RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 MRPL30Q8TCC3 161 aaKnown RBP12.08□□□□□ -0.48
UBE3B-212ENST00000540230 LPAR5Q9H1C0 372 aa12.08□□□□□ -0.48
UBE3B-212ENST00000540230 RANBP3Q9H6Z4 567 aaPredicted RBP12.08□□□□□ -0.48
UBE3B-212ENST00000540230 TRAPPC2LQ9UL33 140 aa12.08□□□□□ -0.48
UBE3B-212ENST00000540230 SDCBPO00560 298 aaPredicted RBP12.07□□□□□ -0.48
UBE3B-212ENST00000540230 BPNT1O95861 308 aa12.07□□□□□ -0.48
UBE3B-212ENST00000540230 PSMB9P28065 219 aa12.07□□□□□ -0.48
UBE3B-212ENST00000540230 PRR18Q8N4B5 295 aa12.07□□□□□ -0.48
UBE3B-212ENST00000540230 OR51D1Q8NGF3 324 aa12.07□□□□□ -0.48
UBE3B-212ENST00000540230 OR1L1Q8NH94 360 aa12.07□□□□□ -0.48
UBE3B-212ENST00000540230 KCNG3Q8TAE7 436 aa12.07□□□□□ -0.48
UBE3B-212ENST00000540230 FAAP24Q9BTP7 215 aa12.07□□□□□ -0.48
UBE3B-212ENST00000540230 NPFFR1Q9GZQ6 430 aa12.07□□□□□ -0.48
UBE3B-212ENST00000540230 GFOD1Q9NXC2 390 aa12.07□□□□□ -0.48
UBE3B-212ENST00000540230 PITPNC1Q9UKF7 332 aa12.07□□□□□ -0.48
UBE3B-212ENST00000540230 A0A1W2PPI3 338 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 CCRL2O00421 344 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 SLC31A2O15432 143 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 SOCS1O15524 211 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 HBZP02008 142 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 GLAP06280 429 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 ARSBP15848 533 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 CEACAM3P40198 252 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 BLCAPP62952 87 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 PRR31Q5SQ13 230 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 HES5Q5TA89 166 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 TOMM40LQ969M1 308 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 RPEQ96AT9 228 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 YTHDF1Q9BYJ9 559 aaKnown RBP12.06□□□□□ -0.48
UBE3B-212ENST00000540230 ZNF696Q9H7X3 374 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 MBNL3Q9NUK0 354 aaKnown RBP12.06□□□□□ -0.48
UBE3B-212ENST00000540230 LRRC42Q9Y546 428 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 V9GY05 133 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 MGAM2Q2M2H8 2515 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 TRDV1A0A1B0GX56 115 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 CA11O75493 328 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 RAB11BQ15907 218 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 TMEM95Q3KNT9 176 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 C22orf42Q6IC83 251 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 ZNF773Q6PK81 442 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 NR2C2APQ86WQ0 139 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 Q8N2B8 174 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 OR10V1Q8NGI7 309 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 OR52M1Q8NGK5 317 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 OR2T6Q8NHC8 308 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 CFHR4Q92496 578 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 CREB3L1Q96BA8 519 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 NEDD4LQ96PU5 975 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 TAF9BQ9HBM6 251 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 SERTAD4Q9NUC0 356 aa12.06□□□□□ -0.48
UBE3B-212ENST00000540230 AMMECR1Q9Y4X0 333 aaPredicted RBP12.06□□□□□ -0.48
UBE3B-212ENST00000540230 SMIM30A4D0T7 59 aa12.05□□□□□ -0.48
UBE3B-212ENST00000540230 FOXI3A8MTJ6 420 aaPredicted RBP12.05□□□□□ -0.48
UBE3B-212ENST00000540230 TIMM23O14925 209 aa12.05□□□□□ -0.48
UBE3B-212ENST00000540230 LDLRAD4O15165 306 aa12.05□□□□□ -0.48
UBE3B-212ENST00000540230 BLVRBP30043 206 aaPredicted RBP12.05□□□□□ -0.48
UBE3B-212ENST00000540230 BRS3P32247 399 aa12.05□□□□□ -0.48
UBE3B-212ENST00000540230 MADCAM1Q13477 382 aa12.05□□□□□ -0.48
UBE3B-212ENST00000540230 GNMTQ14749 295 aa12.05□□□□□ -0.48
UBE3B-212ENST00000540230 C6orf183Q5T699 404 aa12.05□□□□□ -0.48
UBE3B-212ENST00000540230 SLC16A12Q6ZSM3 486 aa12.05□□□□□ -0.48
UBE3B-212ENST00000540230 OR2W3Q7Z3T1 314 aa12.05□□□□□ -0.48
UBE3B-212ENST00000540230 KLHDC1Q8N7A1 406 aa12.05□□□□□ -0.48
UBE3B-212ENST00000540230 C11orf44Q8N8P7 122 aa12.05□□□□□ -0.48
UBE3B-212ENST00000540230 ZNF439Q8NDP4 499 aa12.05□□□□□ -0.48
UBE3B-212ENST00000540230 OR10X1Q8NGY0 326 aa12.05□□□□□ -0.48
UBE3B-212ENST00000540230 OR56B4Q8NH76 319 aa12.05□□□□□ -0.48
UBE3B-212ENST00000540230 FAM3DQ96BQ1 224 aa12.05□□□□□ -0.48
UBE3B-212ENST00000540230 RBMXL1Q96E39 390 aaKnown RBP12.05□□□□□ -0.48
UBE3B-212ENST00000540230 HDHD3Q9BSH5 251 aaPredicted RBP12.05□□□□□ -0.48
UBE3B-212ENST00000540230 WNK1Q9H4A3 2382 aa12.05□□□□□ -0.48
UBE3B-212ENST00000540230 VWFP04275 2813 aa12.04□□□□□ -0.48
UBE3B-212ENST00000540230 A0A0B4J203 849 aa12.04□□□□□ -0.48
UBE3B-212ENST00000540230 TRAV1-2A0A0B4J238 106 aa12.04□□□□□ -0.48
UBE3B-212ENST00000540230 SH2D7A6NKC9 451 aaPredicted RBP12.04□□□□□ -0.48
UBE3B-212ENST00000540230 FAM90A9PA6NNJ1 464 aa12.04□□□□□ -0.48
UBE3B-212ENST00000540230 OOSP1A8MZH6 123 aa12.04□□□□□ -0.48
UBE3B-212ENST00000540230 REG1BP48304 166 aa12.04□□□□□ -0.48
UBE3B-212ENST00000540230 ZNF134P52741 427 aa12.04□□□□□ -0.48
UBE3B-212ENST00000540230 TMEM50BP56557 158 aa12.04□□□□□ -0.48
UBE3B-212ENST00000540230 C2orf76Q3KRA6 126 aa12.04□□□□□ -0.48
UBE3B-212ENST00000540230 FAM89BQ8N5H3 189 aa12.04□□□□□ -0.48
UBE3B-212ENST00000540230 LINC00311Q8N616 119 aa12.04□□□□□ -0.48
UBE3B-212ENST00000540230 DRAM1Q8N682 238 aa12.04□□□□□ -0.48
UBE3B-212ENST00000540230 CAPSLQ8WWF8 208 aa12.04□□□□□ -0.48
UBE3B-212ENST00000540230 SLC25A33Q9BSK2 321 aa12.04□□□□□ -0.48
UBE3B-212ENST00000540230 TMEM272A0A1B0GTI8 110 aa12.03□□□□□ -0.48
UBE3B-212ENST00000540230 HSD17B6O14756 317 aa12.03□□□□□ -0.48
UBE3B-212ENST00000540230 SPINT2O43291 252 aa12.03□□□□□ -0.48
UBE3B-212ENST00000540230 AMY1AP04745 511 aa12.03□□□□□ -0.48
UBE3B-212ENST00000540230 AMY2AP04746 511 aa12.03□□□□□ -0.48
UBE3B-212ENST00000540230 SNRNP70P08621 437 aaKnown RBP12.03□□□□□ -0.48
UBE3B-212ENST00000540230 MNDAP41218 407 aa12.03□□□□□ -0.48
UBE3B-212ENST00000540230 VEGFCP49767 419 aa12.03□□□□□ -0.48
UBE3B-212ENST00000540230 CT45A1Q5HYN5 189 aa12.03□□□□□ -0.48
UBE3B-212ENST00000540230 CCDC144NLQ6NUI1 221 aa12.03□□□□□ -0.48
UBE3B-212ENST00000540230 OR52L2PQ8NGH6 319 aa12.03□□□□□ -0.48
UBE3B-212ENST00000540230 CT45A3Q8NHU0 189 aa12.03□□□□□ -0.48
UBE3B-212ENST00000540230 FCGR1BQ92637 280 aa12.03□□□□□ -0.48
UBE3B-212ENST00000540230 RBM14Q96PK6 669 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms