RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 MRPS10P82664 201 aaKnown RBP7.68□□□□□ -1.18
DDX55-208ENST00000541259 HMGN3Q15651 99 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 CR1LQ2VPA4 569 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 UTF1Q5T230 341 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 CD276Q5ZPR3 534 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 PRR18Q8N4B5 295 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 BEST4Q8NFU0 473 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 TRIM63Q969Q1 353 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 C1orf159Q96HA4 380 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 WDR12Q9GZL7 423 aaKnown RBP7.68□□□□□ -1.18
DDX55-208ENST00000541259 TAF9BQ9HBM6 251 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 IFT46Q9NQC8 304 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 OR6C3Q9NZP0 311 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 POLR3KQ9Y2Y1 108 aaPredicted RBP7.68□□□□□ -1.18
DDX55-208ENST00000541259 RBMX2Q9Y388 322 aaKnown RBP7.68□□□□□ -1.18
DDX55-208ENST00000541259 LINC00312Q9Y6C7 94 aa7.68□□□□□ -1.18
DDX55-208ENST00000541259 SVEP1Q4LDE5 3571 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 CELSR1Q9NYQ6 3014 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 TLN2Q9Y4G6 2542 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 IGHV3-43A0A0B4J1X8 118 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 IGKV1-6A0A0C4DH72 117 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 TRDCB7Z8K6 153 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 HBZP02008 142 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 PMP2P02689 132 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 HEXAP06865 529 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 IGHV3-43DP0DP04 118 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 IGHV4-31P0DP07 118 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 IL7P13232 177 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 GZMHP20718 246 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 HLA-DMAP28067 261 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 RCVRNP35243 200 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 ARF6P62330 175 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 HLA-DRB3P79483 266 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 IFITM3Q01628 133 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 PRB3Q04118 309 aaPredicted RBP7.67□□□□□ -1.18
DDX55-208ENST00000541259 HERPUD1Q15011 391 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 SRSF7Q16629 238 aaKnown RBP eCLIP7.67□□□□□ -1.18
DDX55-208ENST00000541259 LTC4SQ16873 150 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 TMEM249Q2WGJ8 235 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 IGSF11Q5DX21 431 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 C6orf183Q5T699 404 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 PRAMEF5Q5TYX0 476 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 C11orf42Q8N5U0 333 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 ZNF565Q8N9K5 539 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 ARL11Q969Q4 196 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 MSI2Q96DH6 328 aaKnown RBP7.67□□□□□ -1.18
DDX55-208ENST00000541259 KIRREL1Q96J84 757 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 ZNF714Q96N38 554 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 ZNF286AQ9HBT8 521 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 ABCB10Q9NRK6 738 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 CALYQ9NYX4 217 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 KCNIP1Q9NZI2 227 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 ONECUT1Q9UBC0 465 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 UBE2J1Q9Y385 318 aaPredicted RBP7.67□□□□□ -1.18
DDX55-208ENST00000541259 OTOGQ6ZRI0 2925 aa7.67□□□□□ -1.18
DDX55-208ENST00000541259 IGHV2-70DA0A0C4DH43 119 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 KIR2DS1A0A191URI9 304 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 KBTBD11-OT1A0A1B0GTJ5 212 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 LINC00854A0A1B0GVQ3 168 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 ANKRD20A5PA0PJZ0 165 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 FAM172BPA6NC97 362 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 ZNF729A6NN14 1252 aaPredicted RBP7.66□□□□□ -1.18
DDX55-208ENST00000541259 B4DSR2 109 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 NPIPB11E5RHQ5 1161 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 M0QYG6 137 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 SDCBPO00560 298 aaPredicted RBP7.66□□□□□ -1.18
DDX55-208ENST00000541259 FABP7O15540 132 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 CD3DP04234 171 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 LIPFP07098 398 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 MSMBP08118 114 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 ZNF728P0DKX0 622 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 DVL1P1P54792 670 aaPredicted RBP7.66□□□□□ -1.18
DDX55-208ENST00000541259 KLF9Q13886 244 aaPredicted RBP7.66□□□□□ -1.18
DDX55-208ENST00000541259 FAAP20Q6NZ36 180 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 Q6ZS49 121 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 MOB1BQ7L9L4 216 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 Q8N7P7 452 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 LINC01356Q8N9X3 169 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 TMEM229BQ8NBD8 167 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 OR52L2PQ8NGH6 319 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 OR4D10Q8NGI6 311 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 IL1F10Q8WWZ1 152 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 CCDC32Q9BV29 185 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 TINAGL1Q9GZM7 467 aaPredicted RBP7.66□□□□□ -1.18
DDX55-208ENST00000541259 TAS2R3Q9NYW6 316 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 IDI2-AS1Q9NZ38 188 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 LPAR3Q9UBY5 353 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 OPN4Q9UHM6 478 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 ANXA10Q9UJ72 324 aa7.66□□□□□ -1.18
DDX55-208ENST00000541259 C17orf98A8MV24 154 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 F2RL2O00254 374 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 BET1O15155 118 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 SPINT2O43291 252 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 ENSAO43768 121 aaKnown RBP7.65□□□□□ -1.18
DDX55-208ENST00000541259 TGFAP01135 160 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 IGHV3-7P01780 117 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 NFYBP25208 207 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 HRH1P35367 487 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 KIR2DS4P43632 304 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 RFX2P48378 723 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms