RNA–Protein interactions for RNA: ENST00000541386.5

RAP1B-225, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-225	ENST00000541386	ZNF439	Q8NDP4	499 aa		13.74	□□□□□ -0.21
RAP1B-225	ENST00000541386	PXT1	Q8NFP0	134 aa		13.74	□□□□□ -0.21
RAP1B-225	ENST00000541386	CCDC107	Q8WV48	283 aa		13.74	□□□□□ -0.21
RAP1B-225	ENST00000541386	EME1	Q96AY2	570 aa		13.74	□□□□□ -0.21
RAP1B-225	ENST00000541386	NSL1	Q96IY1	281 aa		13.74	□□□□□ -0.21
RAP1B-225	ENST00000541386	MRPS28	Q9Y2Q9	187 aa	Known RBP	13.74	□□□□□ -0.21
RAP1B-225	ENST00000541386	SULT1B1	O43704	296 aa		13.73	□□□□□ -0.21
RAP1B-225	ENST00000541386	IGLV1-51	P01701	117 aa		13.73	□□□□□ -0.21
RAP1B-225	ENST00000541386	HLA-DRB1	P01911	266 aa		13.73	□□□□□ -0.21
RAP1B-225	ENST00000541386	ARSB	P15848	533 aa		13.73	□□□□□ -0.21
RAP1B-225	ENST00000541386	HOXB6	P17509	224 aa	Known RBP	13.73	□□□□□ -0.21
RAP1B-225	ENST00000541386	BLVRB	P30043	206 aa	Predicted RBP	13.73	□□□□□ -0.21
RAP1B-225	ENST00000541386	LSAMP	Q13449	338 aa		13.73	□□□□□ -0.21
RAP1B-225	ENST00000541386	C19orf54	Q5BKX5	351 aa		13.73	□□□□□ -0.21
RAP1B-225	ENST00000541386	CT45A1	Q5HYN5	189 aa		13.73	□□□□□ -0.21
RAP1B-225	ENST00000541386	CT45A3	Q8NHU0	189 aa		13.73	□□□□□ -0.21
RAP1B-225	ENST00000541386	ANKRD60	Q9BZ19	345 aa		13.73	□□□□□ -0.21
RAP1B-225	ENST00000541386	TMEM30CP	A0ZSE6	113 aa		13.72	□□□□□ -0.21
RAP1B-225	ENST00000541386	OR4C45	A6NMZ5	311 aa		13.72	□□□□□ -0.21
RAP1B-225	ENST00000541386	ORC5	O43913	435 aa		13.72	□□□□□ -0.21
RAP1B-225	ENST00000541386	HTR1A	P08908	422 aa		13.72	□□□□□ -0.21
RAP1B-225	ENST00000541386	CCR9	P51686	369 aa		13.72	□□□□□ -0.21
RAP1B-225	ENST00000541386	LPCAT4	Q643R3	524 aa		13.72	□□□□□ -0.21
RAP1B-225	ENST00000541386	IL17D	Q8TAD2	202 aa		13.72	□□□□□ -0.21
RAP1B-225	ENST00000541386	RETN	Q9HD89	108 aa		13.72	□□□□□ -0.21
RAP1B-225	ENST00000541386	FBXO7	Q9Y3I1	522 aa		13.72	□□□□□ -0.21
RAP1B-225	ENST00000541386	GABRP	O00591	440 aa		13.71	□□□□□ -0.21
RAP1B-225	ENST00000541386	HTR3B	O95264	441 aa		13.71	□□□□□ -0.21
RAP1B-225	ENST00000541386	IGHV3-11	P01762	117 aa		13.71	□□□□□ -0.21
RAP1B-225	ENST00000541386	HSPB1	P04792	205 aa	Known RBP	13.71	□□□□□ -0.21
RAP1B-225	ENST00000541386	ACTB	P60709	375 aa		13.71	□□□□□ -0.21
RAP1B-225	ENST00000541386		Q3ZCU0	254 aa		13.71	□□□□□ -0.21
RAP1B-225	ENST00000541386	KCTD20	Q7Z5Y7	419 aa		13.71	□□□□□ -0.21
RAP1B-225	ENST00000541386	SERPINA12	Q8IW75	414 aa		13.71	□□□□□ -0.21
RAP1B-225	ENST00000541386	OR5D14	Q8NGL3	314 aa		13.71	□□□□□ -0.21
RAP1B-225	ENST00000541386	TNFAIP8L1	Q8WVP5	186 aa		13.71	□□□□□ -0.21
RAP1B-225	ENST00000541386	RSRP1	Q9BUV0	290 aa		13.71	□□□□□ -0.21
RAP1B-225	ENST00000541386	STUB1	Q9UNE7	303 aa		13.71	□□□□□ -0.21
RAP1B-225	ENST00000541386		A0A1W2PN81	502 aa		13.7	□□□□□ -0.22
RAP1B-225	ENST00000541386	T-ENOL	P0DO92	83 aa		13.7	□□□□□ -0.22
RAP1B-225	ENST00000541386	CHRNA7	P36544	502 aa		13.7	□□□□□ -0.22
RAP1B-225	ENST00000541386	NDP	Q00604	133 aa		13.7	□□□□□ -0.22
RAP1B-225	ENST00000541386	RSU1	Q15404	277 aa		13.7	□□□□□ -0.22
RAP1B-225	ENST00000541386	ECSCR	Q19T08	205 aa		13.7	□□□□□ -0.22
RAP1B-225	ENST00000541386	LIN54	Q6MZP7	749 aa		13.7	□□□□□ -0.22
RAP1B-225	ENST00000541386	ASCL4	Q6XD76	172 aa		13.7	□□□□□ -0.22
RAP1B-225	ENST00000541386	SATL1	Q86VE3	508 aa		13.7	□□□□□ -0.22
RAP1B-225	ENST00000541386	SPATA24	Q86W54	205 aa		13.7	□□□□□ -0.22
RAP1B-225	ENST00000541386	ANKRD13B	Q86YJ7	626 aa		13.7	□□□□□ -0.22
RAP1B-225	ENST00000541386	OR10V1	Q8NGI7	309 aa		13.7	□□□□□ -0.22
RAP1B-225	ENST00000541386	FLYWCH2	Q96CP2	140 aa	Known RBP	13.7	□□□□□ -0.22
RAP1B-225	ENST00000541386	THTPA	Q9BU02	230 aa		13.7	□□□□□ -0.22
RAP1B-225	ENST00000541386	ELOVL1	Q9BW60	279 aa		13.7	□□□□□ -0.22
RAP1B-225	ENST00000541386	IFT22	Q9H7X7	185 aa		13.7	□□□□□ -0.22
RAP1B-225	ENST00000541386	MED4	Q9NPJ6	270 aa		13.7	□□□□□ -0.22
RAP1B-225	ENST00000541386	ST3GAL6	Q9Y274	331 aa		13.7	□□□□□ -0.22
RAP1B-225	ENST00000541386	HERC2	O95714	4834 aa		13.7	□□□□□ -0.22
RAP1B-225	ENST00000541386	C12orf77	C9JDV5	145 aa		13.69	□□□□□ -0.22
RAP1B-225	ENST00000541386	SLC16A6	O15403	523 aa		13.69	□□□□□ -0.22
RAP1B-225	ENST00000541386	NBR2	O15453	112 aa		13.69	□□□□□ -0.22
RAP1B-225	ENST00000541386	LANCL1	O43813	399 aa		13.69	□□□□□ -0.22
RAP1B-225	ENST00000541386	OR7C1	O76099	320 aa	Predicted RBP	13.69	□□□□□ -0.22
RAP1B-225	ENST00000541386	MT-ND4	P03905	459 aa		13.69	□□□□□ -0.22
RAP1B-225	ENST00000541386	POLR2I	P36954	125 aa	Known RBP	13.69	□□□□□ -0.22
RAP1B-225	ENST00000541386	TMED1	Q13445	227 aa		13.69	□□□□□ -0.22
RAP1B-225	ENST00000541386	ALKBH1	Q13686	389 aa	Known RBP	13.69	□□□□□ -0.22
RAP1B-225	ENST00000541386	C5orf64	Q2M2E5	130 aa		13.69	□□□□□ -0.22
RAP1B-225	ENST00000541386	KDM4D	Q6B0I6	523 aa		13.69	□□□□□ -0.22
RAP1B-225	ENST00000541386	PARP16	Q8N5Y8	322 aa		13.69	□□□□□ -0.22
RAP1B-225	ENST00000541386	PELI1	Q96FA3	418 aa		13.69	□□□□□ -0.22
RAP1B-225	ENST00000541386	GPER1	Q99527	375 aa		13.69	□□□□□ -0.22
RAP1B-225	ENST00000541386	FAM110A	Q9BQ89	295 aa		13.69	□□□□□ -0.22
RAP1B-225	ENST00000541386	ZNF251	Q9BRH9	671 aa		13.69	□□□□□ -0.22
RAP1B-225	ENST00000541386	GNG12	Q9UBI6	72 aa		13.69	□□□□□ -0.22
RAP1B-225	ENST00000541386	FOXA2	Q9Y261	457 aa	Predicted RBP	13.69	□□□□□ -0.22
RAP1B-225	ENST00000541386	TCRBV3S1	A0A5B6	114 aa		13.68	□□□□□ -0.22
RAP1B-225	ENST00000541386	RBMY1B	A6NDE4	496 aa	Known RBP	13.68	□□□□□ -0.22
RAP1B-225	ENST00000541386	RBMY1E	A6NEQ0	496 aa	Known RBP	13.68	□□□□□ -0.22
RAP1B-225	ENST00000541386	GEMIN2	O14893	280 aa	Known RBP	13.68	□□□□□ -0.22
RAP1B-225	ENST00000541386	CDRT1	O95170	752 aa		13.68	□□□□□ -0.22
RAP1B-225	ENST00000541386	RBMY1D	P0C7P1	496 aa	Known RBP	13.68	□□□□□ -0.22
RAP1B-225	ENST00000541386	CRIP2	P52943	208 aa	Predicted RBP	13.68	□□□□□ -0.22
RAP1B-225	ENST00000541386	ZNF497	Q6ZNH5	498 aa		13.68	□□□□□ -0.22
RAP1B-225	ENST00000541386	OR51A2	Q8NGJ7	313 aa		13.68	□□□□□ -0.22
RAP1B-225	ENST00000541386	TMED9	Q9BVK6	235 aa		13.68	□□□□□ -0.22
RAP1B-225	ENST00000541386	FAM192A	Q9GZU8	254 aa		13.68	□□□□□ -0.22
RAP1B-225	ENST00000541386	TUBA4B	Q9H853	241 aa		13.68	□□□□□ -0.22
RAP1B-225	ENST00000541386	NUBP2	Q9Y5Y2	271 aa		13.68	□□□□□ -0.22
RAP1B-225	ENST00000541386	DAPL1	A0PJW8	107 aa		13.67	□□□□□ -0.22
RAP1B-225	ENST00000541386		J3QLW9	94 aa		13.67	□□□□□ -0.22
RAP1B-225	ENST00000541386		J3QRE1	110 aa		13.67	□□□□□ -0.22
RAP1B-225	ENST00000541386	EGR2	P11161	476 aa	Predicted RBP	13.67	□□□□□ -0.22
RAP1B-225	ENST00000541386	ZNF19	P17023	458 aa		13.67	□□□□□ -0.22
RAP1B-225	ENST00000541386	CALB2	P22676	271 aa		13.67	□□□□□ -0.22
RAP1B-225	ENST00000541386	RBM11	P57052	281 aa	Known RBP	13.67	□□□□□ -0.22
RAP1B-225	ENST00000541386	LRRC36	Q1X8D7	754 aa		13.67	□□□□□ -0.22
RAP1B-225	ENST00000541386	NPB	Q8NG41	125 aa		13.67	□□□□□ -0.22
RAP1B-225	ENST00000541386	OR8J1	Q8NGP2	316 aa		13.67	□□□□□ -0.22
RAP1B-225	ENST00000541386	OR52N1	Q8NH53	320 aa		13.67	□□□□□ -0.22
RAP1B-225	ENST00000541386	RHOV	Q96L33	236 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms