM8 178 aa9.4□□□□□ -0.91
GABRB3-204ENST00000541819 MRM2Q9UI43 246 aaKnown RBP9.4□□□□□ -0.91
GABRB3-204ENST00000541819 NRXN3Q9Y4C0 1643 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 PHIPQ8WWQ0 1821 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 IFNL4K9M1U5 179 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 SOCS1O15524 211 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 ITGBL1O95965 494 aaPredicted RBP9.39□□□□□ -0.91
GABRB3-204ENST00000541819 NUDT3O95989 172 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 TCTAP57738 103 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 KRTCAP3Q53RY4 240 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 MESTQ5EB52 335 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 DCTN5Q9BTE1 182 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 COL25A1Q9BXS0 654 aaPredicted RBP9.39□□□□□ -0.91
GABRB3-204ENST00000541819 PRR13Q9NZ81 148 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 ZNF815PA8K554 130 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 CISD3P0C7P0 127 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 CCL4P13236 92 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 CTGFP29279 349 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 TSPOP30536 169 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 PRDX2P32119 198 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 INSL4Q14641 139 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 UNQ5815/PRO19632Q6UWF5 114 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 CD300LDQ6UXZ3 194 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 IL19Q9UHD0 177 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 LOC107984156A0A0G2JMH3 177 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 A0A1W2PPE3 182 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 RBFOX2O43251 390 aaKnown RBP eCLIP9.39□□□□□ -0.91
GABRB3-204ENST00000541819 KBTBD11O94819 623 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 S1PR2O95136 353 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 CLDN14O95500 239 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 MC5RP33032 325 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 TMEM50BP56557 158 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 GAB4Q2WGN9 574 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 ARL17AQ8IVW1 177 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 GCSAMQ8N6F7 178 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.39□□□□□ -0.91
GABRB3-204ENST00000541819 CEACAM18A8MTB9 384 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 EDIL3O43854 480 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 PSG9Q00887 426 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 JOSD1Q15040 202 aaPredicted RBP9.39□□□□□ -0.91
GABRB3-204ENST00000541819 LHX8Q68G74 356 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 ZNF880Q6PDB4 577 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 AMER3Q8N944 861 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 BVESQ8NE79 360 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 OR4B1Q8NGF8 309 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 ADAMTS17Q8TE56 1095 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 PITPNC1Q9UKF7 332 aa9.39□□□□□ -0.91
GABRB3-204ENST00000541819 CHD2O14647 1828 aaKnown RBP9.39□□□□□ -0.91
GABRB3-204ENST00000541819 IGHV5-10-1A0A0J9YXX1 117 aa9.38□□□□□ -0.91
GABRB3-204ENST00000541819 CBLN3Q6UW01 205 aa9.38□□□□□ -0.91
GABRB3-204ENST00000541819 WDR34Q96EX3 536 aa9.38□□□□□ -0.91
GABRB3-204ENST00000541819 SNX22Q96L94 193 aa9.38□□□□□ -0.91
GABRB3-204ENST00000541819 TTTY12Q9BZ98 90 aa9.38□□□□□ -0.91
GABRB3-204ENST00000541819 PHLDA3Q9Y5J5 127 aa9.38□□□□□ -0.91
GABRB3-204ENST00000541819 LAMB4A4D0S4 1761 aa9.38□□□□□ -0.91
GABRB3-204ENST00000541819 TMEM262E9PQX1 116 aa9.38□□□□□ -0.91
GABRB3-204ENST00000541819 CTDSPLO15194 276 aa9.38□□□□□ -0.91
GABRB3-204ENST00000541819 CCL3P10147 92 aa9.38□□□□□ -0.91
GABRB3-204ENST00000541819 ZNF25P17030 456 aaPredicted RBP9.38□□□□□ -0.91
GABRB3-204ENST00000541819 PIGYQ3MUY2 71 aa9.38□□□□□ -0.91
GABRB3-204ENST00000541819 DCAF10Q5QP82 559 aa9.38□□□□□ -0.91
GABRB3-204ENST00000541819 ERASQ7Z444 233 aa9.38□□□□□ -0.91
GABRB3-204ENST00000541819 POM121Q96HA1 1249 aa9.38□□□□□ -0.91
GABRB3-204ENST00000541819 GUCD1Q96NT3 240 aa9.38□□□□□ -0.91
GABRB3-204ENST00000541819 RPP25Q9BUL9 199 aaKnown RBP9.38□□□□□ -0.91
GABRB3-204ENST00000541819 TMEFF2Q9UIK5 374 aaPredicted RBP9.38□□□□□ -0.91
GABRB3-204ENST00000541819 NEU3Q9UQ49 428 aa9.38□□□□□ -0.91
GABRB3-204ENST00000541819 A0A087X0M5 115 aa9.38□□□□□ -0.91
GABRB3-204ENST00000541819 A0A1B0GX30 115 aa9.38□□□□□ -0.91
GABRB3-204ENST00000541819 IGFBP6P24592 240 aaPredicted RBP9.38□□□□□ -0.91
GABRB3-204ENST00000541819 GALNT14Q96FL9 552 aa9.38□□□□□ -0.91
GABRB3-204ENST00000541819 NKX2-6A6NCS4 301 aa9.38□□□□□ -0.91
GABRB3-204ENST00000541819 NPFFO15130 113 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms