RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 PPP1R35Q8TAP8 253 aa7.99□□□□□ -1.13
PAAF1-209ENST00000540659 PSMG3-AS1Q96PY0 264 aa7.99□□□□□ -1.13
PAAF1-209ENST00000540659 OR2A7Q96R45 310 aa7.99□□□□□ -1.13
PAAF1-209ENST00000540659 DHRS9Q9BPW9 319 aa7.99□□□□□ -1.13
PAAF1-209ENST00000540659 TMEM246Q9BRR3 403 aa7.99□□□□□ -1.13
PAAF1-209ENST00000540659 CABLES2Q9BTV7 478 aa7.99□□□□□ -1.13
PAAF1-209ENST00000540659 RSRP1Q9BUV0 290 aa7.99□□□□□ -1.13
PAAF1-209ENST00000540659 SLC5A7Q9GZV3 580 aa7.99□□□□□ -1.13
PAAF1-209ENST00000540659 DNTTIP1Q9H147 329 aa7.99□□□□□ -1.13
PAAF1-209ENST00000540659 NAA60Q9H7X0 242 aa7.99□□□□□ -1.13
PAAF1-209ENST00000540659 METTL8Q9H825 291 aaKnown RBP7.99□□□□□ -1.13
PAAF1-209ENST00000540659 SAP30LQ9HAJ7 183 aa7.99□□□□□ -1.13
PAAF1-209ENST00000540659 CCL28Q9NRJ3 127 aa7.99□□□□□ -1.13
PAAF1-209ENST00000540659 PCDHB10Q9UN67 800 aa7.99□□□□□ -1.13
PAAF1-209ENST00000540659 HSPB11Q9Y547 144 aa7.99□□□□□ -1.13
PAAF1-209ENST00000540659 RBM7Q9Y580 266 aaKnown RBP7.99□□□□□ -1.13
PAAF1-209ENST00000540659 ADGRG4Q8IZF6 3080 aa7.99□□□□□ -1.13
PAAF1-209ENST00000540659 TANC2Q9HCD6 1990 aa7.99□□□□□ -1.13
PAAF1-209ENST00000540659 FXYD6-FXYD2A0A087WZ82 144 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 TRBV6-7A0A0A0MS04 114 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 IGHV3-43A0A0B4J1X8 118 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 A0A1B0GW55 424 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 OOEPA6NGQ2 149 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 PHF1O43189 567 aaPredicted RBP7.98□□□□□ -1.13
PAAF1-209ENST00000540659 TNFSF12O43508 249 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 CLDN1O95832 211 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 CD55P08174 381 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 OR5AC1P0C628 307 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 DUX4L2P0CJ85 424 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 DUX4L3P0CJ86 424 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 DUX4L4P0CJ87 422 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 DUX4L5P0CJ88 424 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 DUX4L6P0CJ89 424 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 DUX4L7P0CJ90 424 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 IGHV3-43DP0DP04 118 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 SELLP14151 372 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 RPS2P15880 293 aaKnown RBP7.98□□□□□ -1.13
PAAF1-209ENST00000540659 SSTR2P30874 369 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 IL2RGP31785 369 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 CFHR2P36980 270 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 CEACAM6P40199 344 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 UCP3P55916 312 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 EDDM3BP56851 147 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 IFITM2Q01629 132 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 TFF3Q07654 80 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 CRYBG3Q68DQ2 2970 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 LAMTOR1Q6IAA8 161 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 DUX4L9Q6RFH8 374 aaPredicted RBP7.98□□□□□ -1.13
PAAF1-209ENST00000540659 ZNF818PQ6ZRF7 136 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 H1FOOQ8IZA3 346 aaPredicted RBP7.98□□□□□ -1.13
PAAF1-209ENST00000540659 C1orf87Q8N0U7 546 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 GAPTQ8N292 157 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 OR52L2PQ8NGH6 319 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 OR13A1Q8NGR1 328 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 ITLN2Q8WWU7 325 aaPredicted RBP7.98□□□□□ -1.13
PAAF1-209ENST00000540659 RTN4IP1Q8WWV3 396 aaPredicted RBP7.98□□□□□ -1.13
PAAF1-209ENST00000540659 SNX22Q96L94 193 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 GPHA2Q96T91 129 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 CCL13Q99616 98 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 DCTN5Q9BTE1 182 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 SHARPINQ9H0F6 387 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 RAB9BQ9NP90 201 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 SLC2A9Q9NRM0 540 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 MBNL3Q9NUK0 354 aaKnown RBP7.98□□□□□ -1.13
PAAF1-209ENST00000540659 RDH8Q9NYR8 311 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 COMMD9Q9P000 198 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 DUX4Q9UBX2 424 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 OPN4Q9UHM6 478 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 KCNS2Q9ULS6 477 aa7.98□□□□□ -1.13
PAAF1-209ENST00000540659 KLF2Q9Y5W3 355 aaPredicted RBP7.98□□□□□ -1.13
PAAF1-209ENST00000540659 TRAV14DV4A0A0A6YYC5 116 aa7.97□□□□□ -1.13
PAAF1-209ENST00000540659 DBX1A6NMT0 343 aa7.97□□□□□ -1.13
PAAF1-209ENST00000540659 C12orf77C9JDV5 145 aa7.97□□□□□ -1.13
PAAF1-209ENST00000540659 GPR31O00270 319 aa7.97□□□□□ -1.13
PAAF1-209ENST00000540659 TUSC2O75896 110 aa7.97□□□□□ -1.13
PAAF1-209ENST00000540659 ADH4P08319 380 aa7.97□□□□□ -1.13
PAAF1-209ENST00000540659 GNRHRP30968 328 aa7.97□□□□□ -1.13
PAAF1-209ENST00000540659 SSTR5P35346 364 aa7.97□□□□□ -1.13
PAAF1-209ENST00000540659 KCNJ3P48549 501 aa7.97□□□□□ -1.13
PAAF1-209ENST00000540659 LGALSLQ3ZCW2 172 aaPredicted RBP7.97□□□□□ -1.13
PAAF1-209ENST00000540659 ZNF672Q499Z4 452 aaPredicted RBP7.97□□□□□ -1.13
PAAF1-209ENST00000540659 C6orf183Q5T699 404 aa7.97□□□□□ -1.13
PAAF1-209ENST00000540659 FAM53AQ6NSI3 398 aaPredicted RBP7.97□□□□□ -1.13
PAAF1-209ENST00000540659 LPCAT3Q6P1A2 487 aa7.97□□□□□ -1.13
PAAF1-209ENST00000540659 MEX3BQ6ZN04 569 aaKnown RBP7.97□□□□□ -1.13
PAAF1-209ENST00000540659 TBC1D26Q86UD7 250 aa7.97□□□□□ -1.13
PAAF1-209ENST00000540659 LDLRAD3Q86YD5 345 aa7.97□□□□□ -1.13
PAAF1-209ENST00000540659 MUC15Q8N387 334 aa7.97□□□□□ -1.13
PAAF1-209ENST00000540659 OR10V1Q8NGI7 309 aa7.97□□□□□ -1.13
PAAF1-209ENST00000540659 ANGPTL6Q8NI99 470 aa7.97□□□□□ -1.13
PAAF1-209ENST00000540659 Q8TCH9 128 aa7.97□□□□□ -1.13
PAAF1-209ENST00000540659 CCL17Q92583 94 aa7.97□□□□□ -1.13
PAAF1-209ENST00000540659 GAFA1Q96PS6 74 aa7.97□□□□□ -1.13
PAAF1-209ENST00000540659 VRK1Q99986 396 aaPredicted RBP7.97□□□□□ -1.13
PAAF1-209ENST00000540659 ZNF665Q9H7R5 613 aa7.97□□□□□ -1.13
PAAF1-209ENST00000540659 SEBOXQ9HB31 216 aaPredicted RBP7.97□□□□□ -1.13
PAAF1-209ENST00000540659 KCNIP3Q9Y2W7 256 aa7.97□□□□□ -1.13
PAAF1-209ENST00000540659 MAB21L2Q9Y586 359 aa7.97□□□□□ -1.13
PAAF1-209ENST00000540659 UNC79Q9P2D8 2635 aa7.96□□□□□ -1.14
PAAF1-209ENST00000540659 A0A0B4J2A0 478 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms