RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ZNF324BQ6AW86 544 aaPredicted RBP11.94□□□□□ -0.5
UBE3B-210ENST00000539599 IL22RA1Q8N6P7 574 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 RNASE11Q8TAA1 199 aaKnown RBP11.94□□□□□ -0.5
UBE3B-210ENST00000539599 LINC00470Q9BZP3 86 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 OR14J1Q9UGF5 321 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 RNF150Q9ULK6 438 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 KCNS2Q9ULS6 477 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 MMP24Q9Y5R2 645 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 URGCP-MRPS24S4R325 110 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 CADP27708 2225 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 WDR1O75083 606 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 SS18L1O75177 396 aaPredicted RBP11.94□□□□□ -0.5
UBE3B-210ENST00000539599 LMO1P25800 156 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 UCP1P25874 307 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 RND3P61587 244 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 ARL16Q0P5N6 197 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 OR10J5Q8NHC4 309 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 PLEKHF2Q9H8W4 249 aa11.94□□□□□ -0.5
UBE3B-210ENST00000539599 MRPS18CQ9Y3D5 142 aaKnown RBP11.94□□□□□ -0.5
UBE3B-210ENST00000539599 TNFSF15O95150 251 aa11.93□□□□□ -0.5
UBE3B-210ENST00000539599 GRPP07492 148 aa11.93□□□□□ -0.5
UBE3B-210ENST00000539599 FGF8P55075 233 aaPredicted RBP11.93□□□□□ -0.5
UBE3B-210ENST00000539599 ZNF826PQ6ZT77 177 aa11.93□□□□□ -0.5
UBE3B-210ENST00000539599 TECTBQ96PL2 329 aa11.93□□□□□ -0.5
UBE3B-210ENST00000539599 SLC35B3Q9H1N7 401 aa11.93□□□□□ -0.5
UBE3B-210ENST00000539599 RNF115Q9Y4L5 304 aa11.93□□□□□ -0.5
UBE3B-210ENST00000539599 RBM7Q9Y580 266 aaKnown RBP11.93□□□□□ -0.5
UBE3B-210ENST00000539599 WNT9BO14905 357 aa11.93□□□□□ -0.5
UBE3B-210ENST00000539599 DEGS1O15121 323 aa11.93□□□□□ -0.5
UBE3B-210ENST00000539599 PITX3O75364 302 aa11.93□□□□□ -0.5
UBE3B-210ENST00000539599 SP1P08047 785 aa11.93□□□□□ -0.5
UBE3B-210ENST00000539599 METTL15P1P0C7V9 234 aa11.93□□□□□ -0.5
UBE3B-210ENST00000539599 CD59P13987 128 aa11.93□□□□□ -0.5
UBE3B-210ENST00000539599 VDAC1P21796 283 aa11.93□□□□□ -0.5
UBE3B-210ENST00000539599 PTAFRP25105 342 aa11.93□□□□□ -0.5
UBE3B-210ENST00000539599 F2RP25116 425 aa11.93□□□□□ -0.5
UBE3B-210ENST00000539599 HOXA1P49639 335 aaPredicted RBP11.93□□□□□ -0.5
UBE3B-210ENST00000539599 ID3Q02535 119 aa11.93□□□□□ -0.5
UBE3B-210ENST00000539599 THNSL2Q86YJ6 484 aa11.93□□□□□ -0.5
UBE3B-210ENST00000539599 OR5A2Q8NGI9 324 aa11.93□□□□□ -0.5
UBE3B-210ENST00000539599 CACNG5Q9UF02 275 aa11.93□□□□□ -0.5
UBE3B-210ENST00000539599 UCP2P55851 309 aa11.92□□□□□ -0.5
UBE3B-210ENST00000539599 SSX7Q7RTT5 188 aa11.92□□□□□ -0.5
UBE3B-210ENST00000539599 CMTM1Q8IZ96 169 aa11.92□□□□□ -0.5
UBE3B-210ENST00000539599 TPRX1Q8N7U7 411 aa11.92□□□□□ -0.5
UBE3B-210ENST00000539599 CYB561D1Q8N8Q1 229 aa11.92□□□□□ -0.5
UBE3B-210ENST00000539599 OR2W1Q9Y3N9 320 aa11.92□□□□□ -0.5
UBE3B-210ENST00000539599 CDX4O14627 284 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-210ENST00000539599 HSPA12AO43301 675 aa11.92□□□□□ -0.5
UBE3B-210ENST00000539599 AGFG2O95081 481 aa11.92□□□□□ -0.5
UBE3B-210ENST00000539599 OR2H2O95918 312 aa11.92□□□□□ -0.5
UBE3B-210ENST00000539599 NANPQ8TBE9 248 aa11.92□□□□□ -0.5
UBE3B-210ENST00000539599 PLPPR2Q96GM1 343 aa11.92□□□□□ -0.5
UBE3B-210ENST00000539599 WDYHV1Q96HA8 205 aa11.92□□□□□ -0.5
UBE3B-210ENST00000539599 RNF122Q9H9V4 155 aa11.92□□□□□ -0.5
UBE3B-210ENST00000539599 ADGRG4Q8IZF6 3080 aa11.92□□□□□ -0.5
UBE3B-210ENST00000539599 KIR2DS1A0A191URI9 304 aa11.91□□□□□ -0.5
UBE3B-210ENST00000539599 SERPINE2P07093 398 aa11.91□□□□□ -0.5
UBE3B-210ENST00000539599 NQO2P16083 231 aa11.91□□□□□ -0.5
UBE3B-210ENST00000539599 KIR2DS4P43632 304 aa11.91□□□□□ -0.5
UBE3B-210ENST00000539599 RPS23P62266 143 aaKnown RBP11.91□□□□□ -0.5
UBE3B-210ENST00000539599 GNG3P63215 75 aa11.91□□□□□ -0.5
UBE3B-210ENST00000539599 HLA-DRB3P79483 266 aa11.91□□□□□ -0.5
UBE3B-210ENST00000539599 KIR2DS1Q14954 304 aa11.91□□□□□ -0.5
UBE3B-210ENST00000539599 TESK1Q15569 626 aa11.91□□□□□ -0.5
UBE3B-210ENST00000539599 MPV17LQ2QL34 196 aa11.91□□□□□ -0.5
UBE3B-210ENST00000539599 SOHLH1Q5JUK2 328 aa11.91□□□□□ -0.5
UBE3B-210ENST00000539599 ALKBH2Q6NS38 261 aa11.91□□□□□ -0.5
UBE3B-210ENST00000539599 SCCPDHQ8NBX0 429 aa11.91□□□□□ -0.5
UBE3B-210ENST00000539599 OR51I2Q9H344 312 aa11.91□□□□□ -0.5
UBE3B-210ENST00000539599 GVINP1Q7Z2Y8 2422 aa11.91□□□□□ -0.5
UBE3B-210ENST00000539599 RBFOX3A6NFN3 312 aa11.91□□□□□ -0.5
UBE3B-210ENST00000539599 IGKV1-5P01602 117 aa11.91□□□□□ -0.5
UBE3B-210ENST00000539599 ZNF14P17017 642 aaPredicted RBP11.91□□□□□ -0.5
UBE3B-210ENST00000539599 Q6P435 159 aa11.91□□□□□ -0.5
UBE3B-210ENST00000539599 C15orf54Q8N8G6 183 aa11.91□□□□□ -0.5
UBE3B-210ENST00000539599 TRAPPC2LQ9UL33 140 aa11.91□□□□□ -0.5
UBE3B-210ENST00000539599 KIAA1324LA8MWY0 1029 aaPredicted RBP11.9□□□□□ -0.5
UBE3B-210ENST00000539599 C1orf196B1AJZ1 125 aa11.9□□□□□ -0.5
UBE3B-210ENST00000539599 HMGB3O15347 200 aaKnown RBP11.9□□□□□ -0.5
UBE3B-210ENST00000539599 ARR3P36575 388 aa11.9□□□□□ -0.5
UBE3B-210ENST00000539599 RAB5BP61020 215 aa11.9□□□□□ -0.5
UBE3B-210ENST00000539599 ZNF266Q14584 549 aa11.9□□□□□ -0.5
UBE3B-210ENST00000539599 EIF2S3LQ2VIR3 472 aaKnown RBP11.9□□□□□ -0.5
UBE3B-210ENST00000539599 NRN1LQ496H8 165 aa11.9□□□□□ -0.5
UBE3B-210ENST00000539599 SPINK9Q5DT21 86 aa11.9□□□□□ -0.5
UBE3B-210ENST00000539599 HES3Q5TGS1 186 aa11.9□□□□□ -0.5
UBE3B-210ENST00000539599 H1FOOQ8IZA3 346 aaPredicted RBP11.9□□□□□ -0.5
UBE3B-210ENST00000539599 FAM185AQ8N0U4 392 aa11.9□□□□□ -0.5
UBE3B-210ENST00000539599 ZNF808Q8N4W9 903 aaPredicted RBP11.9□□□□□ -0.5
UBE3B-210ENST00000539599 IER2Q9BTL4 223 aa11.9□□□□□ -0.5
UBE3B-210ENST00000539599 DDA1Q9BW61 102 aa11.9□□□□□ -0.5
UBE3B-210ENST00000539599 STRAPQ9Y3F4 350 aaKnown RBP11.9□□□□□ -0.5
UBE3B-210ENST00000539599 KALRNO60229 2985 aa11.9□□□□□ -0.5
UBE3B-210ENST00000539599 H0Y980 276 aa11.9□□□□□ -0.5
UBE3B-210ENST00000539599 RAB5AP20339 215 aa11.9□□□□□ -0.5
UBE3B-210ENST00000539599 MEOX2P50222 304 aa11.9□□□□□ -0.5
UBE3B-210ENST00000539599 FABP9Q0Z7S8 132 aa11.9□□□□□ -0.5
UBE3B-210ENST00000539599 SLC10A1Q14973 349 aa11.9□□□□□ -0.5
UBE3B-210ENST00000539599 NCMAPQ5T1S8 102 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms